ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103959.1| Zea mays PCO068678 mRNA sequence 232 9e-58
2gb|BT016573.1| Zea mays clone Contig406 mRNA sequence 192 8e-46
3gb|BT023967.1| Zea mays clone EL01N0406A06 mRNA sequence 192 8e-46
4dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
5dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
6gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (R... 92 2e-15
7gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
9gb|BT013897.1| Lycopersicon esculentum clone 132894F, mRNA sequence 58 3e-05
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
12dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
13ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 46 0.11
14gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE,... 44 0.44
15gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone... 44 0.44
16gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosom... 42 1.7
17ref|NM_001003303.1| Canis familiaris parathyroid hormone-like ho... 42 1.7
18emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chr... 42 1.7
19emb|AJ831410.1| Halichoerus grypus partial mRNA for parathyroid ... 42 1.7
20gb|AC104639.3| Homo sapiens 3q BAC RP11-672L16 (Roswell Park Can... 42 1.7
21gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, comp... 42 1.7
22gb|AC026473.7| Homo sapiens chromosome 16 clone RP11-51O6, compl... 42 1.7
23gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, comp... 42 1.7
24gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C2... 42 1.7
25gb|AF327654.1|AF327654 Ovis aries parathyroid hormone-related pe... 42 1.7
26gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2... 42 1.7
27dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.7
28gb|U15593.1|CFU15593 Canis familiaris parathyroid hormone-relate... 42 1.7
29gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, c... 40 6.9
30gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRN... 40 6.9
31ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (C... 40 6.9
32ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (C... 40 6.9
33gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, com... 40 6.9
34gb|AY193782.2| Sus scrofa parathyroid hormone-like hormone mRNA,... 40 6.9
35ref|XM_447914.1| Candida glabrata CBS138, CAGL0J04796g partial mRNA 40 6.9
36ref|XM_797333.1| Trypanosoma cruzi strain CL Brener FtsJ cell di... 40 6.9
37ref|XM_798036.1| Trypanosoma cruzi strain CL Brener FtsJ cell di... 40 6.9
38gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, comple... 40 6.9
39gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complet... 40 6.9
40gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, comp... 40 6.9
41emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chr... 40 6.9
42emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chr... 40 6.9
43emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on ch... 40 6.9
44gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence 40 6.9
45emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chr... 40 6.9
46emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.9
47emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 6.9
48gb|AC090424.18| Homo sapiens 12q BAC RP11-428I12 (Roswell Park C... 40 6.9
49emb|AJ831411.1| Phoca vitulina partial mRNA for parathyroid horm... 40 6.9
50emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 i... 40 6.9
51dbj|AB226447.1| Aspergillus oryzae cDNA, contig sequence: AoEST3309 40 6.9
52dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 6.9
53gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, compl... 40 6.9
54gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complet... 40 6.9
55ref|XM_700817.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.9
56gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome... 40 6.9
57gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6... 40 6.9
58gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 6.9
59ref|NM_213916.1| Sus scrofa parathyroid hormone-like hormone (PT... 40 6.9
60gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C... 40 6.9
61dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.9
62emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chrom... 40 6.9
63dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.9
64gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, comple... 40 6.9
65gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, comp... 40 6.9 
>gb|AY103959.1| Zea mays PCO068678 mRNA sequence
          Length = 1621

 Score =  232 bits (117), Expect = 9e-58
 Identities = 231/269 (85%)
 Strand = Plus / Minus

                                                                        
Query: 235  gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 294
            |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| 
Sbjct: 1357 gcttctgctgcatctcctttcttgcctttcttcttcttcccaccacccttcttctttgat 1298

                                                                        
Query: 295  tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 354
            || || |||||||||||||| ||||| ||||| ||||  || ||||||||||| | ||||
Sbjct: 1297 ttcgtccccaaagcaagccatgcctttatctctgcattgtcttcaatggatttggtgggc 1238

                                                                        
Query: 355  tccaactgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacg 414
            |  |||| |||||| |||||||| || ||||| || || ||||| ||||||| || ||| 
Sbjct: 1237 tttaactcctgtagaggatgtgatgttatcttatctgatccattgggcatcagcagcaca 1178

                                                                        
Query: 415  gtgaatttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgc 474
            ||||| || ||||| ||||||||||||||| |||| ||||| || |||||||| ||||||
Sbjct: 1177 gtgaactttatgtgtgcaacaagatcgcctggcttctcatgaagtacagggtacggctgc 1118

