ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28l02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase 452 e-124
2ref|XM_472023.1| Oryza sativa (japonica cultivar-group), predic... 182 8e-43
3gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-bind... 182 8e-43
4dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 8e-43
5emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4,... 101 2e-18
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7gb|AY104504.1| Zea mays PCO127462 mRNA sequence 101 2e-18
8ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin... 72 2e-09
9emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
10dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 62 2e-06
11ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
12gb|AY389680.1| Hyacinthus orientalis peptidylprolyl isomerase (F... 56 1e-04
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
14dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
15dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
16ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.030
17dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
18gb|AY112186.1| Zea mays CL38095_1 mRNA sequence 48 0.030
19gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence 46 0.12
20gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome... 44 0.48
21gb|AC160937.1| Mus musculus BAC clone RP23-123M3 from chromosome... 44 0.48
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
23dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
24dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
25emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on ch... 42 1.9
26gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 42 1.9
27gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomi... 40 7.4
28gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 40 7.4
29gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.4
30dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.4
31emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.4
32gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.4
33gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.4
34emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
35emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chr... 40 7.4 
>emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase
          Length = 1999

 Score =  452 bits (228), Expect = e-124
 Identities = 295/317 (93%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                        
Query: 228  ccgtcacgcggtgctgtcgatggccataggctgtgcgtcctgctgcttcccggcggcatt 287
            ||||||||||||||||||| ||||||||||||| || |||||||   |||||||||| ||
Sbjct: 1791 ccgtcacgcggtgctgtcgctggccataggctgcgcttcctgct---tcccggcggcgtt 1735

                                                                        
Query: 288  ctccgtcttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgta 347
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1734 ctccgtcttcctccatttggcgaacatgttgccgtagaacttggcatccctcttgttgta 1675

                                                                        
Query: 348  ctccctcagcttgtccttcaacgccttgtacgcaaccttgacctccctgttgtctggatc 407
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 1674 ctccctcagcttgtccttcaacgccttgtacgcaaccttcacctccctgttgtccgggtc 1615

                                                                        
Query: 408  gatctccagagccttcttgatatctagctctgccagctccagatccacgagttgggtgta 467
            ||||||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||
Sbjct: 1614 gatctccagagccttcttgatatctagttctgccagttccagatccacgagctcggtgta 1555

                                                                        
Query: 468  cgcctgcgccctcctgtacagagccttgacgttcgtgctctncagctccaaaaccttggt 527
            |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | 
Sbjct: 1554 cgcctgcgccctccggtacagagccttgacgtttgtgctctccagctccaaaacctttga 1495

                             
Query: 528  gcagagcttctctgctt 544
            |||||  ||||||||||
Sbjct: 1494 gcagattttctctgctt 1478



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   atcaaggaacgcagcccatcacagacga 73
            ||||||| |||||||| |||||||||||
Sbjct: 1920 atcaaggcacgcagccgatcacagacga 1893
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>ref|XM_472023.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1758

 Score =  182 bits (92), Expect = 8e-43
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  cttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccct 353
            |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1683 cttcctccatttcgcgaacatgttgccgtagaacttggcgtctctcttgttgtactcctt 1624

                                                                        
Query: 354  cagcttgtccttcaacgccttgtacgcaaccttgacctccctgttgtctggatcgatctc 413
             | ||| |||||||| | ||| ||| | | ||| || ||||||||||| ||||| |||||
Sbjct: 1623 gatcttctccttcaatgtcttatacaccatcttcacatccctgttgtcaggatcaatctc 1564

                                                                        
Query: 414  cagagccttcttgatatctagctctgccagctccagatccacgagttgggtgtacgcctg 473
            ||| || ||||||| ||| | |||||| || ||||||||  | || |   |||| |||||
Sbjct: 1563 cagtgctttcttgacatccaactctgctagttccagatcagcaagctcaatgtatgcctg 1504

