ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28i22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT011133.1| Drosophila melanogaster HL01056 full insert cDNA 42 1.6
2gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, comple... 42 1.6
3gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell... 42 1.6
4emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 i... 42 1.6
5gb|AY122142.1| Drosophila melanogaster HL02867 full insert cDNA 42 1.6
6ref|NM_206622.2| Drosophila melanogaster CG32776-RB, transcript ... 42 1.6
7ref|NM_166996.2| Drosophila melanogaster CG32776-RA, transcript ... 42 1.6
8ref|NM_001038741.1| Drosophila melanogaster CG32776-RC, transcri... 42 1.6
9ref|NM_001038740.1| Drosophila melanogaster CG32776-RD, transcri... 42 1.6
10emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 i... 42 1.6
11gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 ... 42 1.6
12gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome... 40 6.5
13gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromo... 40 6.5
14ref|XM_705503.1| Candida albicans SC5314 putative spliceosomal t... 40 6.5
15ref|XM_705490.1| Candida albicans SC5314 putative spliceosomal t... 40 6.5
16emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, co... 40 6.5
17gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complet... 40 6.5
18gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome... 40 6.5
19emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chro... 40 6.5
20emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 o... 40 6.5
21emb|AL590422.15| Human DNA sequence from clone RP11-444D13 on ch... 40 6.5
22emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chr... 40 6.5
23emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 6.5
24emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chro... 40 6.5
25gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, compl... 40 6.5
26emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 ... 40 6.5
27gb|AC104458.2| Homo sapiens chromosome 1 clone RP5-1102E8, compl... 40 6.5
28gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complet... 40 6.5
29gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 6.5
30gb|AC133597.5| Mus musculus BAC clone RP24-313B5 from chromosome... 40 6.5
31dbj|AK084722.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.5
32dbj|AK084705.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.5
33gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O... 40 6.5
34gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete... 40 6.5
35gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complet... 40 6.5
36gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, comple... 40 6.5
37emb|BX470142.4| Zebrafish DNA sequence from clone CH211-59C17 in... 40 6.5
38emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 ... 40 6.5
39emb|BX276107.12| Zebrafish DNA sequence from clone CH211-218C17 ... 40 6.5
40dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.5
41emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chr... 40 6.5
42gb|AC139155.3| Mus musculus BAC clone RP24-209E3 from 13, comple... 40 6.5
43dbj|AP001628.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.5
44dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.5
45dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiestera... 40 6.5 
>gb|BT011133.1| Drosophila melanogaster HL01056 full insert cDNA
          Length = 3148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 457 gcttcaccggcagcgggtacctggg 481
           |||||||||| ||||||||||||||
Sbjct: 406 gcttcaccggtagcgggtacctggg 382
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>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence
          Length = 195428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   caaagaactagaggtcttgga 189
             |||||||||||||||||||||
Sbjct: 71378 caaagaactagaggtcttgga 71398
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>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160100

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 457   gcttcaccggcagcgggtacctggg 481
             |||||||||| ||||||||||||||
Sbjct: 40734 gcttcaccggtagcgggtacctggg 40710
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>emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 in linkage group 18,
             complete sequence
          Length = 95339

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 317   caaagacaacacaacagtcaa 337
             |||||||||||||||||||||
Sbjct: 54424 caaagacaacacaacagtcaa 54444
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>gb|AY122142.1| Drosophila melanogaster HL02867 full insert cDNA
          Length = 3251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 457 gcttcaccggcagcgggtacctggg 481
           |||||||||| ||||||||||||||
Sbjct: 509 gcttcaccggtagcgggtacctggg 485
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>ref|NM_206622.2| Drosophila melanogaster CG32776-RB, transcript variant B (CG32776),
            mRNA
          Length = 3981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 457  gcttcaccggcagcgggtacctggg 481
            |||||||||| ||||||||||||||
Sbjct: 1238 gcttcaccggtagcgggtacctggg 1214
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>ref|NM_166996.2| Drosophila melanogaster CG32776-RA, transcript variant A (CG32776),
           mRNA
          Length = 3252

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 457 gcttcaccggcagcgggtacctggg 481
           |||||||||| ||||||||||||||
Sbjct: 509 gcttcaccggtagcgggtacctggg 485
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>ref|NM_001038741.1| Drosophila melanogaster CG32776-RC, transcript variant C (CG32776),
           mRNA
          Length = 3255

