| Clone Name | rbags28k19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Plus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 21037692 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 21037751 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 21037752 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 21037811 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 21037812 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 21037871 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 21037872 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 21037931 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 21037932 attggcatgatcaatggtggcatcaattgccccatc 21037967
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Plus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 129781 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 129840 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 129841 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 129900 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 129901 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 129960 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 129961 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 130020 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 130021 attggcatgatcaatggtggcatcaattgccccatc 130056
>dbj|AK101536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E17, full insert sequence Length = 1827 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Minus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 1583 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 1524 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1523 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 1464 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 1463 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 1404 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 1403 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 1344 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 1343 attggcatgatcaatggtggcatcaattgccccatc 1308
>dbj|AK100985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D07, full insert sequence Length = 1824 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Minus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 1545 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 1486 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1485 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 1426 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 1425 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 1366 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 1365 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 1306 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 1305 attggcatgatcaatggtggcatcaattgccccatc 1270
>dbj|AK059017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A11, full insert sequence Length = 1019 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Minus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 877 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 818 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 817 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 758 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 757 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 698 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 697 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 638 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 637 attggcatgatcaatggtggcatcaattgccccatc 602
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Plus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 58992 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 59051 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 59052 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 59111 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 59112 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 59171 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 59172 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 59231 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 59232 attggcatgatcaatggtggcatcaattgccccatc 59267
