>gb|DQ019628.1| Triticum aestivum alternative splicing regulator (RSZ38) mRNA,
            complete cds
          Length = 1255

 Score =  337 bits (170), Expect = 2e-89
 Identities = 282/317 (88%), Gaps = 5/317 (1%)
 Strand = Plus / Minus

                                                                        
Query: 66   aggaaacagataggaaattcactg-caaaacatcttaaaactttaaatat---gtcacag 121
            ||||||||| |||||||||||||| ||| || ||||||| ||| |||| |   |||||| 
Sbjct: 1156 aggaaacaggtaggaaattcactgacaacacgtcttaaa-cttgaaatgtactgtcacaa 1098

                                                                        
Query: 122  ccacatgtagcgaccagaaactggaaaatggttccatgtttcagggagacgcgcttcttc 181
            ||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||
Sbjct: 1097 ccacatgtagcgagcagaaactggaaaatggttccacgtttcatggagacacgcttcttc 1038

                                                                        
Query: 182  ctctgggtgagccagagccgcgaaggccatcaccgtcaccattgcctcttggacttgggc 241
            |||| |||||||| ||||| ||| | |||||  ||||||||||||| |||||||||||||
Sbjct: 1037 ctctaggtgagcctgagcctcgacgtccatcgtcgtcaccattgccccttggacttgggc 978

                                                                        
Query: 242  tgccaccattaccattgcccttaggactagggctaccgttgntgcccctcgggcttggac 301
            ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 977  tgccaccgttgccattgcccttaggactagggctaccgttgttgcccctcaggcttggac 918

                                                                        
Query: 302  tgcccttgttgtccctggcaggactgggactgccattgttagcagggcttntagggntgc 361
            || || ||||||| |||| |||||||||||||||||||||| |||||||| | ||| |||
Sbjct: 917  tggccctgttgtctctggtaggactgggactgccattgttaacagggcttcttgggctgc 858

                             
Query: 362  gcccattggccacaggg 378
            |||||||||||||||||
Sbjct: 857  gcccattggccacaggg 841

>gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence
          Length = 1011

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 355 gggntgcgcccattggccacaggg 378
           ||| ||||||||||||||||||||
Sbjct: 699 gggctgcgcccattggccacaggg 676

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 242     tgccaccattaccattgccct 262
               |||||||||||||||||||||
Sbjct: 6098082 tgccaccattaccattgccct 6098102

>gb|AY104051.1| Zea mays PCO093410 mRNA sequence
          Length = 1288

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 355 gggntgcgcccattggccacaggg 378
           ||| ||||||||||||||||||||
Sbjct: 967 gggctgcgcccattggccacaggg 944

>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
              sequence
          Length = 191270

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 45     gagcaacaaaataccaggtttagga 69
              ||||||||||||||||| |||||||
Sbjct: 157383 gagcaacaaaataccagctttagga 157407

>gb|AC153148.4| Mus musculus BAC clone RP23-189N11 from chromosome 5, complete sequence
          Length = 229020

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     catcttaaaactttaaatat 114
              ||||||||||||||||||||
Sbjct: 177920 catcttaaaactttaaatat 177939

>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    ccagaaactggaaaatggtt 154
              ||||||||||||||||||||
Sbjct: 139615 ccagaaactggaaaatggtt 139634

>gb|AC121563.3| Mus musculus BAC clone RP23-198C23 from chromosome 3, complete sequence
          Length = 208350

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ccagaaactggaaaatggtt 154
              ||||||||||||||||||||
Sbjct: 147625 ccagaaactggaaaatggtt 147606

>gb|AC115629.3| Mus musculus BAC clone RP23-74J16 from chromosome 5, complete sequence
          Length = 242126

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     catcttaaaactttaaatat 114
              ||||||||||||||||||||
Sbjct: 102179 catcttaaaactttaaatat 102198

>ref|XM_385692.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05516.1)
           partial mRNA
          Length = 3375

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 tcacagccacatgtagcgac 135
           ||||||||||||||||||||
Sbjct: 784 tcacagccacatgtagcgac 765

>ref|XM_720128.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04852)
            partial mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   ttaaaactttaaatatgtca 118
            ||||||||||||||||||||
Sbjct: 1147 ttaaaactttaaatatgtca 1128

>emb|AL358976.11| Human DNA sequence from clone RP11-147I11 on chromosome 9 Contains a H3
             histone pseudogene, a novel gene, the DMRT2 gene for
             doublesex and mab-3 related transcription factor 2 and 4
             CpG islands, complete sequence
          Length = 110098

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    atcttaaaactttaaatatg 115
             ||||||||||||||||||||
Sbjct: 96292 atcttaaaactttaaatatg 96311

>emb|X94995.1|JSPCHS1 Juglans nigra x Juglans regia mRNA for chalcone synthase (CHS1)
          Length = 1525

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 tcttggacttgggctgccaccatt 251
           |||||||||||||||||| |||||
Sbjct: 500 tcttggacttgggctgcccccatt 477

