Clone Name	rbags28k24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK099867.1| Oryza sativa (japonica cultivar-group) cDNA clon...	549	e-153
2	gb|AY109130.1| Zea mays PCO125769 mRNA sequence	492	e-136
3	ref|NM_193723.1| Oryza sativa (japonica cultivar-group), predic...	394	e-106
4	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	258	2e-65
5	dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D...	258	2e-65
6	emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in...	46	0.15
7	emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c...	46	0.15
8	emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chr...	46	0.15
9	gb|AF138523.1|AF138523 HIV-1 p8c095-07 from USA envelope glycopr...	44	0.61
10	gb|U87293.1|U87293 Bulinus senegalensis clone SEN239M species-sp...	44	0.61
11	emb|BX004972.12| Zebrafish DNA sequence from clone CH211-166A6 i...	42	2.4
12	emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in...	42	2.4
13	emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on ch...	42	2.4
14	emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in...	42	2.4
15	gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, comple...	42	2.4
16	gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, comple...	42	2.4
17	ref|XM_687332.1| PREDICTED: Danio rerio similar to Putative euka...	42	2.4
18	gb|L22945.1|HIV1SE365A Human immunodeficiency virus type 1 (SE36...	42	2.4
19	ref|NM_122000.2| Arabidopsis thaliana unknown protein AT5G19930 ...	40	9.5
20	gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, c...	40	9.5
21	ref|XM_638972.1| Dictyostelium discoideum hypothetical protein (...	40	9.5
22	gb|BT014374.1| Lycopersicon esculentum clone 133662F, mRNA sequence	40	9.5
23	gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome...	40	9.5
24	emb|CR339051.6| Zebrafish DNA sequence from clone DKEY-223N8 in ...	40	9.5
25	gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's H...	40	9.5
26	emb|AJ302074.2|SPN302074 Streptococcus pneumoniae bacteriophage ...	40	9.5
27	gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell...	40	9.5
28	gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswel...	40	9.5
29	gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, comp...	40	9.5
30	gb|AC121493.1| Homo sapiens chromosome 3 clone RP11-88H12, compl...	40	9.5
31	gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complet...	40	9.5
32	gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, comp...	40	9.5
33	emb|BX833886.1|CNS0A1RS Arabidopsis thaliana Full-length cDNA Co...	40	9.5
34	emb|BX830437.1|CNS0A18F Arabidopsis thaliana Full-length cDNA Co...	40	9.5
35	gb|AC105422.3| Homo sapiens BAC clone RP11-707O8 from 2, complet...	40	9.5
36	gb|AC130823.4| Mus musculus BAC clone RP23-320F5 from chromosome...	40	9.5
37	gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complet...	40	9.5
38	gb|AY085046.1| Arabidopsis thaliana clone 12566 mRNA, complete s...	40	9.5
39	gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)...	40	9.5
40	gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16	40	9.5
41	dbj|AP002462.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	40	9.5
42	emb|AL359680.4|CNS05TEY Human chromosome 14 DNA sequence BAC R-7...	40	9.5
43	emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in...	40	9.5
44	gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 ...	40	9.5
45	gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, comple...	40	9.5
46	emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chr...	40	9.5
47	emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-9...	40	9.5

---

>dbj|AK099867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111E19, full
           insert sequence
          Length = 1424

 Score =  549 bits (277), Expect = e-153
 Identities = 495/568 (87%)
 Strand = Plus / Minus

                                                                       
Query: 116 aatgcacgcataagctgtaatcacagatgttagcagcacagacactgcattaacagcatc 175
           |||||||||||||||||||| | ||| |||||| |||||||| || |||||||| |||||
Sbjct: 941 aatgcacgcataagctgtaaccgcagttgttagtagcacagatacagcattaaccgcatc 882

                                                                       
Query: 176 attatcaaggatagtcattccagaaatcttggtgacggtaggtccccgtttactgaccac 235
           |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 881 attatccaggatagtcattccagaaatcttggtgactgtagggccccgtttactgaccac 822

                                                                       
Query: 236 ctttttcctaacactgcagtatccgctgaactgaagtgtggcacccagaaatgaatcaat 295
           ||| |||| ||||||||||||||| |||||||| |||||||||||||  | |||||||||
Sbjct: 821 cttcttccgaacactgcagtatccactgaactggagtgtggcacccaacactgaatcaat 762

