>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.087
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    aaaacaatgtatatagttctct 96
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599

>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 58   ttattgagcttaggggaaaaacaatgtat 86
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415

>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     ttattgagcttaggggaaaaa 78
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    ttattgagcttaggggaaaaa 78
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 58       ttattgagcttaggggaaaaacaatgtat 86
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 58    ttattgagcttaggggaaaaacaatgtat 86
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 58     ttattgagcttaggggaaaaacaatgtat 86
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920

>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 58   ttattgagcttaggggaaaaacaatgtat 86
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413

>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 58   ttattgagcttaggggaaaaacaatgtat 86
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431

>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    gaaaaacaatgtatatagttctct 96
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303

>ref|XM_862241.1| PREDICTED: Canis familiaris similar to Regulating synaptic membrane
            exocytosis protein 1 (Rab3-interacting molecule 1) (RIM
            1), transcript variant 3 (LOC481877), mRNA
          Length = 4755

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   tgcctctacaaagcaagaaa 31
            ||||||||||||||||||||
Sbjct: 1662 tgcctctacaaagcaagaaa 1681

>ref|XM_862234.1| PREDICTED: Canis familiaris similar to Regulating synaptic membrane
            exocytosis protein 1 (Rab3-interacting molecule 1) (RIM
            1), transcript variant 2 (LOC481877), mRNA
          Length = 4938

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   tgcctctacaaagcaagaaa 31
            ||||||||||||||||||||
Sbjct: 1662 tgcctctacaaagcaagaaa 1681

>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    atatagttctcttcttctaatggc 108
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565

>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tgtatatagttctcttcttc 101
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157

>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aaaacaatgtatatagttct 94
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711

>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 85   atatagttctcttcttctaatggc 108
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910

>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tcttctaatggcataaatat 116
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403

>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    atatagttctcttcttctaatggc 108
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607

>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    atatagttctcttcttctaatggc 108
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343

>ref|XM_823724.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.5290)
           partial mRNA
          Length = 888

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 8   ttactgcctctacaaagcaagaa 30
           ||||| |||||||||||||||||
Sbjct: 83  ttactccctctacaaagcaagaa 105

>gb|AC121934.4| Mus musculus BAC clone RP24-207A18 from chromosome 5, complete sequence
          Length = 152037

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    aggggaaaaacaatgtata 87
             |||||||||||||||||||
Sbjct: 16372 aggggaaaaacaatgtata 16390

>gb|AC110552.14| Mus musculus chromosome 17, clone RP23-247L7, complete sequence
          Length = 185205

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     tgagcttaggggaaaaaca 80
              |||||||||||||||||||
Sbjct: 104031 tgagcttaggggaaaaaca 104013

>gb|AC154525.2| Mus musculus BAC clone RP24-68I9 from chromosome 14, complete sequence
          Length = 175953

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    gaaaaacaatgtatatagt 91
             |||||||||||||||||||
Sbjct: 96850 gaaaaacaatgtatatagt 96832

>emb|AL034430.4|HS931K24 Human DNA sequence from clone RP5-931K24 on chromosome 20p12 Contains a
             novel pseudogene, the MKKS gene for McKusick-Kaufman
             syndrome protein, the 5' end of the C20orf94 gene, the 5'
             end of a novel gene and two CpG islands, complete sequence
          Length = 74813

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    aatgtatatagttctcttc 98
             |||||||||||||||||||
Sbjct: 64490 aatgtatatagttctcttc 64472

>emb|BX005370.13| Zebrafish DNA sequence from clone DKEY-21P9 in linkage group 10, complete
              sequence
          Length = 208765

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 69     aggggaaaaacaatgtata 87
              |||||||||||||||||||
Sbjct: 110439 aggggaaaaacaatgtata 110457

>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    acaatgtatatagttctct 96
             |||||||||||||||||||
Sbjct: 10953 acaatgtatatagttctct 10935

>gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence
          Length = 172676

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     ttctaatggcataaatata 117
              |||||||||||||||||||
Sbjct: 106665 ttctaatggcataaatata 106647

>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence
          Length = 185255

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    ttctaatggcataaatata 117
             |||||||||||||||||||
Sbjct: 13696 ttctaatggcataaatata 13678

>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    tatagttctcttcttctaa 104
             |||||||||||||||||||
Sbjct: 91955 tatagttctcttcttctaa 91973

>gb|AC147632.3| Mus musculus BAC clone RP23-326H18 from chromosome 5, complete sequence
          Length = 185519

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    aggggaaaaacaatgtata 87
             |||||||||||||||||||
Sbjct: 68523 aggggaaaaacaatgtata 68505

>gb|AC025756.4| Homo sapiens chromosome 5 clone CTD-2159L10, complete sequence
          Length = 97143

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    ctgcctctacaaagcaaga 29
             |||||||||||||||||||
Sbjct: 76046 ctgcctctacaaagcaaga 76064

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 78       acaatgtatatagttctct 96
                |||||||||||||||||||
Sbjct: 18339817 acaatgtatatagttctct 18339835

>dbj|AB071107.1| Macaca fascicularis testis cDNA clone:QtsA-18224, similar to human
            hypothetical protein MGC33370, NM_173807
          Length = 1948

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 73   gaaaaacaatgtatatagttctc 95
            |||||||| ||||||||||||||
Sbjct: 1171 gaaaaacagtgtatatagttctc 1149

>gb|AC068757.20| Homo sapiens 3 BAC RP11-49A13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158438

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     tatagttctcttcttctaa 104
              |||||||||||||||||||
Sbjct: 131772 tatagttctcttcttctaa 131754

>dbj|AP003558.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693A6, complete
             sequence
          Length = 182976

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 66    cttaggggaaaaacaatgtatatagtt 92
             |||||||||| ||| ||||||||||||
Sbjct: 37125 cttaggggaagaactatgtatatagtt 37151

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 78       acaatgtatatagttctct 96
                |||||||||||||||||||
Sbjct: 18349470 acaatgtatatagttctct 18349488

>emb|AL935281.7| Zebrafish DNA sequence from clone CH211-237G1, complete sequence
          Length = 149939

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    aggggaaaaacaatgtata 87
             |||||||||||||||||||
Sbjct: 49240 aggggaaaaacaatgtata 49258

>dbj|AP004249.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-743I15, complete
              sequences
          Length = 191109

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 66     cttaggggaaaaacaatgtatatagtt 92
              |||||||||| ||| ||||||||||||
Sbjct: 132111 cttaggggaagaactatgtatatagtt 132137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,250,845
Number of Sequences: 3902068
Number of extensions: 1250845
Number of successful extensions: 85423
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85268
Number of HSP's gapped (non-prelim): 155
length of query: 117
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 96
effective length of database: 17,151,101,840
effective search space: 1646505776640
effective search space used: 1646505776640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)