>dbj|AB031299.1| Oryza sativa (japonica cultivar-group) Os21D7 mRNA, complete cds Length = 1776 Score = 285 bits (144), Expect = 7e-74 Identities = 243/276 (88%) Strand = Plus / Minus Query: 270 accaacctagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctg 329 ||||| ||| ||||| || || |||||||| |||||||| || || |||||||||||||| Sbjct: 1518 accaatctaaaagtcgtcatcgtcctcctcagccatgtgttttgctagttcttcctcctg 1459 Query: 330 ctggagcctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaa 389 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1458 ttggagcctctcgcgcctcttctcagcactctccttttccttgtgagaattcggagggaa 1399 Query: 390 cctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaa 449 |||||| || ||||| || || ||||||||||||| ||| ||||||||||| || ||||| Sbjct: 1398 cctcagtgctttgaccgcttcgttgtgcatgttcaagcaaaatgcaatccttgaattgaa 1339 Query: 450 agcagcctgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaacc 509 |||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||| Sbjct: 1338 agcaatctgtggctcattcgttgagtagacatcaccagtctcttttgacaccatccaacc 1279 Query: 510 attggcatgatcgatggtggcatcaactgccccatc 545 |||||||||||| ||||||||||||| ||||||||| Sbjct: 1278 attggcatgatcaatggtggcatcaattgccccatc 1243
>gb|AY103743.1| Zea mays PCO080586 mRNA sequence Length = 1852 Score = 250 bits (126), Expect = 4e-63 Identities = 234/270 (86%) Strand = Plus / Minus Query: 277 tagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagc 336 |||||||| |||||||| ||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 1602 tagaagtcgtcgtcatcatcctcagccatgtgcttagccagttcttcctcctgctgaagc 1543 Query: 337 ctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcaga 396 |||||||| | |||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 1542 ctctctcggcgcttctcagcactctccttttccttgtgagaattaggggggaatctcatc 1483 Query: 397 gccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcc 456 |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 1482 gccttgaccgcctcattgtgcatgttgaggcagaacgcaatcctggagttgaatgcaatt 1423 Query: 457 tgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggca 516 |||||||| ||||| ||||| || || || || || ||||| |||| ||| ||||| ||| Sbjct: 1422 tgtggctcatttgtagagtagacatcaccggtttccttcgataccatccagccatttgca 1363 Query: 517 tgatcgatggtggcatcaactgccccatct 546 ||||| |||||||| |||| ||| |||||| Sbjct: 1362 tgatctatggtggcgtcaattgcgccatct 1333
>gb|AF479041.1| Triticum aestivum regulatory particle mon-ATPase subunit 3 mRNA, partial cds Length = 480 Score = 246 bits (124), Expect = 6e-62 Identities = 229/264 (86%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||| ||||||||||||||||||||||| || || |||||||||||||||||||| ||| Sbjct: 473 tcatcatcatcctcctcggccatgtgctttgccagctcttcctcctgctggagcctttct 414 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| || |||||||| |||||||| ||||||||||||||||||| |||||| Sbjct: 413 cggcgcttctcagcgctctccttctccttgtgcgaattcggggggaacctcatggccttg 354 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || ||||| |||||||| |||||||| ||||| ||||||||||| |||||||| || Sbjct: 353 accgcttcattatgcatgttgaggcagaaagcaattctggagttgaatgcagcctggggt 294 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || || ||||| ||||||||||||| ||| ||||| ||||| || Sbjct: 293 tcatttgtcgagtagacatcaccagtttctttcgacaccatccagccatttgcatggtct 234 Query: 523 atggtggcatcaactgccccatct 546 ||||||||||||| ||| |||||| Sbjct: 233 atggtggcatcaattgcaccatct 210
>gb|BT016664.1| Zea mays clone Contig497 mRNA sequence Length = 1385 Score = 218 bits (110), Expect = 1e-53 Identities = 230/270 (85%) Strand = Plus / Minus Query: 277 tagaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagc 336 |||||||| || || |||||||| ||||||||||| || |||||||||||||| || ||| Sbjct: 1216 tagaagtcgtcatcctcctcctcagccatgtgcttagccagttcttcctcctgttgaagc 1157 Query: 337 ctctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcaga 396 |||||||| | ||||||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 1156 ctctctcggcgcttctcggcgctctccttttccttatgagaattaggggggaatctcatc 1097 Query: 397 gccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcc 456 |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 1096 gccttgaccgcctcattgtgcatgttgaggcagaacgcaatcctggagttgaatgcaatt 1037 Query: 457 tgtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggca 516 |||||||| ||||| ||||| || || || || | ||||| |||| ||| ||||| ||| Sbjct: 1036 tgtggctcatttgtagagtagacatcaccggttttcttcgataccatccagccatttgca 977 Query: 517 tgatcgatggtggcatcaactgccccatct 546 ||||| |||||||| |||| ||| |||||| Sbjct: 976 tgatctatggtggcgtcaattgcgccatct 947
>ref|XM_483674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 1515 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctca 1456 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| ||||| ||||||||||||||||| ||||||||||||| || || || Sbjct: 1455 cggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcattgctttc 1396 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || |||||||||||||| ||||| |||||||||| |||||||| ||| |||||| Sbjct: 1395 acagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatctgtggt 1336 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || |||||||| ||||||||||||| ||| || ||||||||||| Sbjct: 1335 tcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggcatgatct 1276 Query: 523 atggtggcatcaactgccccatc 545 ||||||||||||| ||| ||||| Sbjct: 1275 atggtggcatcaattgcgccatc 1253
