ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS4_MAIZE (O22424) 40S ribosomal protein S4 132 3e-31
2RS4_SOLTU (P46300) 40S ribosomal protein S4 129 3e-30
3RS4_PRUAR (O81363) 40S ribosomal protein S4 127 1e-29
4RS4_ARATH (P49204) 40S ribosomal protein S4 127 2e-29
5RS4_GOSHI (P46299) 40S ribosomal protein S4 126 2e-29
6RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620) 97 1e-25
7RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1 105 5e-23
8RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform 105 5e-23
9RS4_XENTR (Q6PBC4) 40S ribosomal protein S4 104 1e-22
10RS4_XENLA (P49401) 40S ribosomal protein S4 104 1e-22
11RS4_CRIGR (P47961) 40S ribosomal protein S4 104 1e-22
12RS4_CHICK (P47836) 40S ribosomal protein S4 104 1e-22
13RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform 104 1e-22
14RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform 104 1e-22
15RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform 104 1e-22
16RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform 104 1e-22
17RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single ... 104 1e-22
18RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform 104 1e-22
19RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform 104 1e-22
20RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform 101 7e-22
21RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1 100 1e-21
22RS4_DROME (P41042) 40S ribosomal protein S4 100 2e-21
23RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1 100 2e-21
24RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1 100 2e-21
25RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1 99 5e-21
26RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1 99 6e-21
27RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1 99 6e-21
28RS4_ICTPU (Q90YS0) 40S ribosomal protein S4 98 1e-20
29RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2 96 3e-20
30RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2 96 5e-20
31RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B 89 6e-18
32RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C 88 1e-17
33RS4A_SCHPO (P87158) 40S ribosomal protein S4-A 88 1e-17
34RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5) 84 2e-16
35RS4_YARLI (O59950) 40S ribosomal protein S4 (S7) 83 4e-16
36RS4_CANAL (P47837) 40S ribosomal protein S4 (S7) 80 2e-15
37RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4 77 3e-14
38RS4_DICDI (P51405) 40S ribosomal protein S4 76 3e-14
39RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment) 41 0.001
40RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment) 41 0.001
41FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (... 33 0.25
42Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977 31 1.2
43LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.... 31 1.6
44YCGV_ECO57 (Q8X583) Hypothetical protein ycgV 30 2.7
45YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-) 30 3.5
46EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1) (Inte... 28 7.9
47MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 7.9
48MRAW_BACCZ (Q636A8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 7.9
49MRAW_BACC1 (P62468) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 7.9
50MRAW_BACAN (Q81WC3) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 7.9
51TRPG_CRYNE (Q5KC22) Anthranilate synthase component 2 (EC 4.1.3.... 28 7.9 
>RS4_MAIZE (O22424) 40S ribosomal protein S4|
          Length = 265

 Score =  132 bits (333), Expect = 3e-31
 Identities = 66/89 (74%), Positives = 70/89 (78%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KIVDFIKFD                 VIKNREKHKG+FETIHVED+ GHQFATR+GNVFT
Sbjct: 168 KIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFT 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKRD 180
           IGKG KPWVSLPKGKGIKL+IIEEQRKRD
Sbjct: 228 IGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
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>RS4_SOLTU (P46300) 40S ribosomal protein S4|
          Length = 264

 Score =  129 bits (324), Expect = 3e-30
 Identities = 62/88 (70%), Positives = 70/88 (79%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KIVDFIKFD                 VIKNREKHKG+FET+H++D+QGH+FATRLGNVFT
Sbjct: 168 KIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFT 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           +GKGTKPWVSLPKGKGIKLTIIE+ RKR
Sbjct: 228 LGKGTKPWVSLPKGKGIKLTIIEDARKR 255
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>RS4_PRUAR (O81363) 40S ribosomal protein S4|
          Length = 261

 Score =  127 bits (320), Expect = 1e-29
 Identities = 63/88 (71%), Positives = 68/88 (77%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VIKNREKHKG+FETIHV+DA GH+FATRLGNVFT
Sbjct: 164 KITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFT 223

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKGTKPWVSLPKGKGIKLTI+EE +KR
Sbjct: 224 IGKGTKPWVSLPKGKGIKLTILEEAKKR 251
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>RS4_ARATH (P49204) 40S ribosomal protein S4|
          Length = 262

