ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28k17 |
|---|---|
| Clone Library Name | barley_pub |
>ACOC_CUCMA (P49608) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) Length = 898 Score = 112 bits (281), Expect = 4e-25 Identities = 50/64 (78%), Positives = 59/64 (92%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT HERYTI+LP D+ +IRPGQDVT+TT+ GKSFTC +RFDTEVELAY+N+GGILPYV Sbjct: 832 LGLTGHERYTIDLPDDISKIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFNNGGILPYV 891 Query: 283 IRNM 272 IRN+ Sbjct: 892 IRNL 895
>ACOC_CUCMC (Q42669) Aconitase (EC 4.2.1.3) (Aconitate hydratase) (Citrate| hydro-lyase) (Fragment) Length = 764 Score = 108 bits (269), Expect = 9e-24 Identities = 48/64 (75%), Positives = 59/64 (92%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT HER+TI+LP++VG+IRPGQDV + T+ GKSF+CILRFDTEVELAY++HGGIL YV Sbjct: 696 LGLTGHERFTIDLPSNVGEIRPGQDVAVVTDTGKSFSCILRFDTEVELAYFDHGGILQYV 755 Query: 283 IRNM 272 IRN+ Sbjct: 756 IRNL 759
>ACOC_SOLTU (O04916) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) (Fragment) Length = 616 Score = 104 bits (260), Expect = 1e-22 Identities = 47/64 (73%), Positives = 56/64 (87%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTI+LP ++ +IRPGQDVT+ T+ GKSFTCI+RFDTEVELAY+NHGGIL YV Sbjct: 550 LGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCIVRFDTEVELAYFNHGGILQYV 609 Query: 283 IRNM 272 IR + Sbjct: 610 IRQL 613
>ACOC_ARATH (Q42560) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate| hydro-lyase) (Aconitase) Length = 898 Score = 101 bits (251), Expect = 1e-21 Identities = 46/64 (71%), Positives = 54/64 (84%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT E YTI LP +V +I+PGQDVT+ T +GKSFTC LRFDTEVELAY++HGGIL YV Sbjct: 832 LGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYV 891 Query: 283 IRNM 272 IRN+ Sbjct: 892 IRNL 895
>IREB1_MOUSE (P28271) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 73.6 bits (179), Expect = 2e-13 Identities = 35/65 (53%), Positives = 47/65 (72%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTIN+P D ++P V I + GK+F ++RFDT+VEL Y+++GGIL Y+ Sbjct: 827 LGLTGRERYTINIPED---LKPRMTVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYM 883 Query: 283 IRNMA 269 IR MA Sbjct: 884 IRKMA 888
>IREB1_RAT (Q63270) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 69.3 bits (168), Expect = 5e-12 Identities = 33/65 (50%), Positives = 46/65 (70%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTI++P ++P V I + GK+F ++RFDT+VEL Y+++GGIL Y+ Sbjct: 827 LGLTGRERYTIHIPE---HLKPRMKVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYM 883 Query: 283 IRNMA 269 IR MA Sbjct: 884 IRKMA 888
>IREB1_CHICK (Q90875) Iron-responsive element binding protein (IRE-BP) (Iron| regulatory protein) (IRP) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 68.6 bits (166), Expect = 8e-12 Identities = 33/65 (50%), Positives = 47/65 (72%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTI +P + ++P ++ I + GK+F I+RFDT+VEL Y+++GGIL Y+ Sbjct: 827 LGLTGRERYTIIIPEN---LKPQMNIQIKLDTGKTFHAIMRFDTDVELTYFHNGGILNYM 883 Query: 283 IRNMA 269 IR MA Sbjct: 884 IRKMA 888
>IREB1_HUMAN (P21399) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 66.2 bits (160), Expect = 4e-11 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTI +P + ++P V + + GK+F ++RFDT+VEL Y+ +GGIL Y+ Sbjct: 827 LGLTGQERYTIIIPEN---LKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYM 883 Query: 283 IRNMA 269 IR MA Sbjct: 884 IRKMA 888