                                                                       
Query: 296 tagactcccaagcaaaccagcagcagcagagataggtattactaggagctgttgaagcga 355
            ||||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||| | 
Sbjct: 761 cagactgccaagcaaaccagcagtagcagagatgggtattactagaagctgtcgaagagc 702

                                                                       
Query: 356 catatcaaaagaacaatcagctgtcatcagtccaacagcaacaaaagtcagaccaatggt 415
           ||  ||||| || || ||  | |||| ||||||||||  ||||||||||||||| ||| |
Sbjct: 701 cacgtcaaatgagcactccacagtcaacagtccaacaaaaacaaaagtcagacctatgat 642

                                                                       
Query: 416 tagaccacctgctgtggcagcaagaagtccttgtaaggtcactccaccatttgtaccttt 475
           ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 641 taggccacctgctgtggcagcaagaaggccttgtaaggtcactccaccgtttgtaccttt 582

                                                                       
Query: 476 cctgacaggcttnagggtagtgacaagccgtggttgttcatcactaagcacaccgatttc 535
           |||||||||||| || ||||| | ||| ||||| |||||||||||||||||||| | |||
Sbjct: 581 cctgacaggcttcagagtagtaataagacgtggctgttcatcactaagcacaccaagttc 522

                                                                       
Query: 536 agatgaccaagtgtctccattgcagcagcaataatggccaataatagcacctattatacc 595
            ||||||||||| |||||||||||||||||||| || ||||| ||  |||| || |||||
Sbjct: 521 ggatgaccaagtatctccattgcagcagcaatagtgaccaatgatgccaccaataatacc 462

                                                                       
Query: 596 agttataacctttgaaccatttgagtccaagcattgatcttgacccccagtcattatcgc 655
           |||||||||||||||  |||  ||||||| |||||||||||| || || |||||| | ||
Sbjct: 461 agttataacctttgactcatgggagtccaggcattgatcttgtcctccggtcattgttgc 402

                                       
Query: 656 caatacaataaccaatacagttgctatt 683
           |||||  || ||||||| ||| ||||||
Sbjct: 401 caatatgatgaccaatatagtagctatt 374

---

>gb|AY109130.1| Zea mays PCO125769 mRNA sequence
          Length = 757

 Score =  492 bits (248), Expect = e-136
 Identities = 477/551 (86%), Gaps = 2/551 (0%)
 Strand = Plus / Minus

                                                                       
Query: 102 ttctaaaagaagaaaatgcacgcataagctgtaatcacagatgttagcagcacagacact 161
           |||||||||| | |||||||  ||||||||||||  |||| ||||||||| | ||| |||
Sbjct: 655 ttctaaaagatgcaaatgcatacataagctgtaagtacagttgttagcagaatagatact 596

                                                                       
Query: 162 gcattaacagcatcattatcaaggatagtcattccagaaatcttggtgacggtaggtccc 221
           |||||||||||||| || || ||||||||||| ||||||||||| || || ||||| |||
Sbjct: 595 gcattaacagcatcgttgtccaggatagtcatcccagaaatctttgtaaccgtagggccc 536

                                                                       
Query: 222 cgtttactgaccacctttttcctaacactgcagtatccgctgaactgaagtgtggcaccc 281
           | ||| ||||||||||| |||| ||||||||| || || ||||| | |||||| || |||
Sbjct: 535 cttttgctgaccaccttcttccgaacactgcaatacccactgaattcaagtgtagctccc 476

                                                                       
Query: 282 agaaatgaatcaattagactcccaagcaaaccagcagcagcagagataggtattactagg 341
           || |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 475 agcaatgaatcaattagactcccaagcaaaccagctgcagcagagatgggtagtactagg 416

                                                                       
Query: 342 agctgt-tgaagcgacatatcaaaagaacaatcagctgtcatcagtccaacagcaacaaa 400
           |||||  ||| | | ||||||  ||||||| ||||| |||| |||||||||| |||| ||
Sbjct: 415 agctgcctgatg-gccatatcggaagaacattcagcagtcaacagtccaacaacaacgaa 357