                                         
Query: 475  aacagctcatgattcatgcattctaccaa 503
            || || ||||| ||||||||||| |||||
Sbjct: 1117 aatagttcatggttcatgcattccaccaa 1089



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 105  ccacagctgaatgtaatataacacaatcagatgcagc 141
            ||||| |||||||||||||||||| ||||||||||||
Sbjct: 1486 ccacaactgaatgtaatataacaccatcagatgcagc 1450
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>gb|BT016573.1| Zea mays clone Contig406 mRNA sequence
          Length = 583

 Score =  192 bits (97), Expect = 8e-46
 Identities = 223/265 (84%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 298
           |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |
Sbjct: 344 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 285

                                                                       
Query: 299 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 358
           | |||||||||||||| ||||| ||||| ||||  || |||||||||||||  ||||  |
Sbjct: 284 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 225

                                                                       
Query: 359 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 418
           ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| ||||
Sbjct: 224 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 165

                                                                       
Query: 419 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 478
           | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| |
Sbjct: 164 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 105

                                    
Query: 479 gctcatgattcatgcattctaccaa 503
           ||||||| ||||||||||| |||||
Sbjct: 104 gctcatggttcatgcattccaccaa 80



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 111 ctgaatgtaatataacacaatcagatgcagc 141
           |||||||||||||||||| ||||||||||||
Sbjct: 468 ctgaatgtaatataacaccatcagatgcagc 438
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>gb|BT023967.1| Zea mays clone EL01N0406A06 mRNA sequence
          Length = 1422

 Score =  192 bits (97), Expect = 8e-46
 Identities = 223/265 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 298
            |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |
Sbjct: 1189 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 1130

                                                                        
Query: 299  tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 358
            | |||||||||||||| ||||| ||||| ||||  || |||||||||||||  ||||  |
Sbjct: 1129 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 1070

                                                                        
Query: 359  actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 418
            ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| ||||
Sbjct: 1069 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 1010

                                                                        
Query: 419  atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 478
            | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| |
Sbjct: 1009 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 950

                                     
Query: 479  gctcatgattcatgcattctaccaa 503
            ||||||| ||||||||||| |||||
Sbjct: 949  gctcatggttcatgcattccaccaa 925



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 111  ctgaatgtaatataacacaatcagatgcagc 141
            |||||||||||||||||| ||||||||||||
Sbjct: 1313 ctgaatgtaatataacaccatcagatgcagc 1283
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>dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P14, full
            insert sequence
          Length = 1530

 Score =  103 bits (52), Expect = 5e-19
 Identities = 115/136 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 294
            ||||||||||||||||||||||| |||||||| || ||  ||||||  ||||||||||  
Sbjct: 1282 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1223

                                                                        
Query: 295  tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 354
            ||||| |||||||||||||| ||||||||||| || |  || ||||||||||| | ||||
Sbjct: 1222 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1163

                            
Query: 355  tccaactgctgtagtg 370
            | ||||| ||| ||||
Sbjct: 1162 tgcaactcctgaagtg 1147



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 421  ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 480
            |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| |  
Sbjct: 1096 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1037

                                      
Query: 481  tcatgattcatgcattctaccaaacc 506
            ||||||||||||||||| ||||||||
Sbjct: 1036 tcatgattcatgcattccaccaaacc 1011



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 59/71 (83%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                        
Query: 105  ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 164
            ||||| |||||||| |||||| |  |||||||||||    |||||| |||||||  ||||
Sbjct: 1407 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1351

                       
Query: 165  ggaagcaattc 175
            |||||||||||
Sbjct: 1350 ggaagcaattc 1340
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>dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G08, full
            insert sequence
          Length = 1427

 Score =  103 bits (52), Expect = 5e-19
 Identities = 115/136 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 294
            ||||||||||||||||||||||| |||||||| || ||  ||||||  ||||||||||  
Sbjct: 1284 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1225

                                                                        
Query: 295  tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 354
            ||||| |||||||||||||| ||||||||||| || |  || ||||||||||| | ||||
Sbjct: 1224 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1165

                            
Query: 355  tccaactgctgtagtg 370
            | ||||| ||| ||||
Sbjct: 1164 tgcaactcctgaagtg 1149



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 421  ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 480
            |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| |  
Sbjct: 1098 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1039

                                      
Query: 481  tcatgattcatgcattctaccaaacc 506
            ||||||||||||||||| ||||||||
Sbjct: 1038 tcatgattcatgcattccaccaaacc 1013



