ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28i04 |
|---|---|
| Clone Library Name | barley_pub |
>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1| Length = 304 Score = 140 bits (354), Expect = 9e-34 Identities = 68/82 (82%), Positives = 75/82 (91%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +EEPEK+Q HFSEY+KKGI AD MEA+YKKVHAAIRADP+MAKSTK P THKRYN KKL Sbjct: 213 EEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKL 272 Query: 242 TYEERKASLVERLNALNNSAGA 177 TYE+RKASLVERLNALN+SAGA Sbjct: 273 TYEQRKASLVERLNALNSSAGA 294
>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2| Length = 304 Score = 139 bits (351), Expect = 2e-33 Identities = 67/82 (81%), Positives = 75/82 (91%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +EEPEK+Q HFSEY+KKGI AD ME++YKKVHAAIRADP+MAKSTK P THKRYN KKL Sbjct: 213 EEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKL 272 Query: 242 TYEERKASLVERLNALNNSAGA 177 TYE+RKASLVERLNALN+SAGA Sbjct: 273 TYEQRKASLVERLNALNSSAGA 294
>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5| Length = 302 Score = 127 bits (320), Expect = 8e-30 Identities = 60/80 (75%), Positives = 70/80 (87%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 ++EPEKYQ+HFSEYIKKGI AD++E +YKKVHAAIRA+P KS KP PK HKRYN KKL Sbjct: 212 EDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKL 271 Query: 242 TYEERKASLVERLNALNNSA 183 TY+ERKA LVERLNALN++A Sbjct: 272 TYDERKARLVERLNALNSAA 291
>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)| Length = 121 Score = 119 bits (297), Expect = 4e-27 Identities = 56/81 (69%), Positives = 66/81 (81%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 ++EPEKYQ+HFS YIK ++ D++E +YKKVHAAIR DPS KS K PKTHKRYN KKL Sbjct: 31 EDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKL 90 Query: 242 TYEERKASLVERLNALNNSAG 180 TYEERKA L+ERLNALN + G Sbjct: 91 TYEERKAKLIERLNALNAAGG 111
>RL5_ARATH (P49227) 60S ribosomal protein L5| Length = 301 Score = 114 bits (286), Expect = 7e-26 Identities = 53/81 (65%), Positives = 65/81 (80%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 ++EPEK QTHFS YIKKG+ A+ +E +YKKVHAAIRA+P+ K+ K APK HKRYN KKL Sbjct: 212 EDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKL 271 Query: 242 TYEERKASLVERLNALNNSAG 180 TYEERK L+ER+ ALN + G Sbjct: 272 TYEERKNKLIERVKALNGAGG 292
>RL5_STYCL (Q26481) 60S ribosomal protein L5| Length = 294 Score = 67.4 bits (163), Expect = 1e-11 Identities = 32/66 (48%), Positives = 47/66 (71%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ E ++ FS+YIK G++AD +E +Y K HAAIR DP+ K T A KT KR+N KK+ Sbjct: 212 EEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKM 270 Query: 242 TYEERK 225 T+ +R+ Sbjct: 271 TFSQRR 276
>RL5_BOMMO (O76190) 60S ribosomal protein L5| Length = 299 Score = 67.4 bits (163), Expect = 1e-11 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 8/82 (9%) Frame = -2 Query: 419 EEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKL 243 ++ + ++ FS+YIK G++AD +EA+YKK H AIRADPS K K KR+N +KL Sbjct: 214 DDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKL 273 Query: 242 TYEER-------KASLVERLNA 198 T ER KAS ++RL A Sbjct: 274 TLAERKNRIKQKKASFIKRLQA 295
>RL5_CAEEL (P49405) 60S ribosomal protein L5| Length = 293 Score = 67.0 bits (162), Expect = 2e-11 Identities = 31/72 (43%), Positives = 51/72 (70%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ ++Y+ FS+++ G++AD++ A Y+KVH+AIRAD S A K A K KR+ K+L Sbjct: 212 EEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRL 269 Query: 242 TYEERKASLVER 207 TY+ERK + ++ Sbjct: 270 TYDERKQRVADK 281
>RL5_HELAN (O65353) 60S ribosomal protein L5| Length = 297 Score = 62.8 bits (151), Expect = 3e-10 Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKK 246 +E+ E Y+ FS+YIK G++AD +E +YKK H AIRA+P+ K A PK KR+ KK Sbjct: 213 EEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKK 270 Query: 245 LTYEERKASL 216 LT E+R+ + Sbjct: 271 LTREQRQGKV 280
>RL5_DUNSA (O22608) 60S ribosomal protein L5| Length = 271 Score = 62.0 bits (149), Expect = 5e-10 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 249 +EEPEKYQ HFS Y++ I D +E +YK+VHA IR +P K + P KR++P+ Sbjct: 211 EEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268
>RL5B_XENLA (P15126) 60S ribosomal protein L5-B| Length = 295 Score = 62.0 bits (149), Expect = 5e-10 Identities = 29/72 (40%), Positives = 46/72 (63%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK G++AD +E +YKK HA IR +P K K K KR+N KL Sbjct: 212 EEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKL 270 Query: 242 TYEERKASLVER 207 + E++K + ++ Sbjct: 271 SLEQKKDRVAQK 282