                                                                       
Query: 401 agtcagaccaatggttagaccacctgctgtggcagcaagaagtccttgtaaggtcactcc 460
           ||| ||||||||| | || || ||| |||||||||||||||||||||||||||| ||| |
Sbjct: 356 agtgagaccaatgataaggcctcctcctgtggcagcaagaagtccttgtaaggtgactgc 297

                                                                       
Query: 461 accatttgtacctttcctgacaggcttnagggtagtgacaagccgtggttgttcatcact 520
           |||||||||||| |||||||||||||| ||||  || | ||||| ||||||||||| |||
Sbjct: 296 accatttgtacccttcctgacaggcttaagggatgtaataagccttggttgttcattact 237

                                                                       
Query: 521 aagcacaccgatttcagatgaccaagtgtctccattgcagcagcaataatggccaataat 580
           ||||||||||||||||||||||||||| |||||||||||||| || || |||||||| ||
Sbjct: 236 aagcacaccgatttcagatgaccaagtatctccattgcagcaacagtagtggccaatgat 177

                                                                       
Query: 581 agcacctattataccagttataacctttgaaccatttgagtccaagcattgatcttgacc 640
           | ||||||| || |||||||||| |||||||||||||||||||| ||| |||||||| ||
Sbjct: 176 accacctatgatgccagttataagctttgaaccatttgagtccatgcactgatcttgccc 117

                      
Query: 641 cccagtcatta 651
            ||||||||||
Sbjct: 116 tccagtcatta 106

---

>ref|NM_193723.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score =  394 bits (199), Expect = e-106
 Identities = 387/450 (86%)
 Strand = Plus / Minus

                                                                       
Query: 234 acctttttcctaacactgcagtatccgctgaactgaagtgtggcacccagaaatgaatca 293
           ||||| |||| ||||||||||||||| |||||||| |||||||||||||  | |||||||
Sbjct: 746 accttcttccgaacactgcagtatccactgaactggagtgtggcacccaacactgaatca 687

                                                                       
Query: 294 attagactcccaagcaaaccagcagcagcagagataggtattactaggagctgttgaagc 353
           || ||||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||| 
Sbjct: 686 atcagactgccaagcaaaccagcagtagcagagatgggtattactagaagctgtcgaaga 627

                                                                       
Query: 354 gacatatcaaaagaacaatcagctgtcatcagtccaacagcaacaaaagtcagaccaatg 413
           | ||  ||||| || || ||  | |||| ||||||||||  ||||||||||||||| |||
Sbjct: 626 gccacgtcaaatgagcactccacagtcaacagtccaacaaaaacaaaagtcagacctatg 567

                                                                       
Query: 414 gttagaccacctgctgtggcagcaagaagtccttgtaaggtcactccaccatttgtacct 473
            |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 566 attaggccacctgctgtggcagcaagaaggccttgtaaggtcactccaccgtttgtacct 507

                                                                       
Query: 474 ttcctgacaggcttnagggtagtgacaagccgtggttgttcatcactaagcacaccgatt 533
           |||||||||||||| || ||||| | ||| ||||| |||||||||||||||||||| | |
Sbjct: 506 ttcctgacaggcttcagagtagtaataagacgtggctgttcatcactaagcacaccaagt 447

                                                                       
Query: 534 tcagatgaccaagtgtctccattgcagcagcaataatggccaataatagcacctattata 593
           || ||||||||||| |||||||||||||||||||| || ||||| ||  |||| || |||
Sbjct: 446 tcggatgaccaagtatctccattgcagcagcaatagtgaccaatgatgccaccaataata 387

                                                                       
Query: 594 ccagttataacctttgaaccatttgagtccaagcattgatcttgacccccagtcattatc 653
           |||||||||||||||||  |||  ||||||| |||||||||||| || || |||||| | 
Sbjct: 386 ccagttataacctttgactcatgggagtccaggcattgatcttgtcctccggtcattgtt 327

                                         
Query: 654 gccaatacaataaccaatacagttgctatt 683
           |||||||  || ||||||| ||| ||||||
Sbjct: 326 gccaatatgatgaccaatatagtagctatt 297

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  258 bits (130), Expect = 2e-65
 Identities = 223/254 (87%)
 Strand = Plus / Minus

