>gb|AY145451.1| Hordeum vulgare actin mRNA, complete cds
          Length = 1421

 Score =  295 bits (149), Expect = 2e-77
 Identities = 170/178 (95%), Gaps = 1/178 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cccacaaacacactgacaatgtcacaaacatagatagtgtacttgcacttgcaccatgga 60
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 cccacaaacacactgacaatg-cacaaacatagatagtgtacttgcacttgcaccatgga 1303

                                                                        
Query: 61   gccgccacgtatataggtggcgtatcccaagagtacccacgtcacgtctggnnnnnnnca 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||       ||
Sbjct: 1302 gccgccacgtatataggtggcgtatcccaagagtacccacgtcacgtctggaaaaaaaca 1243

                                                                      
Query: 121  tagcttgcaaatacgcaatacatttctagaagaatgaaccaaacataaccgaagacta 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 tagcttgcaaatacgcaatacatttctagaagaatgaaccaaacataaccgaagacta 1185

>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score =  234 bits (118), Expect = 7e-59
 Identities = 157/170 (92%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cacaaacacactgacaatgtcacaaacatagata--gtgtacttgcacttgcaccatgga 60
            ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||
Sbjct: 9018 cacaaacacactgacaata-cacaaacatagatatagtgtacttgcacttgcaccatgga 9076

                                                                        
Query: 61   gccgccacgtatataggtggcgtatcccaagagtacccacgtcacgtctggnnnnnnnca 120
            ||||||||||||||||||||| |||||||||||||| ||||||||||||||       ||
Sbjct: 9077 gccgccacgtatataggtggcatatcccaagagtactcacgtcacgtctggaaaaaaaca 9136

                                                              
Query: 121  tagcttgcaaatacgcaatacatttctagaagaatgaaccaaacataacc 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9137 tagcttgcaaatacgcaatacatttctagaagaatgaaccaaacataacc 9186

>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score =  210 bits (106), Expect = 1e-51
 Identities = 138/150 (92%), Gaps = 2/150 (1%)
 Strand = Plus / Plus

                                                                         
Query: 23    cacaaacatagata--gtgtacttgcacttgcaccatggagccgccacgtatataggtgg 80
             ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 17647 cacaaacatagatatagtgtacttgcacttgcaccatggagccgccacgtatataggtag 17706

                                                                         
Query: 81    cgtatcccaagagtacccacgtcacgtctggnnnnnnncatagcttgcaaatacgcaata 140
             | |||||||||||||| ||||||||||||||       ||||||||||||||||||||||
Sbjct: 17707 catatcccaagagtactcacgtcacgtctggaaaaaaacatagcttgcaaatacgcaata 17766

                                           
Query: 141   catttctagaagaatgaaccaaacataacc 170
             ||||||||||||||||||||||||||||||
Sbjct: 17767 catttctagaagaatgaaccaaacataacc 17796

>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 152     gaatgaaccaaacataaccgaa 173
               ||||||||||||||||||||||
Sbjct: 1010549 gaatgaaccaaacataaccgaa 1010570

>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1
          Length = 206420

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    aatgaaccaaacataaccgaa 173
              |||||||||||||||||||||
Sbjct: 144757 aatgaaccaaacataaccgaa 144737

>gb|AY096529.1| Arabidopsis thaliana unknown protein (AT4g36950) mRNA, complete cds
          Length = 1042

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 aatgaaccaaacataaccgaa 173
           |||||||||||||||||||||
Sbjct: 920 aatgaaccaaacataaccgaa 900

>gb|AY070367.1| Arabidopsis thaliana unknown protein (At4g36950) mRNA, complete cds
          Length = 1345

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 153 aatgaaccaaacataaccgaa 173
           |||||||||||||||||||||
Sbjct: 976 aatgaaccaaacataaccgaa 956

>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
          Length = 198780

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    aatgaaccaaacataaccgaa 173
              |||||||||||||||||||||
Sbjct: 110477 aatgaaccaaacataaccgaa 110497

>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence
          Length = 215696

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     ttgcacttgcaccatggag 61
              |||||||||||||||||||
Sbjct: 159406 ttgcacttgcaccatggag 159388

>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence
          Length = 225829

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   aatacatttctagaagaat 155
             |||||||||||||||||||
Sbjct: 69778 aatacatttctagaagaat 69796

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 17      caatgtcacaaacatagat 35
               |||||||||||||||||||
Sbjct: 2993528 caatgtcacaaacatagat 2993510

>gb|AC163670.3| Mus musculus BAC clone RP23-31C13 from chromosome 12, complete sequence
          Length = 214651

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     acactgacaatgtcacaaa 28
              |||||||||||||||||||
Sbjct: 160060 acactgacaatgtcacaaa 160042

>emb|AL035064.1|SPAC1687 S.pombe chromosome I cosmid c1687
          Length = 41757

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 157   aaccaaacataaccgaaga 175
             |||||||||||||||||||
Sbjct: 37530 aaccaaacataaccgaaga 37512