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 59/71 (83%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                        
Query: 105  ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 164
            ||||| |||||||| |||||| |  |||||||||||    |||||| |||||||  ||||
Sbjct: 1409 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1353

                       
Query: 165  ggaagcaattc 175
            |||||||||||
Sbjct: 1352 ggaagcaattc 1342
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>gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (Rgbp16) mRNA, complete cds
          Length = 1422

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 294
            ||||||||||||||||||||||| |||||||| || | | ||||||  ||||||||||  
Sbjct: 1229 gcttctgctgcatctcctttcttacctttcttcttttgggcaccacttttcttctttgtt 1170

                                                                        
Query: 295  tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 354
            || || |||||||||||||| ||||||||||| || |  || ||||||||||| | ||||
Sbjct: 1169 ttggtccccaaagcaagccatgccttgatctcagcgtggtcttcaatggatttagtgggc 1110

                  
Query: 355  tccaac 360
            | ||||
Sbjct: 1109 tgcaac 1104



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 421  ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 480
            |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| |  
Sbjct: 1043 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 984

                                      
Query: 481  tcatgattcatgcattctaccaaacc 506
            ||||||||||||||||| ||||||||
Sbjct: 983  tcatgattcatgcattccaccaaacc 958



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 59/71 (83%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                        
Query: 105  ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 164
            ||||| |||||||| |||||| |  |||||||||||    |||||| |||||||  ||||
Sbjct: 1354 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 1298

                       
Query: 165  ggaagcaattc 175
            |||||||||||
Sbjct: 1297 ggaagcaattc 1287
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>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J17, complete sequence
          Length = 141598

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                         
Query: 283   ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 342
             ||||||||||  ||||| |||||||||||||| ||||||||||| || |  || ||||||
Sbjct: 60218 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 60159

                                         
Query: 343   gattttgagggctccaactgctgtagtg 370
             ||||| | ||||| ||||| ||| ||||
Sbjct: 60158 gatttagtgggctgcaactcctgaagtg 60131



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 460   acagggtatggctgcaacagctcatgattcatgcattctaccaaacc 506
             |||||||| |||||||| |  ||||||||||||||||| ||||||||
Sbjct: 59828 acagggtacggctgcaataattcatgattcatgcattccaccaaacc 59782



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 235   gcttctgctgcatctcctttctt 257
             |||||||||||||||||||||||
Sbjct: 60372 gcttctgctgcatctcctttctt 60350



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 59/71 (83%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                         
Query: 105   ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 164
             ||||| |||||||| |||||| |  |||||||||||    |||||| |||||||  ||||
Sbjct: 60497 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 60441

                        
Query: 165   ggaagcaattc 175
             |||||||||||
Sbjct: 60440 ggaagcaattc 60430
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                            
Query: 283      ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 342
                ||||||||||  ||||| |||||||||||||| ||||||||||| || |  || ||||||
Sbjct: 16419781 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 16419722

                                            
Query: 343      gattttgagggctccaactgctgtagtg 370
                ||||| | ||||| ||||| ||| ||||
Sbjct: 16419721 gatttagtgggctgcaactcctgaagtg 16419694



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 460      acagggtatggctgcaacagctcatgattcatgcattctaccaaacc 506
                |||||||| |||||||| |  ||||||||||||||||| ||||||||
Sbjct: 16419391 acagggtacggctgcaataattcatgattcatgcattccaccaaacc 16419345



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 235      gcttctgctgcatctcctttctt 257
                |||||||||||||||||||||||
Sbjct: 16419935 gcttctgctgcatctcctttctt 16419913



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 59/71 (83%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                            
Query: 105      ccacagctgaatgtaatataacacaatcagatgcagcaaaggagcaggtacaaacgtaac 164
                ||||| |||||||| |||||| |  |||||||||||    |||||| |||||||  ||||
Sbjct: 16420060 ccacaactgaatgtgatataatagcatcagatgcagt---ggagcaagtacaaaactaac 16420004

                           
Query: 165      ggaagcaattc 175
                |||||||||||
Sbjct: 16420003 ggaagcaattc 16419993
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>gb|BT013897.1| Lycopersicon esculentum clone 132894F, mRNA sequence
          Length = 1587

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 250  cctttcttgcctttctttttcttgccaccacccttcttctt 290
            |||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 1318 cctttctttcctttctttttcttcccaccacctttcttctt 1278



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 394  ccatttggcatcaacaacacggtgaatttgatgtgggcaacaagatcgccttgcttttca 453
            ||||| ||||| |||| ||| ||||| || ||||| ||||| | ||| ||  | || |||
Sbjct: 1174 ccattaggcattaacagcactgtgaacttaatgtgagcaaccaaatcaccaggtttctca 1115