>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)| Length = 301 Score = 60.8 bits (146), Expect = 1e-09 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 8/86 (9%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK------- 264 D++ E+Y++ F+ YI+ + AD +E +Y + HAAIR DP K+ APK K Sbjct: 216 DDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAES 274 Query: 263 -RYNPKKLTYEERKASLVERLNALNN 189 +Y KLT E+R A + ER+ AL + Sbjct: 275 LKYKKSKLTREQRAAGVQERIAALRS 300
>RL5A_XENLA (P15125) 60S ribosomal protein L5-A| Length = 295 Score = 60.8 bits (146), Expect = 1e-09 Identities = 29/72 (40%), Positives = 46/72 (63%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK G++AD +E +YKK HA IR +P K K K KR+N KL Sbjct: 212 EEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKL 270 Query: 242 TYEERKASLVER 207 + E++K + ++ Sbjct: 271 SLEQKKDRVAQK 282
>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B| Length = 294 Score = 60.1 bits (144), Expect = 2e-09 Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 3/86 (3%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNP 252 D++ E+YQ FS I GI +D +E +Y + +A IR DPS KS K A +Y Sbjct: 213 DDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQ 272 Query: 251 KKLTYEERKASLVERLNALNNSAGAA 174 +KLT EERK ER NA AG A Sbjct: 273 RKLTAEERK----ERFNAKVIEAGRA 294
>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A| Length = 294 Score = 58.2 bits (139), Expect = 8e-09 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 3/86 (3%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNP 252 D++ E+YQ FS I GI +D +E +Y + +A IR DPS KS K A ++ Sbjct: 213 DDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQ 272 Query: 251 KKLTYEERKASLVERLNALNNSAGAA 174 +KLT EERK ER NA AG A Sbjct: 273 RKLTAEERK----ERFNAKVIEAGRA 294
>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5| Length = 296 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK ++ D ME +YKK HAAIR +P K K K KR+N K+ Sbjct: 212 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKM 270 Query: 242 TYEERKASLVER 207 + ++K + ++ Sbjct: 271 SLAQKKDRVAQK 282
>RL5_HUMAN (P46777) 60S ribosomal protein L5| Length = 296 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK ++ D ME +YKK HAAIR +P K K K KR+N K+ Sbjct: 212 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKM 270 Query: 242 TYEERKASLVER 207 + ++K + ++ Sbjct: 271 SLAQKKDRVAQK 282
>RL5_RAT (P09895) 60S ribosomal protein L5| Length = 296 Score = 55.8 bits (133), Expect = 4e-08 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK ++ D ME +YKK HAAIR +P K K K KR+N K+ Sbjct: 212 EEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKM 270 Query: 242 TYEERKASLVER 207 + ++K + ++ Sbjct: 271 SLAQKKDRVAQK 282
>RL5_MOUSE (P47962) 60S ribosomal protein L5| Length = 296 Score = 55.8 bits (133), Expect = 4e-08 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK ++ D ME +YKK HAAIR +P K K K KR+N K+ Sbjct: 212 EEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKM 270 Query: 242 TYEERKASLVER 207 + ++K + ++ Sbjct: 271 SLAQKKDRVAQK 282
>RL5_CHICK (P22451) 60S ribosomal protein L5| Length = 296 Score = 55.5 bits (132), Expect = 5e-08 Identities = 28/72 (38%), Positives = 43/72 (59%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKL 243 +E+ + Y+ FS+YIK I+ D ME +YKK HAAIR +P K K K KR N K+ Sbjct: 212 EEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKM 270 Query: 242 TYEERKASLVER 207 + ++K + ++ Sbjct: 271 SLAQKKDRVAQK 282
>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S| RNA-binding protein) Length = 296 Score = 52.8 bits (125), Expect = 3e-07 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRY 258 D++ E++ F Y+ I AD +E +Y H AIRADP+ + K K K+Y Sbjct: 212 DDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKY 271 Query: 257 NPKKLTYEERKASLVERLNAL 195 KL+ EER A + ++ AL Sbjct: 272 RQTKLSKEERAARVAAKIAAL 292
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 258 +E+ E ++ FS+YI GI ADD+E +YK HA+IR PS + +P++ R+ Sbjct: 213 EEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268
>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674| Length = 581 Score = 33.5 bits (75), Expect = 0.21 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = -2 Query: 401 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 234 +TH + KGI +Y+++H + + ++ A KP+P H R + K+ YE Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386
