>gb|DQ175904.1| Hordeum vulgare subsp. vulgare clone 28-52A-LB flanking T-DNA
           insertion sequence
          Length = 699

 Score =  624 bits (315), Expect = e-176
 Identities = 319/321 (99%)
 Strand = Plus / Plus

                                                                       
Query: 49  gaagtcagacgtttcaacgactacgaatgggcaacgataccttgcacaagggcgcgttag 108
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  gaagtcagacgtttcaacgactacgaatgggcaacgataccttgcacaagggcgcgttag 93

                                                                       
Query: 109 gaaagcacacaacacagatcctcaaggcaggaccacctattgcccggaacgcacaaacta 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  gaaagcacacaacacagatcctcaaggcaggaccacctattgcccggaacgcacaaacta 153

                                                                       
Query: 169 taatatgcaaggtctaaacatgaacttttaaacaagaaaaattatcgcctggcaccctca 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 taatatgcaaggtctaaacatgaacttttaaacaagaaaaattatcgcctggcaccctca 213

                                                                       
Query: 229 actgaaatttctntagtttttagcaactcccaagcatatgggtcttntaaccaaccagag 288
           |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 214 actgaaatttctctagtttttagcaactcccaagcatatgggtcttctaaccaaccagag 273

                                                                       
Query: 289 ctaagcagacaagctggcccttccttcagcacactccgggactccgatccttgctttggg 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctaagcagacaagctggcccttccttcagcacactccgggactccgatccttgctttggg 333

                                
Query: 349 tattgctccagttcaagcttt 369
           |||||||||||||||||||||
Sbjct: 334 tattgctccagttcaagcttt 354



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 60 tttcaacgactacgaatgggcaacgata 87
          ||||||||||||||||||||||||||||
Sbjct: 6  tttcaacgactacgaatgggcaacgata 33

>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506
          Length = 2027

 Score =  170 bits (86), Expect = 2e-39
 Identities = 199/232 (85%), Gaps = 9/232 (3%)
 Strand = Plus / Minus

                                                                        
Query: 151  cccggaacgcacaaactataatatgcaa-ggtctaaacatgaacttttaa--acaagaaa 207
            ||||||| ||||| |||||||||||||| |||||||||||| | | ||    ||||||||
Sbjct: 1999 cccggaaagcacacactataatatgcaaaggtctaaacatgcattgttcttgacaagaaa 1940

                                                                        
Query: 208  aattatcgcctggcaccctcaa--ctgaaatttctntagtttttagcaactcccaagcat 265
            || ||| |||||||| ||||||  ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 1939 aaatattgcctggcaacctcaaaactgaaatttctctagtttttagcaactcc-aagcac 1881

                                                                        
Query: 266  atgggtcttntaaccaacc---agagctaagcagacaagctggcccttccttcagcacac 322
            ||| ||  | |||||| ||   |||||| ||||||||||||||||||||| | ||| |||
Sbjct: 1880 atgcgtggtctaaccagcccatagagctgagcagacaagctggcccttccgtgagcgcac 1821

                                                                
Query: 323  tccgggactccgatccttgctttgggtattgctccagttcaagctttgcttt 374
            ||||||||||| |||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1820 tccgggactcctatccttcctttgggtactgctccagttcaagctttgcttt 1769

>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2,
             complete sequence
          Length = 70979

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 337   ccttgctttgggtattgctccagt 360
             ||||||||||||||||||||||||
Sbjct: 44745 ccttgctttgggtattgctccagt 44722

>gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, complete sequence
          Length = 212226

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 321   actccgggactccgatccttgcttt 345
             |||| ||||||||||||||||||||
Sbjct: 83021 actcagggactccgatccttgcttt 83045

>emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 in linkage group 6,
              complete sequence
          Length = 163380

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    aaacatgaacttttaaacaa 203
              ||||||||||||||||||||
Sbjct: 101874 aaacatgaacttttaaacaa 101893

>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the
             Stc2 gene for stanniocalcin 2 and three CpG islands,
             complete sequence
          Length = 252980

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gacaagctggcccttccttc 315
             ||||||||||||||||||||
Sbjct: 84631 gacaagctggcccttccttc 84612

>gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, complete sequence
          Length = 145697

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    acaggactctgaagtcagac 58
             ||||||||||||||||||||
Sbjct: 60919 acaggactctgaagtcagac 60900

>gb|AE010179.1| Pyrococcus furiosus DSM 3638, section 54 of 173 of the complete genome
          Length = 13617

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 290   taagcagacaagctggcccttcct 313
             ||||||||||||||||| ||||||
Sbjct: 11057 taagcagacaagctggctcttcct 11080

>gb|AC097066.2| Homo sapiens chromosome 1 clone RP11-575B7, complete sequence
          Length = 168686

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  tctaaacatgaacttttaaa 200
            ||||||||||||||||||||
Sbjct: 3493 tctaaacatgaacttttaaa 3474

>gb|AC027684.3| Homo sapiens chromosome 16 clone RP11-148F10, complete sequence
          Length = 187520

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   caaccagagctaagcagacaagct 303
             |||||||||||||| |||||||||
Sbjct: 39325 caaccagagctaagtagacaagct 39302

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     aacttttaaacaagaaaaat 210
               ||||||||||||||||||||
Sbjct: 1920110 aacttttaaacaagaaaaat 1920129

>gb|AC093515.4| Homo sapiens chromosome 16 clone CTD-2535I10, complete sequence
          Length = 184182

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 280    caaccagagctaagcagacaagct 303
              |||||||||||||| |||||||||
Sbjct: 102792 caaccagagctaagtagacaagct 102769

>emb|AL132877.3|CEY105E8B Caenorhabditis elegans YAC Y105E8B, complete sequence
          Length = 79271

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 228   aactgaaatttctntagttttta 250
             ||||||||||||| |||||||||
Sbjct: 72262 aactgaaatttctatagttttta 72240

>emb|CR352309.9| Zebrafish DNA sequence from clone DKEYP-72H1 in linkage group 20,
              complete sequence
          Length = 142300

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    aaacatgaacttttaaacaa 203
              ||||||||||||||||||||
Sbjct: 128916 aaacatgaacttttaaacaa 128897

>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence
          Length = 208059

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ttttaaacaagaaaaattat 213
              ||||||||||||||||||||
Sbjct: 201208 ttttaaacaagaaaaattat 201227


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,925,207
Number of Sequences: 3902068
Number of extensions: 2925207
Number of successful extensions: 53654
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53609
Number of HSP's gapped (non-prelim): 43
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)