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Plus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 27581473 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctca 27581532 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| ||||| ||||||||||||||||| ||||||||||||| || || || Sbjct: 27581533 cggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcattgctttc 27581592 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || |||||||||||||| ||||| |||||||||| |||||||| ||| |||||| Sbjct: 27581593 acagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatctgtggt 27581652 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || |||||||| ||||||||||||| ||| || ||||||||||| Sbjct: 27581653 tcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggcatgatct 27581712 Query: 523 atggtggcatcaactgccccatc 545 ||||||||||||| ||| ||||| Sbjct: 27581713 atggtggcatcaattgcgccatc 27581735
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Plus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 63763 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctca 63822 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| ||||| ||||||||||||||||| ||||||||||||| || || || Sbjct: 63823 cggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcattgctttc 63882 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || |||||||||||||| ||||| |||||||||| |||||||| ||| |||||| Sbjct: 63883 acagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatctgtggt 63942 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || |||||||| ||||||||||||| ||| || ||||||||||| Sbjct: 63943 tcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggcatgatct 64002 Query: 523 atggtggcatcaactgccccatc 545 ||||||||||||| ||| ||||| Sbjct: 64003 atggtggcatcaattgcgccatc 64025
>dbj|AK061287.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H08, full insert sequence Length = 1694 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 1515 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctca 1456 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| ||||| ||||||||||||||||| ||||||||||||| || || || Sbjct: 1455 cggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcattgctttc 1396 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || |||||||||||||| ||||| |||||||||| |||||||| ||| |||||| Sbjct: 1395 acagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatctgtggt 1336 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || |||||||| ||||||||||||| ||| || ||||||||||| Sbjct: 1335 tcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggcatgatct 1276 Query: 523 atggtggcatcaactgccccatc 545 ||||||||||||| ||| ||||| Sbjct: 1275 atggtggcatcaattgcgccatc 1253
>dbj|AB070258.1| Oryza sativa (japonica cultivar-group) OsRPN3 mRNA for 26S proteasome regulatory particle non-ATPase subunit3, partial cds Length = 1458 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 1253 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctca 1194 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 || | |||||| ||||| ||||||||||||||||| ||||||||||||| || || || Sbjct: 1193 cggcgcttctccgcactttccttttccttgtgagagttcggggggaaccgcattgctttc 1134 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || |||||||||||||| ||||| |||||||||| |||||||| ||| |||||| Sbjct: 1133 acagcttcattgtgcatgttgaggcaaaatgcaatccgagagttgaatgcaatctgtggt 1074 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| || |||||||| ||||||||||||| ||| || ||||||||||| Sbjct: 1073 tcatttgtcgagtagacatcgccagtttctttcgacaccatccagccgttggcatgatct 1014 Query: 523 atggtggcatcaactgccccatc 545 ||||||||||||| ||| ||||| Sbjct: 1013 atggtggcatcaattgcgccatc 991
>dbj|D13434.1|DAR21D7A Daucus carota mRNA for 21D7 antigen, complete cds Length = 1816 Score = 113 bits (57), Expect = 6e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||| ||||| |||||||| || ||||| || || |||| ||||||||| | |||||| Sbjct: 1489 tcatcatcatcttcctcggctatatgctttgcaagctcttgctcctgctgttgtctctct 1430 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 | ||||||||| ||||| ||||| |||||||||||||| | ||| || | || || Sbjct: 1429 ctcctcttctcagcactttccttgtccttgtgagaatttgcgggaaatcgaagtgcacga 1370 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || ||||| |||||||| ||||| || || |||||||| || ||||| || |||||| Sbjct: 1369 acagcttcattatgcatgttaaggcaaaacgctatcctggaattaaaagctgcttgtggc 1310 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||||||||| | ||| || || || || ||||||| ||| ||||| ||||||||| Sbjct: 1309 tcatttgttgagtaaatgtctccggtttcctttgacaccatccacccatttgcatgatcg 1250 Query: 523 atggtggcatcaa 535 |||||||| |||| Sbjct: 1249 atggtggcgtcaa 1237
