ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104603.1| Zea mays PCO113315 mRNA sequence 52 0.001
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.064
3dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.064
4dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.064
5gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome... 44 0.25
6gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complet... 44 0.25
7emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chrom... 44 0.25
8emb|CR762487.7| Zebrafish DNA sequence from clone CH211-197G14 i... 44 0.25
9emb|AL121590.11|HSJ167O22 Human DNA sequence from clone RP1-167O... 42 1.0
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
12emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial se... 42 1.0
13ref|XM_527029.1| PREDICTED: Pan troglodytes protocadherin alpha ... 40 4.0
14gb|AF022647.1| Fusobacterium nucleatum plasmid pPA52, complete s... 40 4.0
15gb|AF159249.1| Fusobacterium nucleatum plasmid pFN1, complete se... 40 4.0
16gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL... 40 4.0
17ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA... 40 4.0
18ref|NM_031410.1| Homo sapiens protocadherin alpha 1 (PCDHA1), tr... 40 4.0
19ref|NM_018900.2| Homo sapiens protocadherin alpha 1 (PCDHA1), tr... 40 4.0
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.0
21gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome 40 4.0
22gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Can... 40 4.0
23ref|XM_648131.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 4.0
24emb|Z82899.2|HS181N1 Human DNA sequence from clone RP1-181N1 on ... 40 4.0
25gb|AC009779.18| Homo sapiens 12 BAC RP11-644F5 (Roswell Park Can... 40 4.0
26gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, compl... 40 4.0
27gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 4.0
28gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome... 40 4.0
29gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, compl... 40 4.0
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
32gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.0
33dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
34dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
35dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
36dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.0
37emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, co... 40 4.0
38emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in... 40 4.0
39gb|AF152305.1|AF152305 Homo sapiens protocadherin alpha 1 (PCDH-... 40 4.0
40gb|AF152479.1|AF152479 Homo sapiens protocadherin alpha 1 short ... 40 4.0
41gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, comple... 40 4.0 
>gb|AY104603.1| Zea mays PCO113315 mRNA sequence
          Length = 1601

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 238  gattgtgccatcatcaaagcgggccttttgtaca 271
            |||||||||||||||||||| ||| |||||||||
Sbjct: 1329 gattgtgccatcatcaaagcaggcattttgtaca 1296
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 238      gattgtgccatcatcaaagcgggccttttgtacagccat 276
                |||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 22851949 gattgtgccatcatcaaacctggcattttgtacaaccat 22851987



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       tacattttacattgccaaca 53
                ||||||||||||||||||||
Sbjct: 39907836 tacattttacattgccaaca 39907817
to top
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0700A11
          Length = 136321

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 238   gattgtgccatcatcaaagcgggccttttgtacagccat 276
             |||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 55506 gattgtgccatcatcaaacctggcattttgtacaaccat 55544
to top
>dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L13, full
            insert sequence
          Length = 1556

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 238  gattgtgccatcatcaaagcgggccttttgtacagccat 276
            |||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 1232 gattgtgccatcatcaaacctggcattttgtacaaccat 1194
to top
>gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome 7, complete sequence
          Length = 165569

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 123   ttttattttgctacaaaaacaaataa 148
             ||||||||| ||||||||||||||||
Sbjct: 15585 ttttattttactacaaaaacaaataa 15610
to top
>gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complete sequence
          Length = 133624

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 123    ttttattttgctacaaaaacaaataa 148
              ||||||||| ||||||||||||||||
Sbjct: 120438 ttttattttactacaaaaacaaataa 120463
to top
>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete
              sequence
          Length = 173310

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 123    ttttattttgctacaaaaacaaataa 148
              ||||||||| ||||||||||||||||
Sbjct: 166832 ttttattttactacaaaaacaaataa 166807
to top
>emb|CR762487.7| Zebrafish DNA sequence from clone CH211-197G14 in linkage group 13,
             complete sequence
          Length = 219918