                                                                        
Query: 474  cgccctcctgtacagagccttgacgttcgtgctctncagctccaaaaccttggtgcagag 533
            || ||| |||||||  ||||| || || ||||||| ||| ||||||||||||||||||||
Sbjct: 1503 cgtccttctgtacaaggcctttacatttgtgctctccagttccaaaaccttggtgcagag 1444

                       
Query: 534  cttctctgctt 544
            |||||||||||
Sbjct: 1443 cttctctgctt 1433



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 241  ctgtcgatggccataggctgtgcgtcctgct 271
            ||||| ||||||||||||||||| |||||||
Sbjct: 1748 ctgtcaatggccataggctgtgcctcctgct 1718
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>gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-binding protein mRNA,
            complete cds
          Length = 2233

 Score =  182 bits (92), Expect = 8e-43
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  cttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccct 353
            |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1766 cttcctccatttcgcgaacatgttgccgtagaacttggcgtctctcttgttgtactcctt 1707

                                                                        
Query: 354  cagcttgtccttcaacgccttgtacgcaaccttgacctccctgttgtctggatcgatctc 413
             | ||| |||||||| | ||| ||| | | ||| || ||||||||||| ||||| |||||
Sbjct: 1706 gatcttctccttcaatgtcttatacaccatcttcacatccctgttgtcaggatcaatctc 1647

                                                                        
Query: 414  cagagccttcttgatatctagctctgccagctccagatccacgagttgggtgtacgcctg 473
            ||| || ||||||| ||| | |||||| || ||||||||  | || |   |||| |||||
Sbjct: 1646 cagtgctttcttgacatccaactctgctagttccagatcagcaagctcaatgtatgcctg 1587

                                                                        
Query: 474  cgccctcctgtacagagccttgacgttcgtgctctncagctccaaaaccttggtgcagag 533
            || ||| |||||||  ||||| || || ||||||| ||| ||||||||||||||||||||
Sbjct: 1586 cgtccttctgtacaaggcctttacatttgtgctctccagttccaaaaccttggtgcagag 1527

                       
Query: 534  cttctctgctt 544
            |||||||||||
Sbjct: 1526 cttctctgctt 1516



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 241  ctgtcgatggccataggctgtgcgtcctgct 271
            ||||| ||||||||||||||||| |||||||
Sbjct: 1831 ctgtcaatggccataggctgtgcctcctgct 1801
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>dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123G09, full
            insert sequence
          Length = 2162

 Score =  182 bits (92), Expect = 8e-43
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294  cttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccct 353
            |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 1769 cttcctccatttcgcgaacatgttgccgtagaacttggcgtctctcttgttgtactcctt 1710

                                                                        
Query: 354  cagcttgtccttcaacgccttgtacgcaaccttgacctccctgttgtctggatcgatctc 413
             | ||| |||||||| | ||| ||| | | ||| || ||||||||||| ||||| |||||
Sbjct: 1709 gatcttctccttcaatgtcttatacaccatcttcacatccctgttgtcaggatcaatctc 1650

                                                                        
Query: 414  cagagccttcttgatatctagctctgccagctccagatccacgagttgggtgtacgcctg 473
            ||| || ||||||| ||| | |||||| || ||||||||  | || |   |||| |||||
Sbjct: 1649 cagtgctttcttgacatccaactctgctagttccagatcagcaagctcaatgtatgcctg 1590

                                                                        
Query: 474  cgccctcctgtacagagccttgacgttcgtgctctncagctccaaaaccttggtgcagag 533
            || ||| |||||||  ||||| || || ||||||| ||| ||||||||||||||||||||
Sbjct: 1589 cgtccttctgtacaaggcctttacatttgtgctctccagttccaaaaccttggtgcagag 1530

                       
Query: 534  cttctctgctt 544
            |||||||||||
Sbjct: 1529 cttctctgctt 1519



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 241  ctgtcgatggccataggctgtgcgtcctgct 271
            ||||| ||||||||||||||||| |||||||
Sbjct: 1834 ctgtcaatggccataggctgtgcctcctgct 1804
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>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07,
             complete sequence
          Length = 138383