>gb|AF100332.1|AF100332 Dendrobium grex Madame Thong-IN putative 21D7 protein (ovg29) mRNA, partial cds Length = 765 Score = 105 bits (53), Expect = 2e-19 Identities = 203/253 (80%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctct 342 ||||| || |||||||| || ||||||||||| || || | |||||| || |||| || Sbjct: 558 tcatcatcctcctcctcagcaatgtgcttcgcaagctcctgctcctggtgttgcctttcc 499 Query: 343 cgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagagccttg 402 | ||||||||| || || || || || || || ||||| || || |||||||| |||||| Sbjct: 498 ctcctcttctctgcgctttctttctctttatgggaattgggtggaaacctcagcgccttg 439 Query: 403 acggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtggc 462 || || ||||| |||||||| |||||||||||||| ||||| | ||||||| ||| ||| Sbjct: 438 actgcttcattatgcatgtttaggcagaatgcaattctggaatggaaagcaagctgaggc 379 Query: 463 tcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcatgatcg 522 || ||||| ||||| | ||| || || |||||||| | || ||| |||||||||||||| Sbjct: 378 tcatttgtggagtagatgtcaccggtttctttcgatatcatccatccattggcatgatca 319 Query: 523 atggtggcatcaa 535 || || ||||||| Sbjct: 318 atcgttgcatcaa 306
>dbj|AB001422.1| Nicotiana tabacum mRNA for 21D7, complete cds Length = 1718 Score = 73.8 bits (37), Expect = 5e-10 Identities = 211/269 (78%) Strand = Plus / Minus Query: 278 agaagtcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcc 337 |||| ||||| |||||||| || || |||||||| || || |||| || ||||| | | Sbjct: 1512 agaaatcatcatcatcctcttcagctatgtgcttagcaagctcttgttcttgctgttgtc 1453 Query: 338 tctctcgcctcttctcggcactctccttttccttgtgagaattcggggggaacctcagag 397 |||||| ||||||||||||||| || || |||||||| ||||| || || || | |||| Sbjct: 1452 tctctctcctcttctcggcactttctttctccttgtgggaatttggaggaaatcgaagag 1393 Query: 398 ccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcct 457 | || |||||||| ||||| ||||| ||||| ||||| || ||||| |||||| | Sbjct: 1392 cgcgcacagcctcattatgcatattcagacagaaggcaattctcgagttaaaagcaattt 1333 Query: 458 gtggctcgtttgttgagtacacgtcgccagtctctttcgacaccacccaaccattggcat 517 | ||||| ||||| ||||| | ||| |||||||| || || |||| ||| ||||| |||| Sbjct: 1332 gaggctcatttgtagagtagatgtcaccagtctcctttgataccatccatccattcgcat 1273 Query: 518 gatcgatggtggcatcaactgccccatct 546 |||| | || ||||||| ||| |||||| Sbjct: 1272 gatccaacgtcgcatcaattgcaccatct 1244
>dbj|AK058374.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G09, full insert sequence Length = 359 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 283 tcatcgtcatcctcctcggccatgtgcttcgcgagttcttcctcctgctggagcctctc 341 ||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| Sbjct: 71 tcatcgtcatcttcctcagccatgtgttttgccagctcctcctcctgttggagcctctc 13
>gb|AC102273.9| Mus musculus chromosome 3, clone RP24-285I22, complete sequence Length = 162779 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 406 gcctcattgtgcatgttcaggca 428 ||||||||||||||||||||||| Sbjct: 817 gcctcattgtgcatgttcaggca 795
>gb|AC158386.4| Mus musculus chromosome 3, clone RP24-281K23, complete sequence Length = 177594 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 406 gcctcattgtgcatgttcaggca 428 ||||||||||||||||||||||| Sbjct: 56389 gcctcattgtgcatgttcaggca 56411
>emb|BX020452.1|CNS08NY0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30AE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 284 catcgtcatcctcctcggccatgtgcttcgc 314 |||||||||||||||||||||| | |||||| Sbjct: 190 catcgtcatcctcctcggccatctccttcgc 220
>emb|BX010298.1|CNS08G3Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 818 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 284 catcgtcatcctcctcggccatgtgcttcgc 314 |||||||||||||||||||||| | |||||| Sbjct: 209 catcgtcatcctcctcggccatctccttcgc 239
>ref|XM_319831.2| Anopheles gambiae str. PEST ENSANGP00000016528 (ENSANGG00000014039), partial mRNA Length = 1491 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 284 catcgtcatcctcctcggccatgtgcttcgc 314 |||||||||||||||||||||| | |||||| Sbjct: 1483 catcgtcatcctcctcggccatctccttcgc 1453
>gb|AF042732.1|AF042732 Anopheles gambiae (Bb) gene, partial cds; and TU37B2 (TU37B2) and diphenol oxidase-A2 (Dox-A2) genes, complete cds Length = 4206 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 284 catcgtcatcctcctcggccatgtgcttcgc 314 |||||||||||||||||||||| | |||||| Sbjct: 3582 catcgtcatcctcctcggccatctccttcgc 3552
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Minus Query: 406 gcctcattgtgcatgttcaggcagaatgcaatcc 439 ||||||||||||||||| || ||||| ||||||| Sbjct: 2979 gcctcattgtgcatgttaagacagaaggcaatcc 2946
>gb|AY119577.1| Drosophila melanogaster LD05592 full insert cDNA Length = 1700 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 gaagtcatcgtcatcctcctcg 300 |||||||||||||||||||||| Sbjct: 1056 gaagtcatcgtcatcctcctcg 1035
>ref|NM_136442.3| Drosophila melanogaster CG1621-RA (CG1621), mRNA Length = 1687 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 gaagtcatcgtcatcctcctcg 300 |||||||||||||||||||||| Sbjct: 1056 gaagtcatcgtcatcctcctcg 1035
>gb|AC163708.3| Gallus gallus BAC clone CH261-58P10 from chromosome ul, complete sequence Length = 226873 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 gcagaatgcaatcctggagttg 447 |||||||||||||||||||||| Sbjct: 103063 gcagaatgcaatcctggagttg 103084
