ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108832.1| Zea mays PCO121636 mRNA sequence 113 5e-22
2ref|XM_464221.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
3ref|XM_506725.1| PREDICTED Oryza sativa (japonica cultivar-group... 58 3e-05
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
5dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
6dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7dbj|AK070569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
8dbj|AK066725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
10dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
11dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
12dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
13gb|CP000013.1| Borrelia garinii PBi, complete genome 48 0.026
14ref|XM_342563.2| PREDICTED: Rattus norvegicus ARP5 actin-related... 48 0.026
15ref|XM_479416.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
16emb|AJ223176.1|SGAJ3176 Streptomyces granaticolor pkg4, pkg3 gen... 44 0.40
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
19gb|M92914.1|DROMASTM Drosophila virilis mastermind gene, complet... 44 0.40
20gb|M35146.1|HS5E1P Murine cytomegalovirus early transcription un... 44 0.40
21gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, compl... 44 0.40
22ref|XM_470360.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
23ref|NM_188196.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
24gb|BC084249.1| Xenopus laevis SWI/SNF related, matrix associated... 42 1.6
25gb|AY376492.1| Cercopithecus aethiops mitochondrial DNA polymera... 42 1.6
26ref|XM_591114.2| PREDICTED: Bos taurus similar to ARP5 actin-rel... 42 1.6
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
28ref|XR_001562.1| PREDICTED: Mus musculus similar to p47 protein ... 42 1.6
29ref|XR_002529.1| PREDICTED: Mus musculus similar to AT rich inte... 42 1.6
30ref|XM_992330.1| PREDICTED: Mus musculus AT rich interactive dom... 42 1.6
31ref|XM_992362.1| PREDICTED: Mus musculus AT rich interactive dom... 42 1.6
32gb|BC052039.1| Mus musculus ARP5 actin-related protein 5 homolog... 42 1.6
33ref|NM_175419.4| Mus musculus ARP5 actin-related protein 5 homol... 42 1.6
34emb|Z29361.1|DMBTDGN D.melanogaster (Canton S) BTD gene 42 1.6
35emb|CR925752.5| Mouse DNA sequence from clone RP24-106O24 on chr... 42 1.6
36gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell ... 42 1.6
37gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, comple... 42 1.6
38ref|NM_078545.2| Drosophila melanogaster buttonhead CG12653-RA (... 42 1.6
39gb|AY084183.1| Drosophila melanogaster RE62247 full insert cDNA 42 1.6
40dbj|AK142980.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 42 1.6
41dbj|AK046312.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.6
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
43gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 42 1.6
44gb|AC011379.7| Homo sapiens chromosome 5 clone CTB-131B5, comple... 42 1.6
45gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 42 1.6
46dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
47gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 42 1.6
48gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, co... 42 1.6
49emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on ch... 42 1.6
50dbj|AP004336.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
51gb|AY548172.1| Mus musculus retinoic acid induced 1 (Rai1) mRNA,... 40 6.3
52gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
53ref|NM_131447.1| Danio rerio pre-B-cell leukemia transcription f... 40 6.3
54gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
55gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, comp... 40 6.3
56gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, comp... 40 6.3
57ref|XM_581038.2| PREDICTED: Bos taurus similar to Afadin (Af-6 p... 40 6.3
58gb|AC008231.4| Drosophila melanogaster clone BACR12O13, complete... 40 6.3
59ref|XM_421601.1| PREDICTED: Gallus gallus similar to Hypothetica... 40 6.3
60ref|NM_005194.2| Homo sapiens CCAAT/enhancer binding protein (C/... 40 6.3
61gb|BC021931.1| Homo sapiens CCAAT/enhancer binding protein (C/EB... 40 6.3
62gb|BC007538.1| Homo sapiens CCAAT/enhancer binding protein (C/EB... 40 6.3
63gb|AC158704.3| Microcebus murinus clone CH257-434D18, complete s... 40 6.3
64gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, comp... 40 6.3
65ref|XM_752581.1| Ustilago maydis 521 hypothetical protein (UM015... 40 6.3
66emb|Y09980.1|HSHOXD3 H.sapiens HOXD3 gene 40 6.3
67emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromo... 40 6.3
68gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complet... 40 6.3
69gb|AC079804.5| Homo sapiens BAC clone RP11-740N7 from 7, complet... 40 6.3
70gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.3
71ref|NM_001037764.1| Mus musculus retinoic acid induced 1 (Rai1),... 40 6.3
72ref|NM_009021.2| Mus musculus retinoic acid induced 1 (Rai1), tr... 40 6.3
73emb|AL160408.24| Human DNA sequence from clone RP4-781K5 on chro... 40 6.3
74emb|AL161937.13| Human DNA sequence from clone RP11-112L6 on chr... 40 6.3
75emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 ... 40 6.3
76emb|BX061361.1|CNS09JID Single read from an extremity of a full-... 40 6.3
77emb|BX048715.1|CNS099R3 Single read from an extremity of a full-... 40 6.3
78ref|XM_781280.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
79emb|AJ131022.1|DME131022 Drosophila melanogaster D-Sp1 gene for ... 40 6.3
80emb|AL669954.6| Mouse DNA sequence from clone RP23-456O18 on chr... 40 6.3
81emb|CR618754.1| full-length cDNA clone CS0DE008YN19 of Placenta ... 40 6.3
82emb|CR611012.1| full-length cDNA clone CS0DI028YM05 of Placenta ... 40 6.3
83emb|CR606949.1| full-length cDNA clone CS0DE003YP24 of Placenta ... 40 6.3
84emb|CR596985.1| full-length cDNA clone CS0DN002YA05 of Adult bra... 40 6.3
85ref|NM_176243.1| Drosophila melanogaster CG18375-RB, transcript ... 40 6.3
86ref|NM_167200.1| Drosophila melanogaster Sp1 CG1343-RB, transcri... 40 6.3
87ref|NM_137721.1| Drosophila melanogaster CG18375-RA, transcript ... 40 6.3
88ref|NM_134516.2| Drosophila melanogaster CG32529-RA, transcript ... 40 6.3
89ref|NM_132351.1| Drosophila melanogaster Sp1 CG1343-RA, transcri... 40 6.3
90ref|NM_132346.1| Drosophila melanogaster CG3003-RB (CG3003), mRNA 40 6.3
91gb|AF289608.1|AF289608 Homo sapiens clone pp9092 unknown mRNA 40 6.3
92dbj|AK154252.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.3
93gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57... 40 6.3
94gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, comple... 40 6.3
95dbj|AK013909.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 40 6.3
96gb|AF325500.1|AF325500 Antheraea yamamai transposon mariner-like... 40 6.3
97gb|BC049785.1| Mus musculus retinoic acid induced 1, mRNA (cDNA ... 40 6.3
98dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
99dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
100gb|U91514.2|DPU91514 Drosophila picticornis pair-rule transcript... 40 6.3
101gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, re... 40 6.3
102gb|AF083334.1|AF083334 Antheraea pernyi fibroin gene, complete cds 40 6.3
103gb|BT003215.1| Drosophila melanogaster RE13301 full insert cDNA 40 6.3
104gb|AY193834.1| Homo sapiens CCAAT/enhancer binding protein (C/EB... 40 6.3
105gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone... 40 6.3
106dbj|AK129449.1| Mus musculus mRNA for mKIAA1820 protein 40 6.3
107gb|AF162696.1|AF162696 Danio rerio Pbx4 homeodomain protein (pbx... 40 6.3
108gb|AF026801.1|HSCOL9A3S1 Homo sapiens alpha-3 type IX collagen (... 40 6.3
109gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 ... 40 6.3
110gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 40 6.3
111gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61... 40 6.3
112gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 ... 40 6.3
113gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 ... 40 6.3
114gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
115emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
116gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 6.3
117emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chr... 40 6.3
118emb|X52560.1|HSNFIL6 Human gene for nuclear factor NF-IL6 40 6.3 
>gb|AY108832.1| Zea mays PCO121636 mRNA sequence
          Length = 1555