                                            
Query: 454  tggagaacagggtatggctgcaacagctcatg 485
            || |||||||| ||||||||||| ||||||||
Sbjct: 1114 tgtagaacaggatatggctgcaaaagctcatg 1083
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 247      tctcctttcttgcctttctttttct 271
                |||||||||||||||||||||||||
Sbjct: 18789971 tctcctttcttgcctttctttttct 18789995
to top
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0071O21
          Length = 158410

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 247    tctcctttcttgcctttctttttct 271
              |||||||||||||||||||||||||
Sbjct: 132613 tctcctttcttgcctttctttttct 132637
to top
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0004O05
          Length = 140513

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 247   tctcctttcttgcctttctttttct 271
             |||||||||||||||||||||||||
Sbjct: 35336 tctcctttcttgcctttctttttct 35360
to top
>ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC581850 (LOC581850), mRNA
          Length = 1673

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 253 ttcttgcctttctttttcttgcc 275
           |||||||||||||||||||||||
Sbjct: 719 ttcttgcctttctttttcttgcc 697
to top
>gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE, complete sequence
          Length = 1746

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 251 ctttcttgcctttctttttctt 272
           ||||||||||||||||||||||
Sbjct: 634 ctttcttgcctttctttttctt 613
to top
>gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone-related protein (PTHrP)
           mRNA, complete cds
          Length = 534

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 255 cttgcctttctttttcttgcca 276
           ||||||||||||||||||||||
Sbjct: 387 cttgcctttctttttcttgcca 366
to top
>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete sequence
          Length = 196911

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     ggatcatttccattagacact 83
              |||||||||||||||||||||
Sbjct: 139501 ggatcatttccattagacact 139481
to top
>ref|NM_001003303.1| Canis familiaris parathyroid hormone-like hormone (PTHLH), mRNA
          Length = 1166

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 256 ttgcctttctttttcttgcca 276
           |||||||||||||||||||||
Sbjct: 553 ttgcctttctttttcttgcca 533
to top
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the
             3' end of a novel gene, complete sequence
          Length = 188357

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 252   tttcttgcctttctttttctt 272
             |||||||||||||||||||||
Sbjct: 86946 tttcttgcctttctttttctt 86966
to top
>emb|AJ831410.1| Halichoerus grypus partial mRNA for parathyroid hormone related
           protein (pthlp gene)
          Length = 1099

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 256 ttgcctttctttttcttgcca 276
           |||||||||||||||||||||
Sbjct: 725 ttgcctttctttttcttgcca 705
to top
>gb|AC104639.3| Homo sapiens 3q BAC RP11-672L16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 187942

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    ttccattagacacttcaaaaaaggt 94
             |||||||||||||||||| ||||||
Sbjct: 50825 ttccattagacacttcaagaaaggt 50849
to top
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence
          Length = 191035

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   ctgaatgtaatataacacaat 131
             |||||||||||||||||||||
Sbjct: 87455 ctgaatgtaatataacacaat 87435
to top
>gb|AC026473.7| Homo sapiens chromosome 16 clone RP11-51O6, complete sequence
          Length = 170393

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 70     ttccattagacacttcaaaaaaggt 94
              |||||||||||||||||| ||||||
Sbjct: 121162 ttccattagacacttcaagaaaggt 121138
to top
>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence
          Length = 167799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    ctcctttcttgcctttctttt 268
              |||||||||||||||||||||
Sbjct: 107524 ctcctttcttgcctttctttt 107544
to top
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence
          Length = 112944

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ctgaatgtaatataacacaat 131
            |||||||||||||||||||||
Sbjct: 6299 ctgaatgtaatataacacaat 6319
to top
>gb|AF327654.1|AF327654 Ovis aries parathyroid hormone-related peptide mRNA, partial cds
          Length = 363

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 cttgcctttctttttcttgcc 275
           |||||||||||||||||||||
Sbjct: 357 cttgcctttctttttcttgcc 337
to top
>gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2, complete sequence
          Length = 79931

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 248  ctcctttcttgcctttctttt 268
            |||||||||||||||||||||
Sbjct: 5003 ctcctttcttgcctttctttt 4983
to top
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete
             sequence
          Length = 196606