>gb|AC154755.2| Mus musculus BAC clone RP24-406B22 from chromosome 13, complete sequence
          Length = 180363

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 159    ccaaacataaccgaagact 177
              |||||||||||||||||||
Sbjct: 143134 ccaaacataaccgaagact 143116

>gb|AY208121.1| Sus scrofa myostatin gene, complete cds
          Length = 167404

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 138    atacatttctagaagaatg 156
              |||||||||||||||||||
Sbjct: 114482 atacatttctagaagaatg 114464

>gb|AY113254.1| Drosophila melanogaster AT14373 full insert cDNA
          Length = 1455

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  tgcaccatggagccgccac 68
           |||||||||||||||||||
Sbjct: 360 tgcaccatggagccgccac 378

>ref|NM_170238.1| Drosophila melanogaster CG4774-RC, transcript variant C (CG4774),
           mRNA
          Length = 1358

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  tgcaccatggagccgccac 68
           |||||||||||||||||||
Sbjct: 279 tgcaccatggagccgccac 297

>ref|NM_170237.1| Drosophila melanogaster CG4774-RB, transcript variant B (CG4774),
           mRNA
          Length = 1439

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  tgcaccatggagccgccac 68
           |||||||||||||||||||
Sbjct: 360 tgcaccatggagccgccac 378

>ref|NM_143161.1| Drosophila melanogaster CG4774-RA, transcript variant A (CG4774),
           mRNA
          Length = 1329

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  tgcaccatggagccgccac 68
           |||||||||||||||||||
Sbjct: 250 tgcaccatggagccgccac 268

>ref|NM_001018535.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1687.20c),
            partial mRNA
          Length = 2019

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 157  aaccaaacataaccgaaga 175
            |||||||||||||||||||
Sbjct: 1097 aaccaaacataaccgaaga 1115

>emb|BX248509.4| Zebrafish DNA sequence from clone CH211-113O22, complete sequence
          Length = 61707

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     cacaaacacactgacaatg 21
             |||||||||||||||||||
Sbjct: 25150 cacaaacacactgacaatg 25132

>gb|AC010580.5|AC010580 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
             BACR48J06, complete sequence
          Length = 163970

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    tgcaccatggagccgccac 68
             |||||||||||||||||||
Sbjct: 30467 tgcaccatggagccgccac 30449

>gb|AC010579.9|AC010579 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
              BACR09D08, complete sequence
          Length = 167396

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     tgcaccatggagccgccac 68
              |||||||||||||||||||
Sbjct: 118410 tgcaccatggagccgccac 118392

>gb|AC096650.1| Homo sapiens BAC clone RP11-16H9 from 2, complete sequence
          Length = 33716

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 138   atacatttctagaagaatg 156
             |||||||||||||||||||
Sbjct: 28698 atacatttctagaagaatg 28716

>emb|BX294379.5| Zebrafish DNA sequence from clone DKEY-7A20 in linkage group 1,
             complete sequence
          Length = 214290

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 141   catttctagaagaatgaaccaaa 163
             ||||| |||||||||||||||||
Sbjct: 78966 catttatagaagaatgaaccaaa 78944

>gb|AE003753.3| Drosophila melanogaster chromosome 3R, section 91 of 118 of the
             complete sequence
          Length = 226793

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    tgcaccatggagccgccac 68
             |||||||||||||||||||
Sbjct: 25483 tgcaccatggagccgccac 25465

>gb|AC102534.10| Mus musculus chromosome 8, clone RP23-57G23, complete sequence
          Length = 223998

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     aatgtcacaaacatagata 36
              |||||||||||||||||||
Sbjct: 190145 aatgtcacaaacatagata 190163

>emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, complete sequence
          Length = 124954

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      cacaaacacactgacaatg 21
              |||||||||||||||||||
Sbjct: 110450 cacaaacacactgacaatg 110432

>emb|AL672009.19| Zebrafish DNA sequence from clone BUSM1-137H13 in linkage group 1,
             complete sequence
          Length = 67888

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 141   catttctagaagaatgaaccaaa 163
             ||||| |||||||||||||||||
Sbjct: 50018 catttatagaagaatgaaccaaa 49996

>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete
             sequence
          Length = 174961

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    acactgacaatgtcacaaa 28
             |||||||||||||||||||
Sbjct: 27598 acactgacaatgtcacaaa 27580

>dbj|AB004690.1| Schizosaccharomyces pombe gene for Mis6, complete cds
          Length = 2510

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 157  aaccaaacataaccgaaga 175
            |||||||||||||||||||
Sbjct: 1413 aaccaaacataaccgaaga 1431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,244,662
Number of Sequences: 3902068
Number of extensions: 1244662
Number of successful extensions: 79199
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79130
Number of HSP's gapped (non-prelim): 62
length of query: 178
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 156
effective length of database: 17,147,199,772
effective search space: 2674963164432
effective search space used: 2674963164432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)