 Score =  113 bits (57), Expect = 5e-22
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 392  ggggccgagctcangagctccaggccctgcttgcccatctgctgcacctcctgcngggac 451
            ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| 
Sbjct: 1062 ggggccgagctcaggagctccaggccctgcttccccatctgctgcacctcctgcggggag 1003

                          
Query: 452  agnatctttatgca 465
            || |||||||||||
Sbjct: 1002 aggatctttatgca 989



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 287  tcgaccgagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctcgca 346
            |||||||| || || ||||||||||||||||||||||| |||||||||||||||||  | 
Sbjct: 1155 tcgaccgaaccgacggacgcgatcccggtgctcaggcttctcgactcctgcctgctgacg 1096

                             
Query: 347  tagtcgtcgcagctgct 363
            |||||||| ||||||||
Sbjct: 1095 tagtcgtcacagctgct 1079
to top
>ref|XM_464221.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3236

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 415  gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
            |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 2753 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 2703



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 293  gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
            ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 2860 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 2810
to top
>ref|XM_506725.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1661_C12.26 mRNA
          Length = 3885

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 415  gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
            |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 3375 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 3325



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 293  gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
            ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 3482 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 3432
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                  
Query: 415     gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
               |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 3492393 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 3492343



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 293     gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
               ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 3492500 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 3492450
to top
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0023I17
          Length = 141852

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 415   gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
             |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 37188 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 37138



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 293   gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
             ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 37295 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 37245
to top
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1661_C12
          Length = 122214

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 415    gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
              |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 105216 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 105166



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 293    gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
              ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 105323 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 105273
to top
>dbj|AK070569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056C15, full
            insert sequence
          Length = 3885

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 415  gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
            |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 3375 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 3325



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 293  gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
            ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 3482 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 3432
to top
>dbj|AK066725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074M13, full
            insert sequence
          Length = 3235

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 415  gccctgcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
            |||| |||||||||||||||| ||||||||| | || || |||||||||||
Sbjct: 2752 gcccggcttgcccatctgctgaacctcctgcggcgaaagtatctttatgca 2702



