>AIG1_ARATH (P54120) Protein AIG1|
          Length = 353

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
 Frame = -3

Query: 681 RVVLFDNKTKDXRIQAKQLETLLDVVDSVSANNGGNPFTDQMLTRLKEV---HDREMEVH 511
           R++LFDNKTKD   + KQ+  LL ++D V   N   P+TD+M   +KE    H +E E  
Sbjct: 202 RMILFDNKTKDDEKKTKQVHELLKLIDLVRKQNNNIPYTDEMYHMIKEENERHKKEQEEL 261

Query: 510 DAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLMEEQ 358
           ++ G+SE+Q+  L KE+    +  L  +  M+E+ + I +E  Q +L E++
Sbjct: 262 ESKGHSEEQLAALMKELQIMNERNLKAMAEMMEKNMKIAME-AQEKLFEQR 311

>YJE9_YEAST (P47048) Hypothetical 52.8 kDa protein in MTR4-GYP6 intergenic|
           region
          Length = 450

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
 Frame = -3

Query: 684 NRVVLFDNKTKDXRIQ-------AKQLETLLD---VVDSVSANNGGNPFTDQMLTRLKEV 535
           +R++ F N     R Q       A  ++TL +   V+ S++   G     + +L  +KE 
Sbjct: 294 SRLLKFQNNLAQVRTQIDTSATNAVLIQTLSESNEVIKSINGYIGSTEKVEDLLDEIKEG 353

Query: 534 HDREMEVHDAMG-YSEDQITELKKEIHRTRDE 442
           HDR  EV+D +  Y++ Q  E ++EI R  ++
Sbjct: 354 HDRTEEVNDLLAHYNKGQDEEAEEEIERELEQ 385

>GIMA4_RAT (Q8K3K9) GTPase, IMAP family member 4 (Immunity-associated protein|
           4) (Immunity-associated nucleotide 1 protein)
          Length = 310

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 30/109 (27%), Positives = 48/109 (44%)
 Frame = -3

Query: 684 NRVVLFDNKTKDXRIQAKQLETLLDVVDSVSANNGGNPFTDQMLTRLKEVHDREMEVHDA 505
           NR  LF+NK      Q +Q   LL +V S+   NGG  FT++M    + V  ++      
Sbjct: 184 NRYCLFNNKASGAE-QEEQKRQLLTLVQSMVRENGGKYFTNKMYESAEGVIQKQ------ 236

Query: 504 MGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLMEEQ 358
                   T  KKE +R   E+L    A +  +    ++ L+ +L  E+
Sbjct: 237 --------TWKKKEFYR---EELERERARIRREYEAEIQDLRDELERER 274

>GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)|
          Length = 767

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = -3

Query: 555 LTRLKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQV 376
           L +LKE   +   V  AM  + +++ + ++E      +Q AN+TA+++EK     EK +V
Sbjct: 465 LKKLKEEWSQREIVSVAMAQALEEVRKQREEFQ----QQAANLTAIIDEKEQNLREKTEV 520

Query: 375 QLMEEQ 358
            L +EQ
Sbjct: 521 LLQKEQ 526

>SMC2_XENLA (P50533) Structural maintenance of chromosome 2|
           (Chromosome-associated protein E) (Chromosome assembly
           protein XCAP-E)
          Length = 1203

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 546 LKEVHDREMEVHDAMGYSEDQITELKKEI---HRTRDEQLANITAMVEEKLN 400
           LKE+ D  +++ D M  +E ++ EL KEI    + RD+++      +EE L+
Sbjct: 253 LKEMQDSILKLQDTMAENERKVKELGKEIAELEKMRDQEVGGALRSLEEALS 304

>EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 15 (Protein|
            Eps15) (AF-1p protein)
          Length = 896

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = -3

Query: 576  NPFTDQMLTRLKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNI 397
            +PFT    T  KE          A    ED I   K+E  R  +++LA +    +E L +
Sbjct: 825  DPFTSATTTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLEL 884