 Score =  127 bits (318), Expect = 2e-29
 Identities = 62/88 (70%), Positives = 69/88 (78%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KIV+FIKFD                 VIKNREKHKG+FETIH++D+ GH+FATRLGNV+T
Sbjct: 168 KIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYT 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKGTKPWVSLPKGKGIKLTIIEE RKR
Sbjct: 228 IGKGTKPWVSLPKGKGIKLTIIEEARKR 255
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>RS4_GOSHI (P46299) 40S ribosomal protein S4|
          Length = 262

 Score =  126 bits (317), Expect = 2e-29
 Identities = 64/88 (72%), Positives = 68/88 (77%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KIVDFIKFD                 VIKNREKHKG+FETIHV+DA GH+FATRLGNVFT
Sbjct: 168 KIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFT 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKGTKPWVSLPK KGIKL+IIEE RKR
Sbjct: 228 IGKGTKPWVSLPKRKGIKLSIIEEARKR 255
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>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)|
          Length = 268

 Score = 96.7 bits (239), Expect(2) = 1e-25
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -3

Query: 344 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 198
           KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE
Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253



 Score = 38.1 bits (87), Expect(2) = 1e-25
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 447 QDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 337
           Q+  LHQ       HGDW  ++ A WCDQ+QGEA G+
Sbjct: 172 QELRLHQGLMLAMCHGDW-RRNTAVWCDQQQGEAKGS 207
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>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  105 bits (262), Expect = 5e-23
 Identities = 50/88 (56%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NREKH G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  105 bits (262), Expect = 5e-23
 Identities = 50/88 (56%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NREKH G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_XENLA (P49401) 40S ribosomal protein S4|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_CRIGR (P47961) 40S ribosomal protein S4|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4_CHICK (P47836) 40S ribosomal protein S4|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant|
           mRNA protein) (SCR10)
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  101 bits (252), Expect = 7e-22
 Identities = 48/88 (54%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKF+                 VI NREKH G+F+ +HV+D+ G+ FATRL N+F 
Sbjct: 167 KITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KPWVSLP+GKG++LTI EE+ KR
Sbjct: 227 IGKGNKPWVSLPRGKGVRLTIAEERDKR 254
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>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  100 bits (250), Expect = 1e-21
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI++FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAEERDKR 254
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>RS4_DROME (P41042) 40S ribosomal protein S4|
          Length = 261

 Score =  100 bits (249), Expect = 2e-21
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI D+IKFD                  + NRE+H G+F+ +H++D+QGH FATRL NVF 
Sbjct: 168 KITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFI 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG KP++SLPKGKG+KL+I EE+ KR
Sbjct: 228 IGKGNKPYISLPKGKGVKLSIAEERDKR 255
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>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  100 bits (249), Expect = 2e-21
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI++FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  100 bits (248), Expect = 2e-21
 Identities = 45/88 (51%), Positives = 60/88 (68%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI++FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAEERDKR 254
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>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 46/88 (52%), Positives = 58/88 (65%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 45/88 (51%), Positives = 59/88 (67%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI++FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAAERDKR 254
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>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 45/88 (51%), Positives = 59/88 (67%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI++FIKFD                 VI NRE+H G+F+ +HV+DA G+ FATRL N+F 
Sbjct: 167 KIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTVAAERDKR 254
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>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4|
          Length = 262

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI +FIKFD                 VI NRE+H G+F+ +HV+D+ G+ FATRL N+F 
Sbjct: 167 KITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG K WVS+P+GKGI+LTI EE+ KR
Sbjct: 227 IGKGNKAWVSIPRGKGIRLTIAEERDKR 254
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>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 45/88 (51%), Positives = 57/88 (64%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                 VI NRE+H G+ + +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 44/88 (50%), Positives = 57/88 (64%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                 V+ NRE+H G+ + +HV+DA G+ FATR+ N+F 
Sbjct: 167 KITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 227 IGNGNKPWISLPRGKGIRLTIAEERDKR 254
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>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B|
          Length = 262

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                  I +RE H G+FE IHV+DA   +FATRL NVF 
Sbjct: 168 KIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFV 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 228 IGEAGKSWISLPKGKGVKLSITEERDRR 255
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>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C|
          Length = 262

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                  I +RE H G+FE IHV+DA   +FATRL NVF 
Sbjct: 168 KIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFV 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 228 IGETGKSWISLPKGKGVKLSITEERDRR 255
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>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A|
          Length = 262

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                  I +RE H G+FE IHV+DA   +FATRL NVF 
Sbjct: 168 KIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFV 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 228 IGETGKSWISLPKGKGVKLSITEERDRR 255
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>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)|
          Length = 260