>ACOC_CAEEL (Q23500) Probable aconitate hydratase, cytoplasmic (EC 4.2.1.3)| (Citrate hydro-lyase) (Aconitase) Length = 887 Score = 65.5 bits (158), Expect = 7e-11 Identities = 31/64 (48%), Positives = 43/64 (67%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT E+++I +P D ++PGQ + + +G F I RFDTEVEL YY +GGIL Y+ Sbjct: 825 LGLTGKEQFSIGVPDD---LKPGQLIDVNVSNGSVFQVICRFDTEVELTYYRNGGILQYM 881 Query: 283 IRNM 272 IR + Sbjct: 882 IRKL 885
>IREB1_RABIT (Q01059) Iron-responsive element-binding protein 1 (IRE-BP 1) (Iron| regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 889 Score = 65.1 bits (157), Expect = 9e-11 Identities = 32/65 (49%), Positives = 44/65 (67%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGLT ERYTI +P + + P V + + GK+F ++RFDT+VEL Y ++GGIL Y+ Sbjct: 827 LGLTGRERYTIIIPEN---LTPRMHVQVKLDTGKTFQAVIRFDTDVELTYLHNGGILNYM 883 Query: 283 IRNMA 269 IR MA Sbjct: 884 IRKMA 888
>ACON_STRMU (Q59938) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 888 Score = 52.0 bits (123), Expect = 8e-07 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDG-KSFTCILRFDTEVELAYYNHGGILPY 287 L LT +E YT+ LP + Q+ V T+++G K F +LRFD + ++ YY +GGILP Sbjct: 821 LQLTGYETYTVELP-EQPQVHDIVKVKATSKEGTKEFQVLLRFDADADIRYYQNGGILPM 879 Query: 286 VIR 278 V+R Sbjct: 880 VVR 882
>ACON1_ECOLI (P25516) Aconitate hydratase 1 (EC 4.2.1.3) (Citrate hydro-lyase 1)| (Aconitase 1) Length = 890 Score = 49.3 bits (116), Expect = 5e-06 Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDV--TITTEDGKS--FTCILRFDTEVELAYYNHGGI 296 LGLT E+ I D+ ++PG V T+T DG C R DT EL YY + GI Sbjct: 824 LGLTGEEKIDIG---DLQNLQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGI 880 Query: 295 LPYVIRNM 272 L YVIRNM Sbjct: 881 LHYVIRNM 888
>IREB2_HUMAN (P48200) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGL+ E +++ P ++ PG + I T GK F+ I F+ +VE+ Y HGG+L +V Sbjct: 902 LGLSGRETFSLTFPEELS---PGITLNIQTSTGKVFSVIASFEDDVEITLYKHGGLLNFV 958 Query: 283 IRNMA 269 R + Sbjct: 959 ARKFS 963
>ACON_STAEQ (Q5HPJ0) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 48.5 bits (114), Expect = 8e-06 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++++ DV Q +VT E+G+ +F I+RFD+ VEL YY HGGIL Sbjct: 834 LGLDGKEEISVDINEDV-QPHDFVNVTAKKENGEIINFKAIVRFDSLVELDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>IREB2_RAT (Q62751) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/62 (37%), Positives = 37/62 (59%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGL+ E ++++ P + + PG + I T GK F+ I F+ +VE+ Y HGG+L +V Sbjct: 902 LGLSGREVFSLSFPEE---LFPGITLNIKTSTGKEFSVIAAFENDVEITLYKHGGLLNFV 958 Query: 283 IR 278 R Sbjct: 959 AR 960
>ACON_STAES (Q8CPC2) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++++ DV Q +VT E+G+ +F I+RFD+ VEL YY HGGIL Sbjct: 834 LGLDGKEEISVDINEDV-QPHDLVNVTAKKENGEIINFKAIVRFDSLVELDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_CORGL (Q8NQ98) Aconitate hydratase (EC 4.2.1.3)| Length = 939 Score = 47.0 bits (110), Expect = 2e-05 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = -2 Query: 463 LGLTXHERYTINLPTDV--GQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGI 296 LGL E + I T + G+ VT T E+G F ++R DT E YY HGGI Sbjct: 867 LGLDGTETFDITGLTALNEGETPKTVKVTATKENGDVVEFDAVVRIDTPGEADYYRHGGI 926 Query: 295 LPYVIRNMAGAQK 257 L YV+R MA + K Sbjct: 927 LQYVLRQMAASSK 939
>IREB2_MOUSE (Q811J3) Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron| regulatory protein 2) (IRP2) Length = 963 Score = 47.0 bits (110), Expect = 2e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYV 284 LGL+ E ++++ P + + PG + I T GK F+ I F +VE+ Y HGG+L +V Sbjct: 902 LGLSGREVFSLSFPEE---LFPGITLNIKTSTGKEFSVIASFANDVEITLYKHGGLLNFV 958 Query: 283 IR 278 R Sbjct: 959 AR 960