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 293  gagccaaccgacgcgatcccggtgctcaggctcctcgactcctgcctgctc 343
            ||||| ||||||||||| || ||||| ||||| || || ||||||||||||
Sbjct: 2859 gagcccaccgacgcgattccagtgcttaggcttcttgattcctgcctgctc 2809
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 420      gcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
                |||||||||||||||||||||||||  | || || |||||||||||
Sbjct: 27775266 gcttgcccatctgctgcacctcctgtggtgaaagtatctttatgca 27775311



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 314      gtgctcaggctcctcgactcctgcctgctcgcatagtcgtcgcagctgct 363
                ||||||||||| || || |||||||||||| ||||||| || ||||||||
Sbjct: 27775175 gtgctcaggcttcttgattcctgcctgctcacatagtcatcacagctgct 27775224
to top
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1153E06
          Length = 174588

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 420    gcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
              |||||||||||||||||||||||||  | || || |||||||||||
Sbjct: 124521 gcttgcccatctgctgcacctcctgtggtgaaagtatctttatgca 124566



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 314    gtgctcaggctcctcgactcctgcctgctcgcatagtcgtcgcagctgct 363
              ||||||||||| || || |||||||||||| ||||||| || ||||||||
Sbjct: 124430 gtgctcaggcttcttgattcctgcctgctcacatagtcatcacagctgct 124479
to top
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710B08
          Length = 186991

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 420   gcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
             |||||||||||||||||||||||||  | || || |||||||||||
Sbjct: 77775 gcttgcccatctgctgcacctcctgtggtgaaagtatctttatgca 77820



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 314   gtgctcaggctcctcgactcctgcctgctcgcatagtcgtcgcagctgct 363
             ||||||||||| || || |||||||||||| ||||||| || ||||||||
Sbjct: 77684 gtgctcaggcttcttgattcctgcctgctcacatagtcatcacagctgct 77733
to top
>dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L19, full
            insert sequence
          Length = 3731

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 420  gcttgcccatctgctgcacctcctgcngggacagnatctttatgca 465
            |||||||||||||||||||||||||  | || || |||||||||||
Sbjct: 3331 gcttgcccatctgctgcacctcctgtggtgaaagtatctttatgca 3286



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 314  gtgctcaggctcctcgactcctgcctgctcgcatagtcgtcgcagctgct 363
            ||||||||||| || || |||||||||||| ||||||| || ||||||||
Sbjct: 3422 gtgctcaggcttcttgattcctgcctgctcacatagtcatcacagctgct 3373
to top
>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 128    cataacttaaagagctagtaggaatggt 155
              |||||||||||||| |||||||||||||
Sbjct: 784917 cataacttaaagagatagtaggaatggt 784890
to top
>ref|XM_342563.2| PREDICTED: Rattus norvegicus ARP5 actin-related protein 5 homolog
            (yeast) (predicted) (Actr5_predicted), mRNA
          Length = 2169

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 351  cgtcgcagctgctgctgccgccgc 374
            ||||||||||||||||||||||||
Sbjct: 1250 cgtcgcagctgctgctgccgccgc 1227
to top
>ref|XM_479416.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2010

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 350 tcgtcgcagctgctgctgccgccgcc 375
           ||||||| ||||||||||||||||||
Sbjct: 368 tcgtcgctgctgctgctgccgccgcc 343
to top
>emb|AJ223176.1|SGAJ3176 Streptomyces granaticolor pkg4, pkg3 genes and ORF1
          Length = 6992

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 351  cgtcgcagctgctgctgccgcc 372
            ||||||||||||||||||||||
Sbjct: 4950 cgtcgcagctgctgctgccgcc 4971
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 350      tcgtcgcagctgctgctgccgccgcc 375
                ||||||| ||||||||||||||||||
Sbjct: 27830334 tcgtcgctgctgctgctgccgccgcc 27830309



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 356      cagctgctgctgccgccgccncct 379
                |||||||||||||||||||| |||
Sbjct: 13183837 cagctgctgctgccgccgccacct 13183860
to top
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0496C02
          Length = 148419

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 350    tcgtcgcagctgctgctgccgccgcc 375
              ||||||| ||||||||||||||||||
Sbjct: 122713 tcgtcgctgctgctgctgccgccgcc 122688
to top
>gb|M92914.1|DROMASTM Drosophila virilis mastermind gene, complete cds
          Length = 5650

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 355  gcagctgctgctgccgccgccncct 379
            ||||||||||||||||||||| |||
Sbjct: 3572 gcagctgctgctgccgccgccgcct 3548
to top
>gb|M35146.1|HS5E1P Murine cytomegalovirus early transcription unit e1 protein gene,
            complete cds
          Length = 2590

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 354  cgcagctgctgctgccgccgcc 375
            ||||||||||||||||||||||
Sbjct: 1926 cgcagctgctgctgccgccgcc 1947
to top
>gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, complete cds
          Length = 4536

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 354  cgcagctgctgctgccgccgcc 375
            ||||||||||||||||||||||
Sbjct: 3614 cgcagctgctgctgccgccgcc 3635
to top
>ref|XM_470360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 732