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                         
Query: 294   cttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccct 353
             |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 74997 cttcctccatttcgcgaacatgttgccgtagaacttggcgtctctcttgttgtactcctt 75056

                            
Query: 354   cagcttgtccttcaa 368
              | ||| ||||||||
Sbjct: 75057 gatcttctccttcaa 75071



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 520   accttggtgcagagcttctctgctt 544
             |||||||||||||||||||||||||
Sbjct: 75886 accttggtgcagagcttctctgctt 75910



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 241   ctgtcgatggccataggctgtgcgtcctgct 271
             ||||| ||||||||||||||||| |||||||
Sbjct: 74835 ctgtcaatggccataggctgtgcctcctgct 74865
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                            
Query: 294      cttcctccatttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccct 353
                |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 16824566 cttcctccatttcgcgaacatgttgccgtagaacttggcgtctctcttgttgtactcctt 16824625

                               
Query: 354      cagcttgtccttcaa 368
                 | ||| ||||||||
Sbjct: 16824626 gatcttctccttcaa 16824640



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 520      accttggtgcagagcttctctgctt 544
                |||||||||||||||||||||||||
Sbjct: 16825455 accttggtgcagagcttctctgctt 16825479



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 241      ctgtcgatggccataggctgtgcgtcctgct 271
                ||||| ||||||||||||||||| |||||||
Sbjct: 16824404 ctgtcaatggccataggctgtgcctcctgct 16824434



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 529      cagagcttctctgctttttt 548
                ||||||||||||||||||||
Sbjct: 35036106 cagagcttctctgctttttt 35036087
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>gb|AY104504.1| Zea mays PCO127462 mRNA sequence
          Length = 2108

 Score =  101 bits (51), Expect = 2e-18
 Identities = 188/234 (80%)
 Strand = Plus / Minus

                                                                        
Query: 304  ttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactccctcagcttgtcc 363
            |||||||||||||||| |||||| ||||||||| |||||||||||||| | | ||| |||
Sbjct: 1792 ttggcgaacatgttgctgtagaatttggcgtccttcttgttgtactccttgatcttctcc 1733

                                                                        
Query: 364  ttcaacgccttgtacgcaaccttgacctccctgttgtctggatcgatctccagagccttc 423
            ||||    ||| ||  | | |||||| ||||||||||| |||||||| ||||| ||||| 
Sbjct: 1732 ttcaggatcttatattccaacttgacatccctgttgtcaggatcgatttccagtgccttt 1673

                                                                        
Query: 424  ttgatatctagctctgccagctccagatccacgagttgggtgtacgcctgcgccctcctg 483
            ||||||||   |||||| ||||| || ||  | |||||  |||| || ||| ||||||||
Sbjct: 1672 ttgatatcggcctctgctagctctaggtcagcaagttgaatgtaagcttgcaccctcctg 1613

                                                                  
Query: 484  tacagagccttgacgttcgtgctctncagctccaaaaccttggtgcagagcttc 537
            || ||||||||||| ||   ||| |  || |||| |||||||||||| ||||||
Sbjct: 1612 tagagagccttgacattttggctgtctagttccagaaccttggtgcaaagcttc 1559
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>ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin binding /
            peptidyl-prolyl cis-trans isomerase AT5G48570 mRNA,
            complete cds
          Length = 2130

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                        
Query: 310  aacatgttgccgtagaacttggcgtccctcttgttgtactccctcagcttgtccttcaac 369
            |||||||||| ||| ||||| || ||  ||||||| |||||  ||| ||| |||||||||
Sbjct: 1853 aacatgttgctgtaaaacttagcatctttcttgttatactctttcaccttctccttcaac 1794