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 39    tttacattgccaacaaactgcacaaa 64
             ||||||||||||||||||| ||||||
Sbjct: 41802 tttacattgccaacaaactacacaaa 41827
to top
>emb|AL121590.11|HSJ167O22 Human DNA sequence from clone RP1-167O22 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 74974

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    aaacatcatttatttagttta 107
             |||||||||||||||||||||
Sbjct: 36992 aaacatcatttatttagttta 36972
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 85       ataaacatcatttatttagtt 105
                |||||||||||||||||||||
Sbjct: 25932452 ataaacatcatttatttagtt 25932432
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 85       ataaacatcatttatttagtt 105
                |||||||||||||||||||||
Sbjct: 25860628 ataaacatcatttatttagtt 25860608
to top
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
             library Monsanto from chromosome 12 of cultivar Nipponbare
             of ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 61296

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    ataaacatcatttatttagtt 105
             |||||||||||||||||||||
Sbjct: 42837 ataaacatcatttatttagtt 42857
to top
>ref|XM_527029.1| PREDICTED: Pan troglodytes protocadherin alpha 3 (LOC471651), mRNA
          Length = 6684

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 55   actgcacaaatagtgccacccact 78
            ||||||| ||||||||||||||||
Sbjct: 1439 actgcaccaatagtgccacccact 1416
to top
>gb|AF022647.1| Fusobacterium nucleatum plasmid pPA52, complete sequence
          Length = 6281

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  ttgctacaaaaacaaataat 149
            ||||||||||||||||||||
Sbjct: 5207 ttgctacaaaaacaaataat 5226
to top
>gb|AF159249.1| Fusobacterium nucleatum plasmid pFN1, complete sequence
          Length = 5887

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  ttgctacaaaaacaaataat 149
            ||||||||||||||||||||
Sbjct: 2322 ttgctacaaaaacaaataat 2341
to top
>gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL H155), complete
              sequence
          Length = 157970

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     actgcacaaatagtgccacccact 78
              ||||||| ||||||||||||||||
Sbjct: 104078 actgcaccaatagtgccacccact 104101
to top
>ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA@) on chromosome 5
          Length = 297736

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    actgcacaaatagtgccacccact 78
             ||||||| ||||||||||||||||
Sbjct: 53893 actgcaccaatagtgccacccact 53870
to top
>ref|NM_031410.1| Homo sapiens protocadherin alpha 1 (PCDHA1), transcript variant 2,
            mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 55   actgcacaaatagtgccacccact 78
            ||||||| ||||||||||||||||
Sbjct: 1730 actgcaccaatagtgccacccact 1707
to top
>ref|NM_018900.2| Homo sapiens protocadherin alpha 1 (PCDHA1), transcript variant 1,
            mRNA
          Length = 5260

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 55   actgcacaaatagtgccacccact 78
            ||||||| ||||||||||||||||
Sbjct: 1730 actgcaccaatagtgccacccact 1707
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 126      tattttgctacaaaaacaaataat 149
                |||||||||| |||||||||||||
Sbjct: 20896600 tattttgctaaaaaaacaaataat 20896577
to top
>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
          Length = 490885

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    attttgctacaaaaacaaat 146
              ||||||||||||||||||||
Sbjct: 333714 attttgctacaaaaacaaat 333695
to top
>gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   catagaaaataggaacaagg 201
             ||||||||||||||||||||
Sbjct: 41380 catagaaaataggaacaagg 41399
to top
>ref|XM_648131.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (90.t00024) partial mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 185 agaaaataggaacaaggggaataacaaa 212
           ||||||||||||||| || |||||||||
Sbjct: 269 agaaaataggaacaatggtaataacaaa 296
to top
>emb|Z82899.2|HS181N1 Human DNA sequence from clone RP1-181N1 on chromosome Xq24-25 Contains
             part of the GRIA3 gene for glutamate receptor,
             ionotrophic, AMPA 3, complete sequence
          Length = 126474