Query: 396  TVEKLQVQLME 364
             +   + ++ E
Sbjct: 885  AIALSKSEISE 895

>FDHE_HAEIN (P44452) Protein fdhE homolog|
          Length = 302

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
 Frame = -3

Query: 675 VLFDNKTKDXRIQAKQLETLL-------------DVVDSVSANNGGNPFTDQMLTRLKEV 535
           VLF N     + +AK+L  L              D+V+S  +    NP   Q L +L  +
Sbjct: 23  VLFANPKNLYQRRAKRLRDLAQNHPLSDYLLFAADIVESQLSTLEKNPLPPQQLEQLNTI 82

Query: 534 HDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLMEEQ 358
                +         + +TE+  EI    +EQ+A     +E+  +  +E++  +L+ ++
Sbjct: 83  EPLNAKTFKRNSIWREYLTEILDEIKPKANEQIAATIEFLEKASSAELEEMANKLLAQE 141

>MYSP_SARSC (Q9BMM8) Paramyosin|
          Length = 876

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 546 LKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVE---EKLNITVEKLQV 376
           +KEVH+ +M++ +A    +    +L+   HR  +E+     A +E     L + +E L+V
Sbjct: 212 IKEVHEHKMQLDNANHLKQQLAQQLEDTKHRLEEEERKR--ASLENHAHTLEVELESLKV 269

Query: 375 QLMEE 361
           QL EE
Sbjct: 270 QLDEE 274

>SLYA_SALTI (P61091) Transcriptional regulator slyA|
          Length = 144

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = -3

Query: 495 SEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLME 364
           +E  I E+++ IH+TR E LA I++   E L   V KL+  +ME
Sbjct: 96  AEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLVAKLEHNIME 139

>SLYA_SALCH (P61090) Transcriptional regulator slyA|
          Length = 144

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = -3

Query: 495 SEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLME 364
           +E  I E+++ IH+TR E LA I++   E L   V KL+  +ME
Sbjct: 96  AEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLVAKLEHNIME 139

>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/65 (26%), Positives = 37/65 (56%)
 Frame = -3

Query: 555 LTRLKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQV 376
           LT+ +   +RE E   +  ++E+++  L +E+ +   EQL ++     EK  +  E+L+ 
Sbjct: 731 LTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLV----EKHTLEKEELRK 786

Query: 375 QLMEE 361
           +L+E+
Sbjct: 787 ELLEK 791

>LETM1_RAT (Q5XIN6) Leucine zipper-EF-hand containing transmembrane protein 1,|
           mitochondrial precursor
          Length = 739

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -3

Query: 564 DQMLTRLKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQ 439
           +Q  +  KE  + E+   D   YSED + E+KKE+ +T DE+
Sbjct: 556 EQKKSLTKEKEELELLKEDVQDYSED-LQEIKKELSKTGDEK 596

>SMC_METJA (Q59037) Chromosome partition protein smc homolog|
          Length = 1169

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/59 (28%), Positives = 34/59 (57%)
 Frame = -3

Query: 546 LKEVHDREMEVHDAMGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQL 370
           +K + + EME+ D +  +++++  LKKE++    + L N      EK N  ++KL+ +L
Sbjct: 386 IKHLKESEMEIADEIAKNQNELYRLKKELNDL--DNLINRKNFEIEKNNEMIKKLKEEL 442

>RPN5_YEAST (Q12250) 26S proteasome regulatory subunit RPN5 (Proteasome|
           non-ATPase subunit 5)
          Length = 445

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 19/103 (18%), Positives = 46/103 (44%)
 Frame = -3

Query: 684 NRVVLFDNKTKDXRIQAKQLETLLDVVDSVSANNGGNPFTDQMLTRLKEVHDREMEVHDA 505
           +++++ + KT+     A   E L  +VD +++ N  +   +Q+    K+    ++ +   
Sbjct: 37  DQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYM 96

Query: 504 MGYSEDQITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQV 376
           +    + +   K     TR   +  I  + E K+ + VE+ +V
Sbjct: 97  IQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARV 139