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 40/88 (45%), Positives = 55/88 (62%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI DFIKFD                  I ++E+H G F+ +H++D+  + F TRL NVF 
Sbjct: 167 KITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG+  KP++SLPKGKGIKL+I EE+ +R
Sbjct: 227 IGEQGKPYISLPKGKGIKLSIAEERDRR 254
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>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)|
          Length = 260

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 40/88 (45%), Positives = 54/88 (61%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  F+KF+                  I +RE+H+G F+ +H++DA  +QF TRL NVF 
Sbjct: 168 KITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFV 227

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG+G K  +SLPKGKGIKL+I EE+  R
Sbjct: 228 IGEGNKSLISLPKGKGIKLSIAEERDAR 255
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>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)|
          Length = 262

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FIKFD                 VI +REK +G F+ +H++DA  + F TRL NVF 
Sbjct: 168 KIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFV 227

Query: 266 IG-KGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IG +  KPWVSLPKGKGIKL+I EE+ +R
Sbjct: 228 IGTEAGKPWVSLPKGKGIKLSISEERDRR 256
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>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4|
          Length = 259

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 39/88 (44%), Positives = 52/88 (59%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI D +KF+                 +I +RE+  G  + IH++D+ GH FATR+ NVF 
Sbjct: 167 KITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFV 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQRKR 183
           IGKG K  VSLP G GI+L+I EE+ KR
Sbjct: 227 IGKGNKALVSLPTGAGIRLSIAEERDKR 254
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>RS4_DICDI (P51405) 40S ribosomal protein S4|
          Length = 266

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 36/85 (42%), Positives = 51/85 (60%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFT 267
           KI  FI F+                  + +REKH G+F+ +HV D  GHQFATRL NVF 
Sbjct: 167 KITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFI 226

Query: 266 IGKGTKPWVSLPKGKGIKLTIIEEQ 192
           IGK ++ +VSLP GKG++ + ++E+
Sbjct: 227 IGKASQTFVSLPAGKGVRRSRVDER 251
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>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 309
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 149 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
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>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -3

Query: 446 KIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 309
           KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 149 KITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -3

Query: 365 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 225
           +K R++H+G  ++I+  D  GH+F    G+VF      +  KP +S  +G
Sbjct: 95  LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
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>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977|
          Length = 199

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = +3

Query: 264 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 353
           NG H      V + GGKL  +G+L  D LKGSL +L
Sbjct: 36  NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
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>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
           (Late nodulin 56) (N-56)
          Length = 565

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -3

Query: 350 KHKGTFETIHVEDAQGHQFATRLGNV 273
           KHKGT+ETI  E+  GH+  TR+G V
Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
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>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV|
          Length = 547

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 341 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 243
           GTF T++VE+  G+       +V   G G KPW
Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
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>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 321 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNN 443
           ++ LK +  L+P  D    H N  +VA T H   + D+  D+++N
Sbjct: 72  IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISN 116
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>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)|
           (Intersectin-EH-binding protein 1) (Ibp1)
          Length = 566

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +2

Query: 227 PWGGSPKAWCPCQW*TRCPDGWQTGDPGHPQRGWSQRFPYA 349
           PWGG+P    P       PD W + D G P  G     P+A
Sbjct: 324 PWGGTP---APAAGEGPTPDPWGSSDGGAPVSGPPSSDPWA 361
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>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 294 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 434
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
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>MRAW_BACCZ (Q636A8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 294 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 434
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
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>MRAW_BACC1 (P62468) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 294 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 434
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
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>MRAW_BACAN (Q81WC3) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 294 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 434
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
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>TRPG_CRYNE (Q5KC22) Anthranilate synthase component 2 (EC 4.1.3.27)|
           (Anthranilate synthase component II) [Includes:
           Glutamine amidotransferase; Indole-3-glycerol phosphate
           synthase (EC 4.1.1.48) (IGPS);
           N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3
          Length = 752

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +3

Query: 201 NDGELDTLAL--GEAHPRLGALANGEHVAQTGGKLVTLGILN-----VDGLKGSLMLLPV 359
           +DGEL+ + +  G  HPR  +  + + +A   GKL  LG+       VD L G +     
Sbjct: 46  SDGELERIVISPGPGHPRTDSGVSRDVIAWGMGKLPILGVCMGLECIVDLLGGEIAYAGE 105

Query: 360 LDHTNTPSVAPTSHHDDV 413
           + H  T  V     HD +
Sbjct: 106 IKHGKTSLV----QHDSI 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,939,452
Number of Sequences: 219361
Number of extensions: 1275572
Number of successful extensions: 3499
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3477
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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