                                                                        
Query: 370  gccttgtacgcaaccttgacctccctgttgtctggatcgatctccagagccttcttgata 429
              ||| ||  | | ||| |||||| |||||||||||||||| || ||||| |||||||||
Sbjct: 1793 ttcttatattctatcttcacctccttgttgtctggatcgatttcgagagctttcttgata 1734

                                    
Query: 430  tctagctctgccagctccagatcc 453
            || ||||| ||||| || ||||||
Sbjct: 1733 tcaagctcagccagatcaagatcc 1710
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>emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZC07 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1890

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                        
Query: 310  aacatgttgccgtagaacttggcgtccctcttgttgtactccctcagcttgtccttcaac 369
            |||||||||| ||| ||||| || ||  ||||||| |||||  ||| ||| |||||||||
Sbjct: 1725 aacatgttgctgtaaaacttagcatctttcttgttatactctttcaccttctccttcaac 1666

                                                                        
Query: 370  gccttgtacgcaaccttgacctccctgttgtctggatcgatctccagagccttcttgata 429
              ||| ||  | | ||| |||||| |||||||||||||||| || ||||| |||||||||
Sbjct: 1665 ttcttatattctatcttcacctccttgttgtctggatcgatttcgagagctttcttgata 1606

                                    
Query: 430  tctagctctgccagctccagatcc 453
            || ||||| ||||| || ||||||
Sbjct: 1605 tcaagctcagccagatcaagatcc 1582
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>dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15N18
          Length = 66084

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 395   tgttgtctggatcgatctccagagccttcttgatatctagctctgccagctccagatcc 453
             |||||||||||||||| || ||||| ||||||||||| ||||| ||||| || ||||||
Sbjct: 12197 tgttgtctggatcgatttcgagagctttcttgatatcaagctcagccagatcaagatcc 12255
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>ref|XM_483423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 304  ttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactcc 351
            ||||||||||| |||| |||||| ||||| ||| ||||||||||||||
Sbjct: 1765 ttggcgaacatattgctgtagaatttggcatccttcttgttgtactcc 1718
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>gb|AY389680.1| Hyacinthus orientalis peptidylprolyl isomerase (FKBP) mRNA, partial
           cds
          Length = 527

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 391 tccctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
           ||||||||||| ||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 136 tccctgttgtcaggatcaatctcgagggctttcttgatatcgagctctgcca 85
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 304      ttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactcc 351
                ||||||||||| |||| |||||| ||||| ||| ||||||||||||||
Sbjct: 26135336 ttggcgaacatattgctgtagaatttggcatccttcttgttgtactcc 26135289
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 304   ttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactcc 351
             ||||||||||| |||| |||||| ||||| ||| ||||||||||||||
Sbjct: 79267 ttggcgaacatattgctgtagaatttggcatccttcttgttgtactcc 79220
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>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full
            insert sequence
          Length = 2100

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 304  ttggcgaacatgttgccgtagaacttggcgtccctcttgttgtactcc 351
            ||||||||||| |||| |||||| ||||| ||| ||||||||||||||
Sbjct: 1765 ttggcgaacatattgctgtagaatttggcatccttcttgttgtactcc 1718
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>ref|XM_465763.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2341

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 391  tccctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
            ||||||||||||||||| || || || || ||||||||||| || |||||||
Sbjct: 1788 tccctgttgtctggatctatttctagtgctttcttgatatccagttctgcca 1737
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>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full
            insert sequence
          Length = 2341

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 391  tccctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
            ||||||||||||||||| || || || || ||||||||||| || |||||||
Sbjct: 1788 tccctgttgtctggatctatttctagtgctttcttgatatccagttctgcca 1737
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>gb|AY112186.1| Zea mays CL38095_1 mRNA sequence
          Length = 578

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 391 tccctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
           ||||||||||| ||||| || || ||||| ||||||||||||  ||||||||
Sbjct: 506 tccctgttgtcaggatctatttctagagctttcttgatatctgcctctgcca 557
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>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence
          Length = 2264