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 355 gcagctgctgctgccgccgcc 375
           |||||||||||||||||||||
Sbjct: 436 gcagctgctgctgccgccgcc 456
to top
>ref|NM_188196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 356 cagctgctgctgccgccgccncct 379
           |||||||||||||||||||| |||
Sbjct: 266 cagctgctgctgccgccgccacct 243
to top
>gb|BC084249.1| Xenopus laevis SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily e, member 1, mRNA (cDNA
            clone MGC:81726 IMAGE:6865328), complete cds
          Length = 1775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 355  gcagctgctgctgccgccgcc 375
            |||||||||||||||||||||
Sbjct: 1050 gcagctgctgctgccgccgcc 1070
to top
>gb|AY376492.1| Cercopithecus aethiops mitochondrial DNA polymerase (POLG) gene,
           partial cds
          Length = 84

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 355 gcagctgctgctgccgccgcc 375
           |||||||||||||||||||||
Sbjct: 37  gcagctgctgctgccgccgcc 17
to top
>ref|XM_591114.2| PREDICTED: Bos taurus similar to ARP5 actin-related protein 5
           homolog (LOC540037), mRNA
          Length = 3439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 354 cgcagctgctgctgccgccgc 374
           |||||||||||||||||||||
Sbjct: 932 cgcagctgctgctgccgccgc 912
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 355      gcagctgctgctgccgccgcc 375
                |||||||||||||||||||||
Sbjct: 34939541 gcagctgctgctgccgccgcc 34939521
to top
>ref|XR_001562.1| PREDICTED: Mus musculus similar to p47 protein isoform a (LOC547150),
            misc RNA
          Length = 1557

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 358  gctgctgctgccgccgccncctag 381
            |||||||||||||||||| |||||
Sbjct: 1263 gctgctgctgccgccgcctcctag 1286
to top
>ref|XR_002529.1| PREDICTED: Mus musculus similar to AT rich interactive domain 1A
           isoform a (LOC669477), mRNA
          Length = 7992

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 351 cgtcgcagctgctgctgccgccgcc 375
           |||||| ||||||||||||||||||
Sbjct: 393 cgtcgctgctgctgctgccgccgcc 369
to top
>ref|XM_992330.1| PREDICTED: Mus musculus AT rich interactive domain 1A (Swi1 like),
           transcript variant 2 (Arid1a), mRNA
          Length = 7524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 351 cgtcgcagctgctgctgccgccgcc 375
           |||||| ||||||||||||||||||
Sbjct: 394 cgtcgctgctgctgctgccgccgcc 370
to top
>ref|XM_992362.1| PREDICTED: Mus musculus AT rich interactive domain 1A (Swi1 like),
           transcript variant 3 (Arid1a), mRNA
          Length = 8175

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 351 cgtcgcagctgctgctgccgccgcc 375
           |||||| ||||||||||||||||||
Sbjct: 394 cgtcgctgctgctgctgccgccgcc 370
to top
>gb|BC052039.1| Mus musculus ARP5 actin-related protein 5 homolog (yeast), mRNA (cDNA
            clone MGC:62401 IMAGE:5716274), complete cds
          Length = 2949

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1118 cgcagctgctgctgccgccgc 1098
to top
>ref|NM_175419.4| Mus musculus ARP5 actin-related protein 5 homolog (yeast) (Actr5),
            mRNA
          Length = 2381

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1137 cgcagctgctgctgccgccgc 1117
to top
>emb|Z29361.1|DMBTDGN D.melanogaster (Canton S) BTD gene
          Length = 2642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 354 cgcagctgctgctgccgccgc 374
           |||||||||||||||||||||
Sbjct: 697 cgcagctgctgctgccgccgc 677
to top
>emb|CR925752.5| Mouse DNA sequence from clone RP24-106O24 on chromosome 4, complete
             sequence
          Length = 103739

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 351   cgtcgcagctgctgctgccgccgcc 375
             |||||| ||||||||||||||||||
Sbjct: 31725 cgtcgctgctgctgctgccgccgcc 31749
to top
>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 159970

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   cgcagctgctgctgccgccgc 374
             |||||||||||||||||||||
Sbjct: 98329 cgcagctgctgctgccgccgc 98309



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    cgcagctgctgctgccgccg 373
              ||||||||||||||||||||
Sbjct: 157113 cgcagctgctgctgccgccg 157094



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   cagctgctgctgccgccgcc 375
             ||||||||||||||||||||
Sbjct: 14201 cagctgctgctgccgccgcc 14182
to top
>gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, complete sequence
          Length = 118504

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 351  cgtcgcagctgctgctgccgc 371
            |||||||||||||||||||||
Sbjct: 9886 cgtcgcagctgctgctgccgc 9906
to top
>ref|NM_078545.2| Drosophila melanogaster buttonhead CG12653-RA (btd), mRNA
          Length = 2947

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1134 cgcagctgctgctgccgccgc 1114
to top
>gb|AY084183.1| Drosophila melanogaster RE62247 full insert cDNA
          Length = 2949