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    ggaaataaacatcatttatttagt 104
             |||||||||||||| |||||||||
Sbjct: 29309 ggaaataaacatcaattatttagt 29286
to top
>gb|AC009779.18| Homo sapiens 12 BAC RP11-644F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192550

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     aacatcatttatttagttta 107
              ||||||||||||||||||||
Sbjct: 119176 aacatcatttatttagttta 119195
to top
>gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, complete sequence
          Length = 91296

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ctacaaaaacaaataatgat 152
             ||||||||||||||||||||
Sbjct: 47263 ctacaaaaacaaataatgat 47244
to top
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     agcttttcagccgcatagaa 188
               ||||||||||||||||||||
Sbjct: 1463892 agcttttcagccgcatagaa 1463873
to top
>gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome 8, complete sequence
          Length = 220673

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ttacattgccaacaaactgcacaa 63
              |||||||||||||||| |||||||
Sbjct: 206650 ttacattgccaacaaaatgcacaa 206627
to top
>gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, complete sequence
          Length = 135503

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ataaacatcatttatttagt 104
             ||||||||||||||||||||
Sbjct: 68625 ataaacatcatttatttagt 68606
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      cgccttttattttgctacaa 138
                ||||||||||||||||||||
Sbjct: 13032605 cgccttttattttgctacaa 13032586
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 126      tattttgctacaaaaacaaataat 149
                |||||||||| |||||||||||||
Sbjct: 20889629 tattttgctaaaaaaacaaataat 20889606
to top
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12
             map MAP_LOC, complete sequence
          Length = 167323

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   tattttgctacaaaaacaaataat 149
             |||||||||| |||||||||||||
Sbjct: 25912 tattttgctaaaaaaacaaataat 25935
to top
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004D12
          Length = 138136

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tacattttacattgccaaca 53
             ||||||||||||||||||||
Sbjct: 88544 tacattttacattgccaaca 88525
to top
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cgccttttattttgctacaa 138
             ||||||||||||||||||||
Sbjct: 71406 cgccttttattttgctacaa 71387
to top
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0577H07
          Length = 126757

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cgccttttattttgctacaa 138
              ||||||||||||||||||||
Sbjct: 114982 cgccttttattttgctacaa 114963
to top
>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   tttgtacagccatatgcaca 283
             ||||||||||||||||||||
Sbjct: 66000 tttgtacagccatatgcaca 66019
to top
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence
          Length = 267826

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 125   ttattttgctacaaaaacaaataa 148
             ||||||||| ||||||||||||||
Sbjct: 81817 ttattttgcaacaaaaacaaataa 81794
to top
>emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in linkage group 18,
             complete sequence
          Length = 139084

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 125   ttattttgctacaaaaacaaataa 148
             ||||||||| ||||||||||||||
Sbjct: 17281 ttattttgcaacaaaaacaaataa 17258
to top
>gb|AF152305.1|AF152305 Homo sapiens protocadherin alpha 1 (PCDH-alpha1) mRNA, complete cds
          Length = 5260

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 55   actgcacaaatagtgccacccact 78
            ||||||| ||||||||||||||||
Sbjct: 1730 actgcaccaatagtgccacccact 1707
to top
>gb|AF152479.1|AF152479 Homo sapiens protocadherin alpha 1 short form protein (PCDH-alpha1)
            variable region sequence, complete cds
          Length = 2424

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 55   actgcacaaatagtgccacccact 78
            ||||||| ||||||||||||||||
Sbjct: 1730 actgcaccaatagtgccacccact 1707
to top
>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence
          Length = 169338

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ttacattgccaacaaactgcacaa 63
              |||||||||||||||| |||||||
Sbjct: 143016 ttacattgccaacaaaatgcacaa 143039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,897,850
Number of Sequences: 3902068
Number of extensions: 3897850
Number of successful extensions: 69661
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69429
Number of HSP's gapped (non-prelim): 232
length of query: 303
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 281
effective length of database: 17,147,199,772
effective search space: 4818363135932
effective search space used: 4818363135932
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top