>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 28/50 (56%), Positives = 32/50 (64%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                V GGDAGNRE++IN+LVRRMN
Sbjct: 195 PHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 28/50 (56%), Positives = 32/50 (64%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                V GGDAGNRE++IN+LVRRMN
Sbjct: 193 PHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                V GGDAGNRE++IN+L+RRMN
Sbjct: 193 PHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -2

Query: 274 FKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           FK+AN FLWPF                V GGDAGNRED IN+L+RRMN
Sbjct: 213 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260

>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -2

Query: 274 FKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           FK+AN FLWPF                V GGDAGNRED IN+L+RRMN
Sbjct: 201 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -2

Query: 274 FKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           FK+AN FLWPF                V GGDAGNRED IN+L+RRMN
Sbjct: 201 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -2

Query: 274 FKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           FK+AN FLWPF                V GGDAGNRED IN+L+RRMN
Sbjct: 223 FKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRM 134
           PHFK+A  FLWPF                V GGD GNRED IN L+R+M
Sbjct: 195 PHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243

>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXX-XXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           P+FK+AN FLWPF                 + GGD GNRE++IN LV++MN
Sbjct: 191 PNFKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241

>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/49 (46%), Positives = 28/49 (57%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRM 134
           P+FK A+ FLWPF                V GGD GNRED IN+L+R+M
Sbjct: 203 PNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251

>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXX-XXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           P+FK+A+ FLWPF                 + GGD GNRE++IN L+R+MN
Sbjct: 198 PNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248

>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXX--XXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                  + GG  GNRE++IN+LV+ MN
Sbjct: 192 PHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243

>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXXXXX--XXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                  + GG  GNRE++IN+LV+ MN
Sbjct: 192 PHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243

>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXX--XXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                  + GG  GNRE++IN+LV+ MN
Sbjct: 192 PHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243

>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/49 (46%), Positives = 26/49 (53%)
 Frame = -2

Query: 277 HFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           HFK+ N  LWPF              P + GGDAGNRE  IN L+ RMN
Sbjct: 197 HFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245

>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXX--XXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           PHFK+AN FLWPF                  + GG  GNRE +IN+LV+ MN
Sbjct: 193 PHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244

>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXX-XXXXXXPXVXGGDAGNREDYINQLVRRM 134
           P+FK+A  F+WPF                 + GGDAG R+++IN LVR+M
Sbjct: 201 PNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250

>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXX-XXXXXXPXVXGGDAGNREDYINQLVRRM 134
           P+FK+A  FLWPF                 + GGDAG R+++IN LV++M
Sbjct: 200 PNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249

>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 280 PHFKKANXFLWPFXXXXXXXX--XXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           P FK+A+ FLWPF                  + GG  GNRE+ IN L++  N
Sbjct: 199 PAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250

>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7|
          Length = 239

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -2

Query: 274 FKKANXFLWPFXXXXXXXXXXXXXXPXVX-GGDAGNREDYINQLVRRM 134
           FKK N FL+PF                   GG  GN +D ++ L+ RM
Sbjct: 191 FKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238

>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 277 HFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           HF++ + FL PF                   G  G R + INQL+R++N
Sbjct: 198 HFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246

>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 277 HFKKANXFLWPFXXXXXXXXXXXXXXPXVXGGDAGNREDYINQLVRRMN 131
           HF++ + FL PF                   G  G R + INQL+R++N
Sbjct: 198 HFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,573,731
Number of Sequences: 219361
Number of extensions: 529470
Number of successful extensions: 888
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)