                                                                            
Query: 234      acctttttcctaacactgcagtatccgctgaactgaagtgtggcacccagaaatgaatca 293
                ||||| |||| ||||||||||||||| |||||||| |||||||||||||  | |||||||
Sbjct: 17695670 accttcttccgaacactgcagtatccactgaactggagtgtggcacccaacactgaatca 17695611

                                                                            
Query: 294      attagactcccaagcaaaccagcagcagcagagataggtattactaggagctgttgaagc 353
                || ||||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||| 
Sbjct: 17695610 atcagactgccaagcaaaccagcagtagcagagatgggtattactagaagctgtcgaaga 17695551

                                                                            
Query: 354      gacatatcaaaagaacaatcagctgtcatcagtccaacagcaacaaaagtcagaccaatg 413
                | ||  ||||| || || ||  | |||| ||||||||||  ||||||||||||||| |||
Sbjct: 17695550 gccacgtcaaatgagcactccacagtcaacagtccaacaaaaacaaaagtcagacctatg 17695491

                                                                            
Query: 414      gttagaccacctgctgtggcagcaagaagtccttgtaaggtcactccaccatttgtacct 473
                 |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 17695490 attaggccacctgctgtggcagcaagaaggccttgtaaggtcactccaccgtttgtacct 17695431

                              
Query: 474      ttcctgacaggctt 487
                ||||||||||||||
Sbjct: 17695430 ttcctgacaggctt 17695417



 Score =  163 bits (82), Expect = 1e-36
 Identities = 112/122 (91%)
 Strand = Plus / Minus

                                                                            
Query: 116      aatgcacgcataagctgtaatcacagatgttagcagcacagacactgcattaacagcatc 175
                |||||||||||||||||||| | ||| |||||| |||||||| || |||||||| |||||
Sbjct: 17701990 aatgcacgcataagctgtaaccgcagttgttagtagcacagatacagcattaaccgcatc 17701931

                                                                            
Query: 176      attatcaaggatagtcattccagaaatcttggtgacggtaggtccccgtttactgaccac 235
                |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 17701930 attatccaggatagtcattccagaaatcttggtgactgtagggccccgtttactgaccac 17701871

                  
Query: 236      ct 237
                ||
Sbjct: 17701870 ct 17701869



 Score =  143 bits (72), Expect = 9e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                            
Query: 504      cgtggttgttcatcactaagcacaccgatttcagatgaccaagtgtctccattgcagcag 563
                ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||
Sbjct: 17694501 cgtggctgttcatcactaagcacaccaagttcggatgaccaagtatctccattgcagcag 17694442

                                                                            
Query: 564      caataatggccaataatagcacctattataccagttataacctttgaaccatttgagtcc 623
                ||||| || ||||| ||  |||| || ||||||||||||||||||||  |||  ||||||
Sbjct: 17694441 caatagtgaccaatgatgccaccaataataccagttataacctttgactcatgggagtcc 17694382

                                                                            
Query: 624      aagcattgatcttgacccccagtcattatcgccaatacaataaccaatacagttgctatt 683
                | |||||||||||| || || |||||| | |||||||  || ||||||| ||| ||||||
Sbjct: 17694381 aggcattgatcttgtcctccggtcattgttgccaatatgatgaccaatatagtagctatt 17694322

---

>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0094H06
          Length = 147245

 Score =  258 bits (130), Expect = 2e-65
 Identities = 223/254 (87%)
 Strand = Plus / Minus

                                                                         
Query: 234   acctttttcctaacactgcagtatccgctgaactgaagtgtggcacccagaaatgaatca 293
             ||||| |||| ||||||||||||||| |||||||| |||||||||||||  | |||||||
Sbjct: 77205 accttcttccgaacactgcagtatccactgaactggagtgtggcacccaacactgaatca 77146

                                                                         
Query: 294   attagactcccaagcaaaccagcagcagcagagataggtattactaggagctgttgaagc 353
             || ||||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||| 
Sbjct: 77145 atcagactgccaagcaaaccagcagtagcagagatgggtattactagaagctgtcgaaga 77086

                                                                         
Query: 354   gacatatcaaaagaacaatcagctgtcatcagtccaacagcaacaaaagtcagaccaatg 413
             | ||  ||||| || || ||  | |||| ||||||||||  ||||||||||||||| |||
Sbjct: 77085 gccacgtcaaatgagcactccacagtcaacagtccaacaaaaacaaaagtcagacctatg 77026