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1133 cgcagctgctgctgccgccgc 1113
to top
>dbj|AK142980.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030027F15 product:BA122O1.2 (ARP5
            actin-related protein 5 homolog (Yeast)) homolog [Homo
            sapiens], full insert sequence
          Length = 2361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1139 cgcagctgctgctgccgccgc 1119
to top
>dbj|AK046312.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230368I22 product:similar to
            BA122O1.2 (A NOVEL PROTEIN SIMILAR TO THE YEAST
            ACTIN-LIKE PROTEIN ARP5 (YNL059C, N2430 OR YNL2430C))
            [Homo sapiens], full insert sequence
          Length = 2661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  cgcagctgctgctgccgccgc 374
            |||||||||||||||||||||
Sbjct: 1163 cgcagctgctgctgccgccgc 1143
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 355      gcagctgctgctgccgccgcc 375
                |||||||||||||||||||||
Sbjct: 35029613 gcagctgctgctgccgccgcc 35029593
to top
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   gcagctgctgctgccgccgcc 375
             |||||||||||||||||||||
Sbjct: 75939 gcagctgctgctgccgccgcc 75959
to top
>gb|AC011379.7| Homo sapiens chromosome 5 clone CTB-131B5, complete sequence
          Length = 170797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   cgtcgcagctgctgctgccgc 371
             |||||||||||||||||||||
Sbjct: 93317 cgtcgcagctgctgctgccgc 93337
to top
>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   cgcagctgctgctgccgccgc 374
             |||||||||||||||||||||
Sbjct: 39834 cgcagctgctgctgccgccgc 39814



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   cgcagctgctgctgccgccg 373
             ||||||||||||||||||||
Sbjct: 98618 cgcagctgctgctgccgccg 98599
to top
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0066B06
          Length = 154025

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 356    cagctgctgctgccgccgccncct 379
              |||||||||||||||||||| |||
Sbjct: 102164 cagctgctgctgccgccgccacct 102187
to top
>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
             sequence
          Length = 318665

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   cgcagctgctgctgccgccgc 374
             |||||||||||||||||||||
Sbjct: 66723 cgcagctgctgctgccgccgc 66703



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    cgcagctgctgctgccgccg 373
              ||||||||||||||||||||
Sbjct: 125507 cgcagctgctgctgccgccg 125488
to top
>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence
          Length = 185586

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 358   gctgctgctgccgccgccncctag 381
             |||||||||||||||||| |||||
Sbjct: 10506 gctgctgctgccgccgcctcctag 10483
to top
>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete
              sequence
          Length = 196078

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    cgcagctgctgctgccgccgc 374
              |||||||||||||||||||||
Sbjct: 144935 cgcagctgctgctgccgccgc 144915
to top
>dbj|AP004336.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           PAC clone:P0498D08, complete sequence
          Length = 53801

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 356 cagctgctgctgccgccgccncct 379
           |||||||||||||||||||| |||
Sbjct: 159 cagctgctgctgccgccgccacct 182
to top
>gb|AY548172.1| Mus musculus retinoic acid induced 1 (Rai1) mRNA, complete cds
          Length = 7060

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  cctagcctcttcccaggggc 396
            ||||||||||||||||||||
Sbjct: 6233 cctagcctcttcccaggggc 6214
to top
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01,
             complete sequence
          Length = 151938

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   cagctgctgctgccgccgcc 375
             ||||||||||||||||||||
Sbjct: 63678 cagctgctgctgccgccgcc 63659
to top
>ref|NM_131447.1| Danio rerio pre-B-cell leukemia transcription factor 4 (pbx4), mRNA
          Length = 2854

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 1331 gcagctgctgctgccgccgc 1312
to top
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0052F16, complete sequence
          Length = 162082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  cagctgctgctgccgccgcc 375
            ||||||||||||||||||||
Sbjct: 7674 cagctgctgctgccgccgcc 7655
to top
>gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, complete sequence
          Length = 165330

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   cagctgctgctgccgccgcc 375
             ||||||||||||||||||||
Sbjct: 25001 cagctgctgctgccgccgcc 25020
to top
>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence
          Length = 171792

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   gggggagaaagggaaaaggg 217
             ||||||||||||||||||||
Sbjct: 19162 gggggagaaagggaaaaggg 19181
to top
>ref|XM_581038.2| PREDICTED: Bos taurus similar to Afadin (Af-6 protein) (LOC504856),
            mRNA
          Length = 5241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  cagctgctgctgccgccgcc 375
            ||||||||||||||||||||
Sbjct: 4638 cagctgctgctgccgccgcc 4619
to top
>gb|AC008231.4| Drosophila melanogaster clone BACR12O13, complete sequence
          Length = 177339

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   gcagctgctgctgccgccgc 374
             ||||||||||||||||||||
Sbjct: 72551 gcagctgctgctgccgccgc 72570
to top
>ref|XM_421601.1| PREDICTED: Gallus gallus similar to Hypothetical protein E330020C23
            (LOC423724), mRNA
          Length = 6567