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 310  aacatgttgccgtagaacttggcgtccctcttgtt 344
            |||||||| ||||||||||| |||||| |||||||
Sbjct: 1846 aacatgttcccgtagaactttgcgtccttcttgtt 1812



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 373  ttgtacgcaaccttgacctccctgttgtctggatcgatctccagagccttctt 425
            |||||| ||| ||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 1783 ttgtactcaagcttcacatccctgttgtcaggatcaatctcaagagctttctt 1731
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>gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence
          Length = 166801

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 406    tcgatctccagagccttcttga 427
              ||||||||||||||||||||||
Sbjct: 103607 tcgatctccagagccttcttga 103586
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>gb|AC160937.1| Mus musculus BAC clone RP23-123M3 from chromosome 8, complete sequence
          Length = 212654

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 406    tcgatctccagagccttcttga 427
              ||||||||||||||||||||||
Sbjct: 167565 tcgatctccagagccttcttga 167544
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 393      cctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
                ||||||||||||||| || || || || ||||||||||| || |||||||
Sbjct: 17257317 cctgttgtctggatctatttctagtgctttcttgatatccagttctgcca 17257366
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>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0579G08
          Length = 164452

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 393   cctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
             ||||||||||||||| || || || || ||||||||||| || |||||||
Sbjct: 30000 cctgttgtctggatctatttctagtgctttcttgatatccagttctgcca 30049
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>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0048K16
          Length = 159891

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 393    cctgttgtctggatcgatctccagagccttcttgatatctagctctgcca 442
              ||||||||||||||| || || || || ||||||||||| || |||||||
Sbjct: 128084 cctgttgtctggatctatttctagtgctttcttgatatccagttctgcca 128133
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>emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on chromosome Xq22.1-23
            Contains the DSIPI gene for delta sleep inducing peptide,
            immunoreactor (DIP, GILZ, TSC-22R), the 5' end of a novel
            gene and two CpG islands, complete sequence
          Length = 83167

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 405  atcgatctccagagccttctt 425
            |||||||||||||||||||||
Sbjct: 6736 atcgatctccagagccttctt 6716
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 314     tgttgccgtagaacttggcgt 334
               |||||||||||||||||||||
Sbjct: 4829504 tgttgccgtagaacttggcgt 4829484
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>gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomic sequence, complete
             sequence
          Length = 77821

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   ggcaccacaagcaggagcagcaga 136
             |||||||||||||| |||||||||
Sbjct: 74033 ggcaccacaagcagcagcagcaga 74056
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cacaagcaggagcagcagaa 137
             ||||||||||||||||||||
Sbjct: 91224 cacaagcaggagcagcagaa 91243
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     gacgctgcagcgccgtcacg 235
               ||||||||||||||||||||
Sbjct: 4323738 gacgctgcagcgccgtcacg 4323757
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 398    tgtctggatcgatctccagagcct 421
              ||||||||||||| ||||||||||
Sbjct: 556810 tgtctggatcgatttccagagcct 556787
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   cagagcttctctgctttttt 548
             ||||||||||||||||||||
Sbjct: 67825 cagagcttctctgctttttt 67806
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 440     ccagctccagatccacgagt 459
               ||||||||||||||||||||
Sbjct: 4219653 ccagctccagatccacgagt 4219672
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     cctgctgcttcccggcggca 285
               ||||||||||||||||||||
Sbjct: 1208413 cctgctgcttcccggcggca 1208394
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   cagagcttctctgctttttt 548
             ||||||||||||||||||||
Sbjct: 95153 cagagcttctctgctttttt 95134
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>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete
              sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gcaaccttgacctccctgtt 398
              ||||||||||||||||||||
Sbjct: 104790 gcaaccttgacctccctgtt 104809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,099,857
Number of Sequences: 3902068
Number of extensions: 4099857
Number of successful extensions: 88195
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87897
Number of HSP's gapped (non-prelim): 295
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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