                                                                         
Query: 414   gttagaccacctgctgtggcagcaagaagtccttgtaaggtcactccaccatttgtacct 473
              |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 77025 attaggccacctgctgtggcagcaagaaggccttgtaaggtcactccaccgtttgtacct 76966

                           
Query: 474   ttcctgacaggctt 487
             ||||||||||||||
Sbjct: 76965 ttcctgacaggctt 76952



 Score =  163 bits (82), Expect = 1e-36
 Identities = 112/122 (91%)
 Strand = Plus / Minus

                                                                         
Query: 116   aatgcacgcataagctgtaatcacagatgttagcagcacagacactgcattaacagcatc 175
             |||||||||||||||||||| | ||| |||||| |||||||| || |||||||| |||||
Sbjct: 83525 aatgcacgcataagctgtaaccgcagttgttagtagcacagatacagcattaaccgcatc 83466

                                                                         
Query: 176   attatcaaggatagtcattccagaaatcttggtgacggtaggtccccgtttactgaccac 235
             |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 83465 attatccaggatagtcattccagaaatcttggtgactgtagggccccgtttactgaccac 83406

               
Query: 236   ct 237
             ||
Sbjct: 83405 ct 83404



 Score =  143 bits (72), Expect = 9e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                         
Query: 504   cgtggttgttcatcactaagcacaccgatttcagatgaccaagtgtctccattgcagcag 563
             ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||
Sbjct: 76036 cgtggctgttcatcactaagcacaccaagttcggatgaccaagtatctccattgcagcag 75977

                                                                         
Query: 564   caataatggccaataatagcacctattataccagttataacctttgaaccatttgagtcc 623
             ||||| || ||||| ||  |||| || ||||||||||||||||||||  |||  ||||||
Sbjct: 75976 caatagtgaccaatgatgccaccaataataccagttataacctttgactcatgggagtcc 75917

                                                                         
Query: 624   aagcattgatcttgacccccagtcattatcgccaatacaataaccaatacagttgctatt 683
             | |||||||||||| || || |||||| | |||||||  || ||||||| ||| ||||||
Sbjct: 75916 aggcattgatcttgtcctccggtcattgttgccaatatgatgaccaatatagtagctatt 75857

---

>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
              complete sequence
          Length = 168402

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 363    aaagaacaatcagctgtcatcagtcca 389
              |||||||||| ||||||||||||||||
Sbjct: 155435 aaagaacaattagctgtcatcagtcca 155409

---

>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 363    aaagaacaatcagctgtcatcagtcca 389
              |||||||||| ||||||||||||||||
Sbjct: 134790 aaagaacaattagctgtcatcagtcca 134764

---

>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete
              sequence
          Length = 160615

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 215    aggtccccgtttactgaccacct 237
              |||||||||||||||||||||||
Sbjct: 109063 aggtccccgtttactgaccacct 109085

---

>gb|AF138523.1|AF138523 HIV-1 p8c095-07 from USA envelope glycoprotein (env) gene, partial
           cds
          Length = 606

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 282 agaaatgaatcaattagactcccaagcaaa 311
           ||||||||| |||||||||||||| |||||
Sbjct: 421 agaaatgaaacaattagactcccatgcaaa 450

---

>gb|U87293.1|U87293 Bulinus senegalensis clone SEN239M species-specific RAPD marker
          Length = 519

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 599 tataacctttgaaccatttgag 620
           ||||||||||||||||||||||
Sbjct: 445 tataacctttgaaccatttgag 466

---

>emb|BX004972.12| Zebrafish DNA sequence from clone CH211-166A6 in linkage group 8,
            complete sequence
          Length = 151374

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 260  gctgaactgaagtgtggcacc 280
            |||||||||||||||||||||
Sbjct: 4594 gctgaactgaagtgtggcacc 4574

---

>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13,
             complete sequence
          Length = 157140

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   agtccaacagcaacaaaagtc 404
             |||||||||||||||||||||
Sbjct: 43962 agtccaacagcaacaaaagtc 43982

---

>emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on chromosome 13 Contains the
              gene for a novel protein similar to myosin, light
              polypeptide kinase 2 Mylk2, a novel gene, the Wrnip gene
              for Werner syndrome homolog (human) interacting protein,
              the Serpinb1a gene for serine (or cysteine) proteinase
              inhibitor clade B (ovalbumin) member 1a, a Serpinb1
              pseudogene and a CpG island, complete sequence
          Length = 190673