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 4270 gcagctgctgctgccgccgc 4289
to top
>ref|NM_005194.2| Homo sapiens CCAAT/enhancer binding protein (C/EBP), beta (CEBPB),
           mRNA
          Length = 1837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 104 cgtcgctgctgctgctgccgccgc 81
to top
>gb|BC021931.1| Homo sapiens CCAAT/enhancer binding protein (C/EBP), beta, mRNA
           (cDNA clone MGC:32080 IMAGE:4870789), complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 104 cgtcgctgctgctgctgccgccgc 81
to top
>gb|BC007538.1| Homo sapiens CCAAT/enhancer binding protein (C/EBP), beta, mRNA
           (cDNA clone MGC:15409 IMAGE:3028673), complete cds
          Length = 1832

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 89  cgtcgctgctgctgctgccgccgc 66
to top
>gb|AC158704.3| Microcebus murinus clone CH257-434D18, complete sequence
          Length = 257333

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    cataacttaaagagctagta 147
              ||||||||||||||||||||
Sbjct: 108627 cataacttaaagagctagta 108646
to top
>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence
          Length = 187677

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   cagctgctgctgccgccgcc 375
             ||||||||||||||||||||
Sbjct: 65780 cagctgctgctgccgccgcc 65799
to top
>ref|XM_752581.1| Ustilago maydis 521 hypothetical protein (UM01527.1) partial mRNA
          Length = 3111

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 2569 gcagctgctgctgccgccgc 2588
to top
>emb|Y09980.1|HSHOXD3 H.sapiens HOXD3 gene
          Length = 18573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 371  ccgccncctagcctcttcccaggggccgagc 401
            ||||| ||||||||||| |||| ||||||||
Sbjct: 2903 ccgccccctagcctcttgccagaggccgagc 2873
to top
>emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromosome 7, complete
             sequence
          Length = 122162

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   cgcagctgctgctgccgccg 373
             ||||||||||||||||||||
Sbjct: 78907 cgcagctgctgctgccgccg 78926
to top
>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence
          Length = 195372

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   gggggagaaagggaaaaggg 217
             ||||||||||||||||||||
Sbjct: 80641 gggggagaaagggaaaaggg 80622
to top
>gb|AC079804.5| Homo sapiens BAC clone RP11-740N7 from 7, complete sequence
          Length = 184512

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    cagctgctgctgccgccgcc 375
              ||||||||||||||||||||
Sbjct: 135489 cagctgctgctgccgccgcc 135470
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      gcgcatggttttggcaagtt 35
               ||||||||||||||||||||
Sbjct: 3820110 gcgcatggttttggcaagtt 3820091
to top
>ref|NM_001037764.1| Mus musculus retinoic acid induced 1 (Rai1), transcript variant 2,
            mRNA
          Length = 7125

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  cctagcctcttcccaggggc 396
            ||||||||||||||||||||
Sbjct: 6230 cctagcctcttcccaggggc 6211
to top
>ref|NM_009021.2| Mus musculus retinoic acid induced 1 (Rai1), transcript variant 1,
            mRNA
          Length = 7348

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  cctagcctcttcccaggggc 396
            ||||||||||||||||||||
Sbjct: 6453 cctagcctcttcccaggggc 6434
to top
>emb|AL160408.24| Human DNA sequence from clone RP4-781K5 on chromosome 1q42.1-43,
            complete sequence
          Length = 132887

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 351  cgtcgcagctgctgctgccgccgc 374
            |||||| |||||||||||||||||
Sbjct: 5346 cgtcgctgctgctgctgccgccgc 5369
to top
>emb|AL161937.13| Human DNA sequence from clone RP11-112L6 on chromosome 20 Contains the
             CEBPB (CCAAT/enhancer binding protein (C/EBP), beta))
             gene, a putative novel gene, ESTs, STSs, GSSs and two CpG
             islands.n, complete sequence
          Length = 93399

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 351   cgtcgcagctgctgctgccgccgc 374
             |||||| |||||||||||||||||
Sbjct: 35547 cgtcgctgctgctgctgccgccgc 35524
to top
>emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 on chromosome 20q13.2-13.33
             Contains the 3' end of the NTSR1 gene for high affinity
             neurotensin receptor 1, the C20orf20 gene, the OGFR gene
             for opioid growth factor receptor, the COL9A3 gene for
             collagen IX alpha 3, the C20orf143 gene, the TCFL5 gene
             for basic helix-loop-helix transcription factor-like 5,
             the ARF4P2 gene for ADP-ribosylation factor 4 pseudogene
             2, the 3' end of the DATF1 gene for death associated
             transcription factor 1, two novel genes and seven CpG
             islands, complete sequence
          Length = 160241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   gggggagaaagggaaaaggg 217
             ||||||||||||||||||||
Sbjct: 71094 gggggagaaagggaaaaggg 71075
to top
>emb|BX061361.1|CNS09JID Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC42AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 833

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gcagctgctgctgccgccgc 374
           ||||||||||||||||||||
Sbjct: 320 gcagctgctgctgccgccgc 301
to top
>emb|BX048715.1|CNS099R3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC24AB08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 902