>emb|X94706.1|JSPCHS2 Juglans nigra x Juglans regia mRNA for chalcone synthase (CHS2)
          Length = 1534

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 tcttggacttgggctgccaccatt 251
           |||||||||||||||||| |||||
Sbjct: 509 tcttggacttgggctgcccccatt 486

>gb|AF534873.1| Spirodela polyrhiza chalcone synthase (CHS) gene, partial cds
          Length = 482

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 tcttggacttgggctgccaccatt 251
           |||||||||||||||||| |||||
Sbjct: 36  tcttggacttgggctgcccccatt 13

>gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chromosome unknown, complete
              sequence
          Length = 221631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     cactgcaaaacatcttaaaa 104
              ||||||||||||||||||||
Sbjct: 218941 cactgcaaaacatcttaaaa 218922

>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   cctggcaggactgggactgc 334
             ||||||||||||||||||||
Sbjct: 49669 cctggcaggactgggactgc 49688

>emb|BX001037.13| Zebrafish DNA sequence from clone DKEY-107I16 in linkage group 6,
             complete sequence
          Length = 92347

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aacatcttaaaactttaaat 112
             ||||||||||||||||||||
Sbjct: 63100 aacatcttaaaactttaaat 63081

>gb|AC016566.6| Homo sapiens chromosome 5 clone CTC-547G6, complete sequence
          Length = 170545

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     cttaaaactttaaatatgtc 117
              ||||||||||||||||||||
Sbjct: 141231 cttaaaactttaaatatgtc 141212

>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown,
             complete sequence
          Length = 196429

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cactgcaaaacatcttaaaa 104
             ||||||||||||||||||||
Sbjct: 39541 cactgcaaaacatcttaaaa 39522

>gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence
          Length = 178498

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    caacaaaataccaggtttag 67
             ||||||||||||||||||||
Sbjct: 19212 caacaaaataccaggtttag 19231

>gb|AC107450.5| Homo sapiens chromosome X clone CTD-2173L12 map q28, complete sequence
          Length = 115757

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    caacaaaataccaggtttag 67
             ||||||||||||||||||||
Sbjct: 46569 caacaaaataccaggtttag 46588

>gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, complete sequence
          Length = 242913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   ccctggcaggactgggactg 333
             ||||||||||||||||||||
Sbjct: 99193 ccctggcaggactgggactg 99174

>gb|AC156357.3| Carollia perspicillata clone 84E8, complete sequence
          Length = 64472

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   taaaactttaaatatgtcac 119
             ||||||||||||||||||||
Sbjct: 40355 taaaactttaaatatgtcac 40374

>emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains
             a ribosomal protein L3 (RPL3) pseudogenee, the OSTM1 gene
             for osteopetrosis associated transmembrane, the 5' end of
             a novel gene and three CpG islands, complete sequence
          Length = 153382

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cactgcaaaacatcttaaaa 104
             ||||||||||||||||||||
Sbjct: 69893 cactgcaaaacatcttaaaa 69874

>emb|AL772299.10| Mouse DNA sequence from clone RP23-158L6 on chromosome 2, complete
             sequence
          Length = 203368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    aaacatcttaaaactttaaa 111
             ||||||||||||||||||||
Sbjct: 35360 aaacatcttaaaactttaaa 35379

>gb|U41105.2| Caenorhabditis elegans cosmid T02G5, complete sequence
          Length = 31951

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    aaaacatcttaaaactttaaatat 114
             |||| |||||||||||||||||||
Sbjct: 23041 aaaagatcttaaaactttaaatat 23064

>emb|AJ427474.1|OOS427474 Ostertagia ostertagi partial mRNA for cytochrome c oxidase, clone
           F177f
          Length = 538

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  caacaaaataccaggtttag 67
           ||||||||||||||||||||
Sbjct: 154 caacaaaataccaggtttag 135

>dbj|AB046666.1| Scutellaria baicalensis CHS-C mRNA for chalcone synthase, complete
           cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 tcttggacttgggctgccaccatt 251
           |||||||||||||||||| |||||
Sbjct: 384 tcttggacttgggctgcccccatt 361

>dbj|AB008748.1| Scutellaria baicalensis mRNA for chalcone synthase, complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 tcttggacttgggctgccaccatt 251
           |||||||||||||||||| |||||
Sbjct: 438 tcttggacttgggctgcccccatt 415

>emb|AL669836.9| Mouse DNA sequence from clone RP23-79H8 on chromosome 2, complete
             sequence
          Length = 141877

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 218   caccattgcctcttggacttgggctgcc 245
             |||| ||||||| |||||||||||||||
Sbjct: 58118 cacctttgcctcatggacttgggctgcc 58091


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,231,288
Number of Sequences: 3902068
Number of extensions: 3231288
Number of successful extensions: 75805
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75757
Number of HSP's gapped (non-prelim): 48
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)