>ACON_BACSU (P09339) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 908 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITT--EDGK--SFTCILRFDTEVELAYYNHGGI 296 LGLT E +++ V RP VT+ EDG +F ++RFD+EVE+ YY HGGI Sbjct: 840 LGLTGKEVIEVDVDETV---RPRDLVTVRAINEDGNVTTFEAVVRFDSEVEIDYYRHGGI 896 Query: 295 LPYVIR 278 L V+R Sbjct: 897 LQMVLR 902
>ACON_STAAW (P63434) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_STAAS (Q6G9K9) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_STAAR (Q6GH55) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_STAAN (P99148) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_STAAM (P63433) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_STAAC (Q5HG69) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 901 Score = 45.4 bits (106), Expect = 7e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTEDGK--SFTCILRFDTEVELAYYNHGGILP 290 LGL E ++N+ +V Q VT +DG F ++RFD+ VE+ YY HGGIL Sbjct: 834 LGLDGTEEISVNIDENV-QPHDYVKVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQ 892 Query: 289 YVIRN 275 V+RN Sbjct: 893 MVLRN 897
>ACON_COREF (Q8FTA8) Aconitate hydratase (EC 4.2.1.3)| Length = 937 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = -2 Query: 388 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNMAGA 263 VT T E+G+ F ++R DT E Y+ HGGIL YV+R MA + Sbjct: 894 VTATKENGEKVEFDAVVRIDTPGEADYFRHGGILQYVLRQMAAS 937
>ACON_CORDI (Q6NH63) Aconitate hydratase (EC 4.2.1.3)| Length = 934 Score = 42.4 bits (98), Expect = 6e-04 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = -2 Query: 388 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNMAGA 263 VT T E G F ++R DT E YY +GGIL YV+RNM A Sbjct: 891 VTATKESGDQVEFDAVVRIDTPGEADYYRNGGILQYVLRNMINA 934
>ACON_BRAJA (P70920) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 906 Score = 42.0 bits (97), Expect = 8e-04 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVT--ITTEDG--KSFTCILRFDTEVELAYYNHGGI 296 LGL E+ T+ VG ++P Q +T I + DG + + + R DT EL YY +GGI Sbjct: 839 LGLKGDEKVTLR--GLVGDLKPRQKLTAEIVSGDGSLQRVSLLCRIDTLDELDYYRNGGI 896 Query: 295 LPYVIRNMA 269 L YV+R +A Sbjct: 897 LHYVLRKLA 905
>ACON_CORJK (Q4JVM4) Aconitate hydratase (EC 4.2.1.3)| Length = 936 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%) Frame = -2 Query: 388 VTITTEDGKS--FTCILRFDTEVELAYYNHGGILPYVIRNM 272 VT T E+G+ F + R DT E YY +GGIL +V+RNM Sbjct: 892 VTATKENGEKIEFDAVTRIDTPGEADYYRNGGILQFVLRNM 932
>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 961 Score = 39.7 bits (91), Expect = 0.004 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = -2 Query: 370 DGKSFTCILRFDTEVELAYYNHGGILPYVIRNM 272 D F ++R DT E YY +GGIL YV+RNM Sbjct: 925 DAAEFDAVVRIDTPGEADYYRNGGILQYVLRNM 957
>ACON_LEGPH (P37032) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) (Major iron-containing protein) (MICP) (IP210) Length = 891 Score = 39.3 bits (90), Expect = 0.005 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -2 Query: 463 LGLTXHERYTINLPTDVGQIRPGQDVTITTE----DGKSFTCILRFDTEVELAYYNHGGI 296 L L ER +I + ++ PG V +T E D + + R DT EL YY +GGI Sbjct: 825 LKLDGSERISIEISD---KLTPGAMVPVTIERQDGDIEKIETLCRIDTADELEYYKNGGI 881 Query: 295 LPYVIRNMA 269 L YV+R ++ Sbjct: 882 LQYVLRKIS 890