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 545    agtgtctccattgcagcagca 565
              |||||||||||||||||||||
Sbjct: 128498 agtgtctccattgcagcagca 128518

---

>emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in linkage group 13,
            complete sequence
          Length = 193213

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 384  agtccaacagcaacaaaagtc 404
            |||||||||||||||||||||
Sbjct: 7593 agtccaacagcaacaaaagtc 7573

---

>gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, complete sequence
          Length = 191468

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      tcttgcttgaagtaaacatca 27
              |||||||||||||||||||||
Sbjct: 101905 tcttgcttgaagtaaacatca 101925

---

>gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, complete sequence
          Length = 270154

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     tgcttctaaaagaagaaaatg 119
              |||||||||||||||||||||
Sbjct: 102802 tgcttctaaaagaagaaaatg 102822

---

>ref|XM_687332.1| PREDICTED: Danio rerio similar to Putative eukaryotic translation
           initiation factor 3 subunit (eIF-3) (LOC563969), mRNA
          Length = 1997

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 260 gctgaactgaagtgtggcacc 280
           |||||||||||||||||||||
Sbjct: 305 gctgaactgaagtgtggcacc 285

---

>gb|L22945.1|HIV1SE365A Human immunodeficiency virus type 1 (SE365) proviral DNA encoding
            env, tat, vpu, rev, and nef genes
          Length = 3315

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 578  aatagcacctattataccagttata 602
            ||||||||| |||||||||||||||
Sbjct: 1037 aatagcaccaattataccagttata 1061

---

>ref|NM_122000.2| Arabidopsis thaliana unknown protein AT5G19930 mRNA, complete cds
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 540 gaccaagtgtctccattgcagcag 563
           ||||||||||||||||| ||||||
Sbjct: 496 gaccaagtgtctccattacagcag 473

---

>gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, complete sequence
          Length = 190235

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   tccacattaacatgattgag 66
            ||||||||||||||||||||
Sbjct: 1303 tccacattaacatgattgag 1284

---

>ref|XM_638972.1| Dictyostelium discoideum hypothetical protein (DDB0203238), partial
            mRNA
          Length = 3015

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 655  ccaatacaataaccaataca 674
            ||||||||||||||||||||
Sbjct: 1811 ccaatacaataaccaataca 1830

---

>gb|BT014374.1| Lycopersicon esculentum clone 133662F, mRNA sequence
          Length = 1140

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 gtcactccaccatttgtacc 472
           ||||||||||||||||||||
Sbjct: 598 gtcactccaccatttgtacc 579



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 540 gaccaagtgtctccattgcagcagcaataatggccaataatagcacctatta 591
           ||||| ||||| |||||||||||||| || || ||||| ||| |||| ||||
Sbjct: 511 gaccatgtgtccccattgcagcagcagtactgaccaatgataccaccaatta 460

---

>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence
          Length = 200605

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    aagcaaaccagcagcagcag 324
              ||||||||||||||||||||
Sbjct: 114767 aagcaaaccagcagcagcag 114748

---

>emb|CR339051.6| Zebrafish DNA sequence from clone DKEY-223N8 in linkage group 7, complete
              sequence
          Length = 176851

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 646    tcattatcgccaatacaata 665
              ||||||||||||||||||||
Sbjct: 138223 tcattatcgccaatacaata 138204

---

>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 226532

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    caacagcaacaaaagtcaga 407
              ||||||||||||||||||||
Sbjct: 202038 caacagcaacaaaagtcaga 202019

---

>emb|AJ302074.2|SPN302074 Streptococcus pneumoniae bacteriophage MM1 complete genome
          Length = 40248

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   aaaatgcacgcataagctgtaatc 137
             ||||||||||||| ||||||||||
Sbjct: 14087 aaaatgcacgcatgagctgtaatc 14064

---

>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 179776

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  cattaacagcatcattatca 182
            ||||||||||||||||||||
Sbjct: 2246 cattaacagcatcattatca 2265

---

>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 164597

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   cattaacagcatcattatca 182
             ||||||||||||||||||||
Sbjct: 74838 cattaacagcatcattatca 74819