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 gaagtcatcgtcatcctcctcg 300 |||||||||||||||||||||| Sbjct: 85154 gaagtcatcgtcatcctcctcg 85175
>gb|AE003841.5| Drosophila melanogaster chromosome 2R, section 9 of 73 of the complete sequence Length = 266427 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 gaagtcatcgtcatcctcctcg 300 |||||||||||||||||||||| Sbjct: 241418 gaagtcatcgtcatcctcctcg 241439
>gb|AC171008.2| Gallus gallus BAC clone CH261-169D8 from chromosome ul, complete sequence Length = 170270 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 426 gcagaatgcaatcctggagttg 447 |||||||||||||||||||||| Sbjct: 46393 gcagaatgcaatcctggagttg 46372
>gb|AC004280.1|AC004280 Drosophila melanogaster DNA sequence (P1 DS01142 (D148)), complete sequence Length = 78174 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 gaagtcatcgtcatcctcctcg 300 |||||||||||||||||||||| Sbjct: 49484 gaagtcatcgtcatcctcctcg 49505
>ref|NM_106248.2| Arabidopsis thaliana unknown protein AT1G75990 mRNA, complete cds Length = 1646 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtgg 461 ||||||||||| |||| ||||| |||||||| ||||| || |||| |||||| Sbjct: 1389 tcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtgg 1337
>ref|XM_550136.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcagcagctgaaagcaccaa 260 ||||||||||||||||||||| Sbjct: 1614 tgcagcagctgaaagcaccaa 1634
>gb|BT015771.1| Arabidopsis thaliana At1g75990 mRNA, complete cds Length = 1464 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtgg 461 ||||||||||| |||| ||||| |||||||| ||||| || |||| |||||| Sbjct: 1331 tcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtgg 1279
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cagctgaaagcaccaagagag 265 ||||||||||||||||||||| Sbjct: 119942 cagctgaaagcaccaagagag 119962
>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176428 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tccttttccttgtgagaattc 381 ||||||||||||||||||||| Sbjct: 50675 tccttttccttgtgagaattc 50695
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence Length = 183307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 ccttttccttgtgagaattcg 382 ||||||||||||||||||||| Sbjct: 128862 ccttttccttgtgagaattcg 128882
>gb|AY057508.1| Arabidopsis thaliana At1g75990/T4O12_21 mRNA, complete cds Length = 1654 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtgg 461 ||||||||||| |||| ||||| |||||||| ||||| || |||| |||||| Sbjct: 1389 tcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtgg 1337
>gb|AY005799.1| Homo sapiens protein kinase B gamma 1 (AKT3) mRNA, complete cds, alternatively spliced Length = 1695 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ccttttccttgtgagaattcg 382 ||||||||||||||||||||| Sbjct: 1657 ccttttccttgtgagaattcg 1637
>gb|AC079869.22|AC079869 Mus musculus 9 BAC RP23-49M18 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 243675 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 agagtaatagcatcatttaaa 167 ||||||||||||||||||||| Sbjct: 43653 agagtaatagcatcatttaaa 43633
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcagcagctgaaagcaccaa 260 ||||||||||||||||||||| Sbjct: 2563801 tgcagcagctgaaagcaccaa 2563821
>emb|BX817112.1|CNS0AAOL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggcagaatgcaatcctggagttgaaagcagcctgtgg 461 ||||||||||| |||| ||||| |||||||| ||||| || |||| |||||| Sbjct: 1370 tcattgtgcatattcaaacagaaggcaatcctcgagttaaacgcagtctgtgg 1318
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence Length = 175708 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 agagtaatagcatcatttaaa 167 ||||||||||||||||||||| Sbjct: 119763 agagtaatagcatcatttaaa 119743
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcagcagctgaaagcaccaa 260 ||||||||||||||||||||| Sbjct: 118222 tgcagcagctgaaagcaccaa 118242
>ref|NM_181690.1| Homo sapiens v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) (AKT3), transcript variant 2, mRNA Length = 1703 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ccttttccttgtgagaattcg 382 ||||||||||||||||||||| Sbjct: 1665 ccttttccttgtgagaattcg 1645
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 385 gggaacctcagagccttgacggcctcattgtgcatgttcaggcagaatgcaatcctggag 444 ||||||||||| || | || || ||||||||||| |||| ||||| |||||||| ||| Sbjct: 73803 gggaacctcagtgctctaaccgcttcattgtgcatattcaaacagaaggcaatcctcgag 73862 Query: 445 ttgaaagcagcctgtgg 461 || || |||| |||||| Sbjct: 73863 ttaaacgcagtctgtgg 73879
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434B04 Length = 167029 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcagcagctgaaagcaccaa 260 ||||||||||||||||||||| Sbjct: 13576 tgcagcagctgaaagcaccaa 13596
>dbj|AK121921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106E16, full insert sequence Length = 2134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcagcagctgaaagcaccaa 260 ||||||||||||||||||||| Sbjct: 1614 tgcagcagctgaaagcaccaa 1634