>RCN1_MOUSE (Q05186) Reticulocalbin-1 precursor|
          Length = 325

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -3

Query: 666 DNKTKDXRIQAKQLETLLDVVDSVSANNGGNPFTDQMLTRLKEVHDREMEVHDAMGYSED 487
           D+KT D     +  E L  +VD + ++  G   T+++   +K V  R         Y  D
Sbjct: 62  DSKTFDQLSPDESKERLGKIVDRIDSDGDGLVTTEELKLWIKRVQKR---------YIYD 112

Query: 486 QITELKKEIHRTRDEQLA 433
            + ++ K+  R +DE+++
Sbjct: 113 NVAKVWKDYDRDKDEKIS 130

>VGLY_MOPEI (P19240) Glycoprotein polyprotein [Contains: Glycoprotein G1;|
           Glycoprotein G2]
          Length = 489

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +1

Query: 46  IYSYPTPQAFKFYTSTNIRDDATKVLSVTTRLAQVHPLPINKTSGNFFPGESCLQNSALV 225
           ++S P+P  F      ++    T+   ++ RL  +    ++ + GN  PG  CL  S L+
Sbjct: 230 MFSRPSPMGF-----LSLLSQRTRNFYISRRLLGLFTWTLSDSEGNDMPGGYCLTRSMLI 284

Query: 226 G 228
           G
Sbjct: 285 G 285

>RCN1_HUMAN (Q15293) Reticulocalbin-1 precursor|
          Length = 331

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -3

Query: 666 DNKTKDXRIQAKQLETLLDVVDSVSANNGGNPFTDQMLTRLKEVHDREMEVHDAMGYSED 487
           D+KT D     +  E L  +VD +  +  G   T+++ T +K V  R         Y  D
Sbjct: 68  DSKTFDQLTPDESKERLGKIVDRIDNDGDGFVTTEELKTWIKRVQKR---------YIFD 118

Query: 486 QITELKKEIHRTRDEQLA 433
            + ++ K+  R +D++++
Sbjct: 119 NVAKVWKDYDRDKDDKIS 136

>SLYA_SALTY (P40676) Transcriptional regulator slyA (Salmolysin) (Cytolysin|
           slyA)
          Length = 144

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -3

Query: 483 ITELKKEIHRTRDEQLANITAMVEEKLNITVEKLQVQLME 364
           I E+++ IH+TR E LA I++   E L   + KL+  +ME
Sbjct: 100 IAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEHNIME 139

>NFM_RAT (P12839) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 845

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
 Frame = -3

Query: 624 ETLLDVVDSVSANNGGNPFTDQMLTRLKE------VHDREMEVHDAMGYSEDQITELKKE 463
           E+ LD   S S  NGG+   D  L+R  E      ++DR     + + Y E Q  E++ E
Sbjct: 72  ESSLDFSQSSSLLNGGSG-GDYKLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAE 130

Query: 462 IHRTR-------------DEQLANITAMVEEKLNITVEKLQVQL 370
           IH  R             D+++  + A +E    +  EK QVQL
Sbjct: 131 IHALRQKQASHAQLGDAYDQEIRELRATLE---MVNHEKAQVQL 171

>MRCKA_RAT (O54874) Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)|
           (CDC42-binding protein kinase alpha) (Myotonic dystrophy
           kinase-related CDC42-binding kinase alpha) (Myotonic
           dystrophy protein kinase-like alpha) (MRCK alpha)
          Length = 1732

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
 Frame = -3

Query: 561 QMLTRLKEVHDR-----EMEVHDAMGYSEDQITELKKEIHRTRDEQLA-NITAMV-EEKL 403
           Q +T+LK   ++     E E+    G    +I  LKKE+H +  +QLA N   MV ++KL
Sbjct: 684 QEITKLKTDLEKKSIFYEEEISKREGIHASEIKNLKKELHDSEGQQLALNKEIMVLKDKL 743

Query: 402 NITVEKLQVQLMEEQN 355
             T  + Q +  E +N
Sbjct: 744 EKTRRESQSEREEFEN 759


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,737,239
Number of Sequences: 219361
Number of extensions: 1688746
Number of successful extensions: 6504
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6484
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)