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 457 gcttcaccggcagcgggtacctggg 481
           |||||||||| ||||||||||||||
Sbjct: 512 gcttcaccggtagcgggtacctggg 488
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>ref|NM_001038740.1| Drosophila melanogaster CG32776-RD, transcript variant D (CG32776),
            mRNA
          Length = 3984

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 457  gcttcaccggcagcgggtacctggg 481
            |||||||||| ||||||||||||||
Sbjct: 1241 gcttcaccggtagcgggtacctggg 1217
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>emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 in linkage group 18,
            complete sequence
          Length = 120346

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 317  caaagacaacacaacagtcaa 337
            |||||||||||||||||||||
Sbjct: 8337 caaagacaacacaacagtcaa 8317
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>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete
              sequence
          Length = 326403

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 457    gcttcaccggcagcgggtacctggg 481
              |||||||||| ||||||||||||||
Sbjct: 137519 gcttcaccggtagcgggtacctggg 137543
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>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence
          Length = 182658

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    acagactcagatgacacaca 106
             ||||||||||||||||||||
Sbjct: 96729 acagactcagatgacacaca 96748
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>gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromosome 12 centromeric
              region
          Length = 326112

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    acacacataagcaaataaaa 119
              ||||||||||||||||||||
Sbjct: 208660 acacacataagcaaataaaa 208641
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>ref|XM_705503.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.144), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cttcttcttcatcttgcaga 301
           ||||||||||||||||||||
Sbjct: 160 cttcttcttcatcttgcaga 141
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>ref|XM_705490.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.7784), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cttcttcttcatcttgcaga 301
           ||||||||||||||||||||
Sbjct: 160 cttcttcttcatcttgcaga 141
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>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence
          Length = 205764

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     acatagaaaaatagaacaga 91
              ||||||||||||||||||||
Sbjct: 135129 acatagaaaaatagaacaga 135110
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>gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complete sequence
          Length = 133439

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   cacataagcaaataaaagcaaaca 126
             |||||||||||||||||| |||||
Sbjct: 35930 cacataagcaaataaaagtaaaca 35953
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>gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome 14, complete sequence
          Length = 198078

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    aaaaaattcccccaaatttattct 34
             |||||| |||||||||||||||||
Sbjct: 68588 aaaaaaatcccccaaatttattct 68565
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>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete
             sequence
          Length = 176004

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ataagcaaataaaagcaaac 125
             ||||||||||||||||||||
Sbjct: 34130 ataagcaaataaaagcaaac 34149
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>emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 on chromosome Xq21.1-21.33
             Contains a CpG island, complete sequence
          Length = 80730

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acatagaaaaatagaacaga 91
             ||||||||||||||||||||
Sbjct: 55777 acatagaaaaatagaacaga 55758
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>emb|AL590422.15| Human DNA sequence from clone RP11-444D13 on chromosome 1 Contains part
             of the RGL1 gene for ral guanine nucleotide dissociation
             stimulator-like 1 and a novel gene, complete sequence
          Length = 198312

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   taagcaaataaaagcaaaca 126
             ||||||||||||||||||||
Sbjct: 33853 taagcaaataaaagcaaaca 33834
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>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the
             5' end of the C1orf25 gene for chromosome 1 open reading
             frame 25, the 5' end of the C1orf26 gene for chromosome 1
             open reading frame 26 and a CpG island, complete sequence
          Length = 85565

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    aaaaaattcccccaaattta 30
             ||||||||||||||||||||
Sbjct: 80900 aaaaaattcccccaaattta 80881
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      atttattctgattggtacaa 45
               ||||||||||||||||||||
Sbjct: 1623940 atttattctgattggtacaa 1623959
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>emb|AL669833.7| Mouse DNA sequence from clone RP23-51C16 on chromosome 11, complete
             sequence
          Length = 48352

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acatagaaaaatagaacaga 91
             ||||||||||||||||||||
Sbjct: 20066 acatagaaaaatagaacaga 20085
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>gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, complete sequence
          Length = 154057

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  cacataagcaaataaaagca 122
            ||||||||||||||||||||
Sbjct: 6776 cacataagcaaataaaagca 6757
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>emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 in linkage group 18,
              complete sequence
          Length = 183594

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     aacatagaaaaatagaacag 90
              ||||||||||||||||||||
Sbjct: 182373 aacatagaaaaatagaacag 182354
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>gb|AC104458.2| Homo sapiens chromosome 1 clone RP5-1102E8, complete sequence
          Length = 135063