>gb|BT021194.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA, complete cds Length = 2626 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctcctgctggagcctctctc 343 ||||||||||||||||||||| Sbjct: 375 cctcctgctggagcctctctc 355
>ref|NM_001038571.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA Length = 2607 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cctcctgctggagcctctctc 343 ||||||||||||||||||||| Sbjct: 375 cctcctgctggagcctctctc 355
>gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217746 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tccttttccttgtgagaattc 381 ||||||||||||||||||||| Sbjct: 82155 tccttttccttgtgagaattc 82135
>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence Length = 157629 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggca 428 |||||||||||||||||||| Sbjct: 72747 tcattgtgcatgttcaggca 72728
>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete sequence Length = 185507 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gtcatcgtcatcctcctcgg 301 |||||||||||||||||||| Sbjct: 177269 gtcatcgtcatcctcctcgg 177250
>gb|AC149264.8| Medicago truncatula clone mth2-78f9, complete sequence Length = 120481 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aatagcatcatttaaattgt 171 |||||||||||||||||||| Sbjct: 111704 aatagcatcatttaaattgt 111723
>gb|AC148609.23| Medicago truncatula clone mth2-58e8, complete sequence Length = 132218 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aatagcatcatttaaattgt 171 |||||||||||||||||||| Sbjct: 40048 aatagcatcatttaaattgt 40067
>emb|AL359647.9| Human DNA sequence from clone RP11-431P10 on chromosome 13 Contains a chaperonin containing TCP1, subunit 5 (epsilon) (KIAA0098) (CCT5) pseudogene, complete sequence Length = 86050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 aagaattgttgggagcatagaaaa 142 ||||||||||||||| |||||||| Sbjct: 30184 aagaattgttgggagtatagaaaa 30161
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a novel gene and the 3' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9), complete sequence Length = 190066 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 cctagaagtcatcgtcatcctcct 298 ||||||| |||||||||||||||| Sbjct: 8047 cctagaactcatcgtcatcctcct 8024
>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 3/8 Length = 347625 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 agtcatcgtcatcctcctcg 300 |||||||||||||||||||| Sbjct: 97964 agtcatcgtcatcctcctcg 97983
>gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, complete sequence Length = 162760 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 atttgtagtgataaaagaat 124 |||||||||||||||||||| Sbjct: 100719 atttgtagtgataaaagaat 100738
>gb|AC027342.5| Homo sapiens chromosome 5 clone CTD-2294O13, complete sequence Length = 112904 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 ggcactctccttttccttgtgaga 377 |||||||||| ||||||||||||| Sbjct: 51623 ggcactctccctttccttgtgaga 51646
>gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169849 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aaaaccacagagtaatagca 158 |||||||||||||||||||| Sbjct: 47876 aaaaccacagagtaatagca 47895
>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I, complete sequence Length = 158096 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctaacatcaactttgtagtc 217 |||||||||||||||||||| Sbjct: 123218 ctaacatcaactttgtagtc 123237
>gb|AC016597.4|AC016597 Homo sapiens chromosome 16 clone CTD-2049O4, complete sequence Length = 129338 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 gtgcatgttcaggcagaatgcaat 437 ||||||||||||||||||| |||| Sbjct: 50503 gtgcatgttcaggcagaattcaat 50480
>emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 agcatcatttaaattgtccctcaa 178 |||||||| ||||||||||||||| Sbjct: 67140 agcatcatataaattgtccctcaa 67163
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence Length = 195874 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcattgtgcatgttcaggca 428 |||||||||||||||||||| Sbjct: 157590 tcattgtgcatgttcaggca 157609
>gb|AC003106.1|AC003106 Homo sapiens Xp22 GS-524I1 (Genome Systems Human BAC library), complete sequence Length = 128888 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aaaaccacagagtaatagca 158 |||||||||||||||||||| Sbjct: 83581 aaaaccacagagtaatagca 83562
>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence Length = 226189 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcattgtgcatgttcaggca 428 |||||||||||||||||||| Sbjct: 128572 tcattgtgcatgttcaggca 128553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,528,853 Number of Sequences: 3902068 Number of extensions: 4528853 Number of successful extensions: 97063 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96884 Number of HSP's gapped (non-prelim): 178 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)