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gcagctgctgctgccgccgc 374
           ||||||||||||||||||||
Sbjct: 319 gcagctgctgctgccgccgc 300
to top
>ref|XM_781280.1| PREDICTED: Strongylocentrotus purpuratus similar to Scm-like with
           four MBT domains protein 2 (LOC581269), mRNA
          Length = 5733

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 cagctgctgctgccgccgcc 375
           ||||||||||||||||||||
Sbjct: 422 cagctgctgctgccgccgcc 441
to top
>emb|AJ131022.1|DME131022 Drosophila melanogaster D-Sp1 gene for C2H2 zinc finger transcription
            factor
          Length = 3071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  cgcagctgctgctgccgccg 373
            ||||||||||||||||||||
Sbjct: 1374 cgcagctgctgctgccgccg 1355
to top
>emb|AL669954.6| Mouse DNA sequence from clone RP23-456O18 on chromosome 11 Contains the
             3' end of the Rai1 gene for retinoic acid induced 1, the
             Srebf1 gene for sterol regulatory element binding factor
             1, the 3' end of the gene for the likely ortholog of H.
             sapiens target of myb1-like 2 (chicken) (TOM1L2)
             (A730055F12Rik), a novel gene and two CpG islands,
             complete sequence
          Length = 119279

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   cctagcctcttcccaggggc 396
             ||||||||||||||||||||
Sbjct: 37088 cctagcctcttcccaggggc 37069
to top
>emb|CR618754.1| full-length cDNA clone CS0DE008YN19 of Placenta of Homo sapiens
           (human)
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 104 cgtcgctgctgctgctgccgccgc 81
to top
>emb|CR611012.1| full-length cDNA clone CS0DI028YM05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1791

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 100 cgtcgctgctgctgctgccgccgc 77
to top
>emb|CR606949.1| full-length cDNA clone CS0DE003YP24 of Placenta of Homo sapiens
           (human)
          Length = 1788

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 94  cgtcgctgctgctgctgccgccgc 71
to top
>emb|CR596985.1| full-length cDNA clone CS0DN002YA05 of Adult brain of Homo sapiens
           (human)
          Length = 1809

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 123 cgtcgctgctgctgctgccgccgc 100
to top
>ref|NM_176243.1| Drosophila melanogaster CG18375-RB, transcript variant B (CG18375),
            mRNA
          Length = 4304

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 1108 gcagctgctgctgccgccgc 1127
to top
>ref|NM_167200.1| Drosophila melanogaster Sp1 CG1343-RB, transcript variant B (Sp1),
           mRNA
          Length = 2020

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cgcagctgctgctgccgccg 373
           ||||||||||||||||||||
Sbjct: 856 cgcagctgctgctgccgccg 837
to top
>ref|NM_137721.1| Drosophila melanogaster CG18375-RA, transcript variant A (CG18375),
            mRNA
          Length = 4594

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 1398 gcagctgctgctgccgccgc 1417
to top
>ref|NM_134516.2| Drosophila melanogaster CG32529-RA, transcript variant A (CG32529),
           mRNA
          Length = 9319

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gcagctgctgctgccgccgc 374
           ||||||||||||||||||||
Sbjct: 83  gcagctgctgctgccgccgc 64
to top
>ref|NM_132351.1| Drosophila melanogaster Sp1 CG1343-RA, transcript variant A (Sp1),
           mRNA
          Length = 2076

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cgcagctgctgctgccgccg 373
           ||||||||||||||||||||
Sbjct: 912 cgcagctgctgctgccgccg 893
to top
>ref|NM_132346.1| Drosophila melanogaster CG3003-RB (CG3003), mRNA
          Length = 3503

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  cagctgctgctgccgccgcc 375
            ||||||||||||||||||||
Sbjct: 2166 cagctgctgctgccgccgcc 2147
to top
>gb|AF289608.1|AF289608 Homo sapiens clone pp9092 unknown mRNA
          Length = 1847

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 101 cgtcgctgctgctgctgccgccgc 78
to top
>dbj|AK154252.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630012D23
            product:retinoic acid induced 1, full insert sequence
          Length = 7188

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  cctagcctcttcccaggggc 396
            ||||||||||||||||||||
Sbjct: 6293 cctagcctcttcccaggggc 6274
to top
>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone
              BACR13H23, complete sequence
          Length = 179139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    cagctgctgctgccgccgcc 375
              ||||||||||||||||||||
Sbjct: 127589 cagctgctgctgccgccgcc 127608
to top
>gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, complete sequence
          Length = 180659

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   cagctgctgctgccgccgcc 375
             ||||||||||||||||||||
Sbjct: 23595 cagctgctgctgccgccgcc 23576
to top
>dbj|AK013909.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3100001E17 product:retinoic acid induced
           1, full insert sequence
          Length = 1634

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cctagcctcttcccaggggc 396
           ||||||||||||||||||||
Sbjct: 808 cctagcctcttcccaggggc 789
to top
>gb|AF325500.1|AF325500 Antheraea yamamai transposon mariner-like element transposase gene,
            partial cds; and fibroin gene, complete cds
          Length = 9921