>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P| Length = 202 Score = 33.1 bits (74), Expect = 0.27 Identities = 10/38 (26%), Positives = 27/38 (71%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 309 +E+PE+Y+ FS+Y+++G+ +++ +++V + I + Sbjct: 161 EEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198
>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)| Length = 101 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -2 Query: 383 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 207 Y +K + D HAAIR +P K K K KR+N K++ ++K + ++ Sbjct: 30 YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87
>RL18_METVA (P14033) 50S ribosomal protein L18P| Length = 195 Score = 29.3 bits (64), Expect = 3.9 Identities = 10/34 (29%), Positives = 23/34 (67%) Frame = -2 Query: 419 EEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 318 E+ E Y+ FS+Y++KG++ +D+ ++++ I Sbjct: 159 EDEEAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192
>RL18_METJA (P54044) 50S ribosomal protein L18P| Length = 195 Score = 29.3 bits (64), Expect = 3.9 Identities = 9/35 (25%), Positives = 24/35 (68%) Frame = -2 Query: 422 DEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 318 +++ E+Y+ FS+Y++KG+ + + ++++ A I Sbjct: 157 EQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191
>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein tyrosine phosphatase-NP) (PTP-NP) Length = 1001 Score = 29.3 bits (64), Expect = 3.9 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 252 QEAHLRGEEGQPRREAQRPQQL 187 QE+H RG EGQPR + P+ + Sbjct: 340 QESHGRGAEGQPREQTDAPETM 361
>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1| (VPS20-associated protein 1) Length = 330 Score = 28.9 bits (63), Expect = 5.1 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -2 Query: 368 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNN 189 I+ D+ + V K+V + PS +PA HK Y +LT +AS +E++ L Sbjct: 248 ITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDELTKIMDRASKIEQIQKLAK 302 Query: 188 SAGAA 174 A +A Sbjct: 303 YAISA 307
>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1| (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) (Zinc finger protein rapa) Length = 1200 Score = 28.9 bits (63), Expect = 5.1 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 297 QINQASSQ--DSQEVQPQEAHLRGEEGQPRREAQRPQQL 187 Q QA Q QE+Q Q +R + QP + Q+PQQL Sbjct: 274 QQQQAGQQRISMQEIQTQPQQIRPSQPQPPPQQQQPQQL 312
>PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50)| Length = 458 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 279 SQDSQEVQPQEAHLRGEEGQPRREAQRPQQ 190 SQ + V+P ++ R EG P R+ +RP Q Sbjct: 167 SQHRKSVRPGASYKRQNEGNPERDKERPVQ 196
>INVO_AOTTR (P24708) Involucrin| Length = 544 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Frame = -1 Query: 300 GQINQASSQDSQ-----EVQPQEAHLRGEEGQPRREAQRPQQL 187 GQ+ Q Q+ Q + + Q HL +EGQP+ Q +QL Sbjct: 300 GQLKQLEEQEGQVKHLEQQEEQLKHLEQQEGQPKHPEQLEKQL 342
>RL4_BIFLO (Q8G416) 50S ribosomal protein L4| Length = 218 Score = 24.6 bits (52), Expect(2) = 7.2 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 371 GISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 270 G+SA+D++A +H + A + A+ A KT Sbjct: 27 GVSAEDVQAHIPLIHQVVTAQLAAARQGTHATKT 60 Score = 22.3 bits (46), Expect(2) = 7.2 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = -2 Query: 284 PAPKTHKRYNPKKLTYEERKASLVERLNA 198 P P+ + + PKK+ + +L +R NA Sbjct: 99 PQPRDYSQRTPKKMKAAALRYALSDRANA 127
>INVO_PIG (P18175) Involucrin| Length = 347 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 297 QINQASSQDSQEVQPQEAHLRGEEGQPRREAQRPQQL 187 Q+ + Q Q+ + QE H + E + + EAQR QQL Sbjct: 272 QVQEVQQQQQQQQEQQEDHQKAEHLE-QEEAQREQQL 307
>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin) Length = 1004 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 252 QEAHLRGEEGQPRREAQRPQQL 187 QE+H RG EGQ R +A P+++ Sbjct: 341 QESHGRGAEGQLREQADAPEEM 362
>VE7_HPV53 (P36832) Protein E7| Length = 105 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = -1 Query: 303 HGQINQASSQDSQEVQPQEAHLRGEEGQPRREAQRP-----QQLCWC 178 H Q+N + +D EV HL+ + Q RR+ Q P Q C C Sbjct: 26 HEQLNSSEDEDEDEVD----HLQEQPQQARRDEQHPCYLIETQCCRC 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,704,095 Number of Sequences: 219361 Number of extensions: 800590 Number of successful extensions: 2707 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2695 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