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   ctttcttgcctttctttttct 271
             |||||||||||||||||||||
Sbjct: 73425 ctttcttgcctttctttttct 73405
to top
>gb|U15593.1|CFU15593 Canis familiaris parathyroid hormone-related protein mRNA, complete
           cds
          Length = 1166

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 256 ttgcctttctttttcttgcca 276
           |||||||||||||||||||||
Sbjct: 553 ttgcctttctttttcttgcca 533
to top
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence
          Length = 168677

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 241   gctgcatctcctttcttgcctttc 264
             |||||||| |||||||||||||||
Sbjct: 57177 gctgcatcccctttcttgcctttc 57154
to top
>gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRNA (cDNA clone
           MGC:83228 IMAGE:6635611), complete cds
          Length = 3638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ttcttgcctttctttttctt 272
           ||||||||||||||||||||
Sbjct: 785 ttcttgcctttctttttctt 766
to top
>ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (CaO19_3031), mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ttcttgcctttctttttctt 272
           ||||||||||||||||||||
Sbjct: 740 ttcttgcctttctttttctt 721
to top
>ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (CaO19_10549), mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ttcttgcctttctttttctt 272
           ||||||||||||||||||||
Sbjct: 740 ttcttgcctttctttttctt 721
to top
>gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, complete sequence
          Length = 208480

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     atcatttccattagacacttcaaa 88
              |||||||||||| |||||||||||
Sbjct: 134968 atcatttccattggacacttcaaa 134991
to top
>gb|AY193782.2| Sus scrofa parathyroid hormone-like hormone mRNA, complete cds
          Length = 1336

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 ttgcctttctttttcttgcc 275
           ||||||||||||||||||||
Sbjct: 705 ttgcctttctttttcttgcc 686
to top
>ref|XM_447914.1| Candida glabrata CBS138, CAGL0J04796g partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  tcttgcctttctttttcttg 273
            ||||||||||||||||||||
Sbjct: 1765 tcttgcctttctttttcttg 1746
to top
>ref|XM_797333.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein
           (Tc00.1047053511619.5) partial mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 ccttcttctttgactttgtgccca 304
           ||||||||||||||||||| ||||
Sbjct: 25  ccttcttctttgactttgtcccca 2
to top
>ref|XM_798036.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein
           (Tc00.1047053507207.19) partial mRNA
          Length = 1953

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 ccttcttctttgactttgtgccca 304
           ||||||||||||||||||| ||||
Sbjct: 25  ccttcttctttgactttgtcccca 2
to top
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence
          Length = 112456

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   tctcctttcttgcctttctt 266
             ||||||||||||||||||||
Sbjct: 23468 tctcctttcttgcctttctt 23449
to top
>gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complete sequence
          Length = 135727

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    ggcttctgctgcatctcctt 253
              ||||||||||||||||||||
Sbjct: 133820 ggcttctgctgcatctcctt 133839
to top
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence
          Length = 168008

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   tctcctttcttgcctttctt 266
             ||||||||||||||||||||
Sbjct: 57285 tctcctttcttgcctttctt 57304
to top
>emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chromosome 6 Contains the
             5' part of a novel gene, complete sequence
          Length = 166869

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tcctttcttgcctttctttt 268
             ||||||||||||||||||||
Sbjct: 98161 tcctttcttgcctttctttt 98142
to top
>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains
             ubiquinol-cytochrome c reductase binding (UQCRB)
             pseudogene, the UAP1 gene for UDP-N-acteylglucosamine
             pyrophosphorylase 1,  the 5' end of the DDR2 gene for
             discoidin domain receptor family member 2 and a CpG
             island, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 249   tcctttcttgcctttctttttctt 272
             ||||||||| ||||||||||||||
Sbjct: 79267 tcctttctttcctttctttttctt 79244
to top
>emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on chromosome 10 Contans the
             5' end of the ADAM12 gene for a disintegrin and
             metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN,
             MLTNA, MCMPMltna), a novel gene, the 3' end of a novel
             gene and a CpG island, complete sequence
          Length = 146287

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 249   tcctttcttgcctttctttttctt 272
             ||||||||| ||||||||||||||
Sbjct: 17395 tcctttctttcctttctttttctt 17372
to top
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence
          Length = 199946

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    ggtgaatttgatgtgggcaa 433
              ||||||||||||||||||||
Sbjct: 167175 ggtgaatttgatgtgggcaa 167194
to top
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2
             Contains the 3' end of a novel gene and the gene for a
             novel actin like protein (LOC81569), complete sequence
          Length = 154028