>VPA_BP186 (P41064) Replication gene A protein (GpA)| Length = 694 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/72 (22%), Positives = 30/72 (41%) Frame = +2 Query: 134 FIFGLFIRPQHNEQTLDVHGGTNKTAMPPSRSKRVCGRVRLFLSSCHVADYIGQDASMVV 313 F+ GL + + + + A P R + R+R F + C+ Y+G+ ++ Sbjct: 265 FLKGLDLEDEEGNRISLIEKYDGSVANPAIRRCELMARIRGFENICNELGYVGEFYTLTA 324 Query: 314 VGQLHLCVKAKY 349 + H KA Y Sbjct: 325 PSKYHATTKAGY 336
>NCAP_PI1HC (P24304) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 524 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = -2 Query: 430 NLPTDVGQIRPGQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPY-----VIRNMAG 266 NL D+ ++R D+ ++ FTCILR E A N+ + Y V++N A Sbjct: 288 NLRPDINKLRSLVDIYLSKGARAPFTCILRDPVHGEFAPGNYPALWSYAMGVAVVQNKA- 346 Query: 265 AQK*ANAATYPFRPRWRHGSLVSATVDIK 179 Q+ TY + G V+ D K Sbjct: 347 MQQYVTGRTYLDMEMFLLGQAVAKDADSK 375
>CDK7_MOUSE (Q03147) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (Protein-tyrosine kinase MPK-7) (CR4 protein kinas Length = 346 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Frame = +3 Query: 42 EDLFKMNTCFITT------TKLPPSRPAPTPGMEMP 131 + LF N C TT TK +RP PTPG ++P Sbjct: 273 QGLFLFNPCTRTTASQALKTKYFSNRPGPTPGCQLP 308
>ALLP_ECOLI (P75712) Putative allantoin permease (Allantoin transport protein)| Length = 484 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/80 (25%), Positives = 41/80 (51%) Frame = -2 Query: 247 AATYPFRPRWRHGSLVSATVDIKSLLIMLWPYE*TENKAGISMPGVGAGRLGGSLVVVMK 68 AA P + +++G L+++ + SLLI W ++ + + +G G LG + V+M Sbjct: 338 AAIAPTKLTYKNGVLIASII---SLLICPWKLMENQDSIYLFLDIIG-GMLGPVIGVMMA 393 Query: 67 HVFILNKSSVVVXLNW*XPG 8 H F++ + + + + PG Sbjct: 394 HYFVVMRGQINLDELYTAPG 413
>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6| Length = 737 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 47 FVQNEHMFHNHNQTPPKSTCAHARHGNASFIFGLFIRPQHNEQTLD 184 F+ F N TP K C ARH S G +RP ++ TLD Sbjct: 329 FLPANFSFKNPASTPTKLVCIRARH---SLSTGAVLRPLLHKYTLD 371
>CH60_DROME (O02649) 60 kDa heat shock protein, mitochondrial precursor (Hsp60)| (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) Length = 573 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -2 Query: 397 GQDVTITTEDGKSFTCILRFDTEVELAYYNHGGILPYVIRNMAGAQ 260 G+D IT +DGK+ T L +E ++ G I PY I + GA+ Sbjct: 190 GRDGVITVKDGKTLTDELEV---IEGMKFDRGYISPYFINSSKGAK 232
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -3 Query: 273 WQELRNRRTRPHTLFDLDGGMAVLL--VPPWTSRVCSLCCGLMNKPKIKL-AFPCLAWAQ 103 +++ R R FD D A+ + V PWT V C G M+ I + + LA A Sbjct: 906 YEQTRRCTLRGMLDFDFDSSQAIPIEQVEPWTEIVRRFCTGAMSYGSISMESHSSLAIAM 965 Query: 102 VDLGG 88 LGG Sbjct: 966 NRLGG 970
>DIP2A_MOUSE (Q8BWT5) Disco-interacting protein 2 homolog A| Length = 1523 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -2 Query: 445 ERYTINLPTDVGQIRPGQDVTITTEDGKSFTC 350 E+ ++ DVGQ+ PG V + DG + C Sbjct: 661 EKLSVLTVQDVGQVMPGASVCVVKVDGAPYLC 692
>AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assembly protein| AP47 homolog) (Clathrin coat-associated protein AP47 homolog) (Golgi adaptor AP-1 47 kDa protein homolog) (HA1 47 kDa subunit homolog) (Clathrin assembly protein assembly protein Length = 418 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 240 HTLFDLDGGMAVLLVPPWTSRVCSLCCGLMNKPKIKLAFP 121 H+LF ++GG AV L W S V C + + ++K P Sbjct: 3 HSLFLMNGGGAVFLEKHWRSVVSRSVCAYLLEAQLKAGQP 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,818,574 Number of Sequences: 219361 Number of extensions: 1680354 Number of successful extensions: 4965 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4949 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