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cacataagcaaataaaagca 122
             ||||||||||||||||||||
Sbjct: 81579 cacataagcaaataaaagca 81560
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>gb|AC079768.8| Homo sapiens BAC clone RP11-205M3 from 4, complete sequence
          Length = 134004

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atgatgaaacaaaaaattcc 20
              ||||||||||||||||||||
Sbjct: 110090 atgatgaaacaaaaaattcc 110109
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>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   actagcaggccttctccctg 237
             ||||||||||||||||||||
Sbjct: 45380 actagcaggccttctccctg 45361
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>gb|AC133597.5| Mus musculus BAC clone RP24-313B5 from chromosome 16, complete sequence
          Length = 192699

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     acagactcagatgacacaca 106
              ||||||||||||||||||||
Sbjct: 192537 acagactcagatgacacaca 192518
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>dbj|AK084722.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330035M07 product:unclassifiable, full
           insert sequence
          Length = 2183

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   gaaacaaaaaattcccccaaattt 29
           |||| |||||||||||||||||||
Sbjct: 792 gaaaaaaaaaattcccccaaattt 769
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>dbj|AK084705.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330034E10 product:unclassifiable, full
           insert sequence
          Length = 2183

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   gaaacaaaaaattcccccaaattt 29
           |||| |||||||||||||||||||
Sbjct: 792 gaaaaaaaaaattcccccaaattt 769
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>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence
          Length = 114802

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  actagcaggccttctccctg 237
            ||||||||||||||||||||
Sbjct: 7045 actagcaggccttctccctg 7064
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>gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete sequence
          Length = 176008

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acatagaaaaatagaacaga 91
             ||||||||||||||||||||
Sbjct: 82773 acatagaaaaatagaacaga 82792
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>gb|AC108205.5| Homo sapiens BAC clone RP11-140N6 from 4, complete sequence
          Length = 132623

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acatagaaaaatagaacaga 91
             ||||||||||||||||||||
Sbjct: 32997 acatagaaaaatagaacaga 33016
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>gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, complete sequence
          Length = 118955

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   acatagaaaaatagaacaga 91
            ||||||||||||||||||||
Sbjct: 5899 acatagaaaaatagaacaga 5880
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>emb|BX470142.4| Zebrafish DNA sequence from clone CH211-59C17 in linkage group 18,
             complete sequence
          Length = 58289

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    aacatagaaaaatagaacag 90
             ||||||||||||||||||||
Sbjct: 40813 aacatagaaaaatagaacag 40832
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>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20,
              complete sequence
          Length = 151552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    aagcaaataaaagcaaacaa 127
              ||||||||||||||||||||
Sbjct: 126303 aagcaaataaaagcaaacaa 126322
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>emb|BX276107.12| Zebrafish DNA sequence from clone CH211-218C17 in linkage group 18,
           complete sequence
          Length = 46296

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  aacatagaaaaatagaacag 90
           ||||||||||||||||||||
Sbjct: 779 aacatagaaaaatagaacag 760
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      gatgaaacaaaaaattcccc 22
              ||||||||||||||||||||
Sbjct: 249893 gatgaaacaaaaaattcccc 249874
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>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete
             sequence
          Length = 215157

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    aaaaaattcccccaaatttattct 34
             |||||| |||||||||||||||||
Sbjct: 17903 aaaaaaatcccccaaatttattct 17880
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>gb|AC139155.3| Mus musculus BAC clone RP24-209E3 from 13, complete sequence
          Length = 161907

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aacaaaaaattcccccaaat 27
             ||||||||||||||||||||
Sbjct: 70645 aacaaaaaattcccccaaat 70664
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>dbj|AP001628.1| Homo sapiens genomic DNA, chromosome 21, clone:KB51A8, MX1-D21S171
             region, complete sequence
          Length = 114835

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     gatgaaacaaaaaattcccc 22
             ||||||||||||||||||||
Sbjct: 11730 gatgaaacaaaaaattcccc 11711
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>dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:KB161B8, MX1-D21S171
             region, complete sequence
          Length = 125376

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     gatgaaacaaaaaattcccc 22
             ||||||||||||||||||||
Sbjct: 83018 gatgaaacaaaaaattcccc 82999
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>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds
          Length = 125000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      gatgaaacaaaaaattcccc 22
              ||||||||||||||||||||
Sbjct: 104326 gatgaaacaaaaaattcccc 104307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,686,451
Number of Sequences: 3902068
Number of extensions: 4686451
Number of successful extensions: 105036
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104941
Number of HSP's gapped (non-prelim): 95
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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