---

>gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, complete sequence
          Length = 184868

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   atcacagatgttagcagcac 154
             ||||||||||||||||||||
Sbjct: 51259 atcacagatgttagcagcac 51278

---

>gb|AC121493.1| Homo sapiens chromosome 3 clone RP11-88H12, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    atcacagatgttagcagcac 154
              ||||||||||||||||||||
Sbjct: 177764 atcacagatgttagcagcac 177783

---

>gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complete sequence
          Length = 155217

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    aaacatcagtcttccgcccttgga 43
             |||||||||||||| |||||||||
Sbjct: 16352 aaacatcagtcttctgcccttgga 16375

---

>gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, complete sequence
          Length = 152010

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 390    acagcaacaaaagtcagaccaatg 413
              |||||||||||| |||||||||||
Sbjct: 108988 acagcaacaaaattcagaccaatg 109011

---

>emb|BX833886.1|CNS0A1RS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL82ZA03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1051

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 540 gaccaagtgtctccattgcagcag 563
           ||||||||||||||||| ||||||
Sbjct: 485 gaccaagtgtctccattacagcag 462

---

>emb|BX830437.1|CNS0A18F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB80ZG09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1017

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 540 gaccaagtgtctccattgcagcag 563
           ||||||||||||||||| ||||||
Sbjct: 470 gaccaagtgtctccattacagcag 447

---

>gb|AC105422.3| Homo sapiens BAC clone RP11-707O8 from 2, complete sequence
          Length = 41655

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    atgattgagtattaggaaca 77
             ||||||||||||||||||||
Sbjct: 15180 atgattgagtattaggaaca 15199

---

>gb|AC130823.4| Mus musculus BAC clone RP23-320F5 from chromosome 15, complete sequence
          Length = 193211

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     tccacattaacatgattgag 66
              ||||||||||||||||||||
Sbjct: 172817 tccacattaacatgattgag 172798

---

>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  atcagctgtcatcagtccaa 390
            ||||||||||||||||||||
Sbjct: 8510 atcagctgtcatcagtccaa 8491

---

>gb|AY085046.1| Arabidopsis thaliana clone 12566 mRNA, complete sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 540 gaccaagtgtctccattgcagcag 563
           ||||||||||||||||| ||||||
Sbjct: 475 gaccaagtgtctccattacagcag 452

---

>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    ttctaaaagaagaaaatgca 121
              ||||||||||||||||||||
Sbjct: 389184 ttctaaaagaagaaaatgca 389203

---

>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16
          Length = 84334

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 540   gaccaagtgtctccattgcagcag 563
             ||||||||||||||||| ||||||
Sbjct: 27197 gaccaagtgtctccattacagcag 27220

---

>dbj|AP002462.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:T8N9
          Length = 36329

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    ggaaaacccaaccaaaccct 98
             ||||||||||||||||||||
Sbjct: 25854 ggaaaacccaaccaaaccct 25873

---

>emb|AL359680.4|CNS05TEY Human chromosome 14 DNA sequence BAC R-716B8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175009

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   aatcaattagactcccaagc 308
             ||||||||||||||||||||
Sbjct: 36604 aatcaattagactcccaagc 36585

---

>emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in linkage group 20,
             complete sequence
          Length = 80017

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   acactgcattaacagcatca 176
             ||||||||||||||||||||
Sbjct: 65252 acactgcattaacagcatca 65271

---

>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete
              sequence
          Length = 307657

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cattaacagcatcattatca 182
              ||||||||||||||||||||
Sbjct: 240077 cattaacagcatcattatca 240058

---

>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   aagcaaaccagcagcagcag 324
             ||||||||||||||||||||
Sbjct: 15048 aagcaaaccagcagcagcag 15067

---

>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete
             sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   aacactgcagtatccgctga 264
             ||||||||||||||||||||
Sbjct: 39953 aacactgcagtatccgctga 39972

---

>emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-96H16 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 156292

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  aatcaattagactcccaagc 308
            ||||||||||||||||||||
Sbjct: 2162 aatcaattagactcccaagc 2181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,880,965
Number of Sequences: 3902068
Number of extensions: 6880965
Number of successful extensions: 150965
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150810
Number of HSP's gapped (non-prelim): 151
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---