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   aacacggtgaatttgatgtg 428
             ||||||||||||||||||||
Sbjct: 73796 aacacggtgaatttgatgtg 73777
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    cttgatctccgcatcatcct 337
              ||||||||||||||||||||
Sbjct: 352297 cttgatctccgcatcatcct 352278
to top
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tcttgcctttctttttcttg 273
              ||||||||||||||||||||
Sbjct: 455461 tcttgcctttctttttcttg 455442
to top
>gb|AC090424.18| Homo sapiens 12q BAC RP11-428I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158472

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     gcagaaggatcatttccatt 76
              ||||||||||||||||||||
Sbjct: 112378 gcagaaggatcatttccatt 112359
to top
>emb|AJ831411.1| Phoca vitulina partial mRNA for parathyroid hormone related protein
           (pthlp gene)
          Length = 1366

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 ttgcctttctttttcttgcc 275
           ||||||||||||||||||||
Sbjct: 725 ttgcctttctttttcttgcc 706
to top
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1,
             complete sequence
          Length = 104059

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   ctttcttgcctttctttttcttgc 274
             ||||||| ||||||||||||||||
Sbjct: 98034 ctttctttcctttctttttcttgc 98011
to top
>dbj|AB226447.1| Aspergillus oryzae cDNA, contig sequence: AoEST3309
          Length = 924

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 ctgcggcttctgctgcatct 249
           ||||||||||||||||||||
Sbjct: 72  ctgcggcttctgctgcatct 53
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ctgcggcttctgctgcatct 249
              ||||||||||||||||||||
Sbjct: 833584 ctgcggcttctgctgcatct 833565
to top
>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence
          Length = 162705

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 250   cctttcttgcctttctttttcttg 273
             ||||| ||||||||||||||||||
Sbjct: 45537 cctttgttgcctttctttttcttg 45560
to top
>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence
          Length = 243558

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    tcctttcttgcctttctttttctt 272
              ||||||||| ||||||||||||||
Sbjct: 123300 tcctttctttcctttctttttctt 123277
to top
>ref|XM_700817.1| PREDICTED: Danio rerio hypothetical protein LOC561194 (LOC561194),
           partial mRNA
          Length = 932

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ctttcttgcctttctttttcttgc 274
           ||||||| ||||||||||||||||
Sbjct: 215 ctttctttcctttctttttcttgc 192
to top
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence
          Length = 198179

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    ggtgaatttgatgtgggcaa 433
              ||||||||||||||||||||
Sbjct: 133062 ggtgaatttgatgtgggcaa 133043
to top
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete
             sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   tccaactgctgtagtggatg 374
             ||||||||||||||||||||
Sbjct: 86727 tccaactgctgtagtggatg 86708
to top
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 249    tcctttcttgcctttctttttctt 272
              ||||||||| ||||||||||||||
Sbjct: 700316 tcctttctttcctttctttttctt 700339
to top
>ref|NM_213916.1| Sus scrofa parathyroid hormone-like hormone (PTHLH), mRNA
          Length = 1336

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 ttgcctttctttttcttgcc 275
           ||||||||||||||||||||
Sbjct: 705 ttgcctttctttttcttgcc 686
to top
>gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C5, complete sequence
          Length = 159129

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    tcctttcttgcctttctttttctt 272
              ||||||||| ||||||||||||||
Sbjct: 142931 tcctttctttcctttctttttctt 142908
to top
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    cttgatctccgcatcatcct 337
              ||||||||||||||||||||
Sbjct: 405488 cttgatctccgcatcatcct 405469
to top
>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete
              sequence
          Length = 189991

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    ctttctttttcttgccacca 279
              ||||||||||||||||||||
Sbjct: 163125 ctttctttttcttgccacca 163106
to top
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete
              sequence
          Length = 204955

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    tcctttcttgcctttctttttctt 272
              ||||||||| ||||||||||||||
Sbjct: 152384 tcctttctttcctttctttttctt 152361
to top
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence
          Length = 166760

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   gactttgtgcccaaagcaag 311
             ||||||||||||||||||||
Sbjct: 58146 gactttgtgcccaaagcaag 58127
to top
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence
          Length = 183664

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 225   gggctctgc-ggcttctgctgcatctcctttc 255
             ||||||||| |||||||||||||||| |||||
Sbjct: 81392 gggctctgcaggcttctgctgcatctactttc 81423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,532,286
Number of Sequences: 3902068
Number of extensions: 5532286
Number of successful extensions: 120530
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 120261
Number of HSP's gapped (non-prelim): 265
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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