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 9086 gcagctgctgctgccgccgc 9067
to top
>gb|BC049785.1| Mus musculus retinoic acid induced 1, mRNA (cDNA clone
           IMAGE:6511305), partial cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cctagcctcttcccaggggc 396
           ||||||||||||||||||||
Sbjct: 926 cctagcctcttcccaggggc 907
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 356      cagctgctgctgccgccgcc 375
                ||||||||||||||||||||
Sbjct: 16048811 cagctgctgctgccgccgcc 16048792
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 356      cagctgctgctgccgccgcc 375
                ||||||||||||||||||||
Sbjct: 16216321 cagctgctgctgccgccgcc 16216302
to top
>gb|U91514.2|DPU91514 Drosophila picticornis pair-rule transcription factor even-skipped
            (eve) gene, promoter region and complete cds
          Length = 5012

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  cagctgctgctgccgccgcc 375
            ||||||||||||||||||||
Sbjct: 4414 cagctgctgctgccgccgcc 4433
to top
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone
              BACR48P17, complete sequence
          Length = 176195

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    gcagctgctgctgccgccgc 374
              ||||||||||||||||||||
Sbjct: 148855 gcagctgctgctgccgccgc 148836
to top
>gb|AF083334.1|AF083334 Antheraea pernyi fibroin gene, complete cds
          Length = 9282

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 6605 gcagctgctgctgccgccgc 6586
to top
>gb|BT003215.1| Drosophila melanogaster RE13301 full insert cDNA
          Length = 4610

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 1398 gcagctgctgctgccgccgc 1417
to top
>gb|AY193834.1| Homo sapiens CCAAT/enhancer binding protein (C/EBP), beta (CEBPB)
            gene, complete cds
          Length = 5086

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 351  cgtcgcagctgctgctgccgccgc 374
            |||||| |||||||||||||||||
Sbjct: 1111 cgtcgctgctgctgctgccgccgc 1088
to top
>gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone rp23-326m22, complete
             sequence
          Length = 227682

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   cctagcctcttcccaggggc 396
             ||||||||||||||||||||
Sbjct: 95827 cctagcctcttcccaggggc 95846
to top
>dbj|AK129449.1| Mus musculus mRNA for mKIAA1820 protein
          Length = 5703

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  cctagcctcttcccaggggc 396
            ||||||||||||||||||||
Sbjct: 4812 cctagcctcttcccaggggc 4793
to top
>gb|AF162696.1|AF162696 Danio rerio Pbx4 homeodomain protein (pbx4) mRNA, complete cds
          Length = 2854

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  gcagctgctgctgccgccgc 374
            ||||||||||||||||||||
Sbjct: 1331 gcagctgctgctgccgccgc 1312
to top
>gb|AF026801.1|HSCOL9A3S1 Homo sapiens alpha-3 type IX collagen (COL9A3) gene, promoter region,
            and exons 1-26
          Length = 20083

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  gggggagaaagggaaaaggg 217
            ||||||||||||||||||||
Sbjct: 8006 gggggagaaagggaaaaggg 7987
to top
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete
              sequence
          Length = 207432

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    gcagctgctgctgccgccgc 374
              ||||||||||||||||||||
Sbjct: 168994 gcagctgctgctgccgccgc 168975
to top
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
              sequence
          Length = 313634

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    cagctgctgctgccgccgcc 375
              ||||||||||||||||||||
Sbjct: 117424 cagctgctgctgccgccgcc 117443
to top
>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete
              sequence
          Length = 305143

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    gcagctgctgctgccgccgc 374
              ||||||||||||||||||||
Sbjct: 133058 gcagctgctgctgccgccgc 133039
to top
>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete
              sequence
          Length = 288721

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    cagctgctgctgccgccgcc 375
              ||||||||||||||||||||
Sbjct: 271256 cagctgctgctgccgccgcc 271237
to top
>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete
            sequence
          Length = 58663

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  cagctgctgctgccgccgcc 375
            ||||||||||||||||||||
Sbjct: 1685 cagctgctgctgccgccgcc 1704
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 356      cagctgctgctgccgccgcc 375
                ||||||||||||||||||||
Sbjct: 16002044 cagctgctgctgccgccgcc 16002025
to top
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 153350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    cagctgctgctgccgccgcc 375
              ||||||||||||||||||||
Sbjct: 116224 cagctgctgctgccgccgcc 116205
to top
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     cataacttaaagagctagta 147
               ||||||||||||||||||||
Sbjct: 1422079 cataacttaaagagctagta 1422098
to top
>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete
              sequence
          Length = 211363

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    agggggagaaagggaaaagg 216
              ||||||||||||||||||||
Sbjct: 171253 agggggagaaagggaaaagg 171234
to top
>emb|X52560.1|HSNFIL6 Human gene for nuclear factor NF-IL6
          Length = 1910

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 351 cgtcgcagctgctgctgccgccgc 374
           |||||| |||||||||||||||||
Sbjct: 208 cgtcgctgctgctgctgccgccgc 185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,556,848
Number of Sequences: 3902068
Number of extensions: 3556848
Number of successful extensions: 92538
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91846
Number of HSP's gapped (non-prelim): 680
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top