ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags28h03 |
|---|---|
| Clone Library Name | barley_pub |
>VATB1_HORVU (Q40078) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 488 Score = 106 bits (265), Expect(2) = 3e-26 Identities = 51/51 (100%), Positives = 51/51 (100%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH Sbjct: 438 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 488 Score = 31.2 bits (69), Expect(2) = 3e-26 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFLDKFE++ + G+ Sbjct: 426 DLLYLEFLDKFERKFVAQGA 445
>VATB2_HORVU (Q40079) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) Length = 483 Score = 103 bits (256), Expect(2) = 3e-25 Identities = 49/51 (96%), Positives = 49/51 (96%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD FYSRDA H Sbjct: 433 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDATH 483 Score = 31.2 bits (69), Expect(2) = 3e-25 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFLDKFE++ + G+ Sbjct: 421 DLLYLEFLDKFERKFVAQGA 440
>VATB2_GOSHI (Q43433) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) (Fragment) Length = 386 Score = 99.4 bits (246), Expect(2) = 4e-24 Identities = 47/51 (92%), Positives = 49/51 (96%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 RKFV QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD +YSRDAA+ Sbjct: 336 RKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAAN 386 Score = 31.2 bits (69), Expect(2) = 4e-24 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFLDKFE++ + G+ Sbjct: 324 DLLYLEFLDKFERKFVTQGA 343
>VATB_ARATH (P11574) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 486 Score = 97.1 bits (240), Expect(2) = 3e-23 Identities = 46/49 (93%), Positives = 47/49 (95%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 334 RKFV QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLD FYSRD+ Sbjct: 436 RKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDS 484 Score = 30.4 bits (67), Expect(2) = 3e-23 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFLDKFE++ G+ Sbjct: 424 DLLYLEFLDKFERKFVMQGA 443
>VATB1_GOSHI (Q43432) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 488 Score = 92.4 bits (228), Expect(2) = 2e-22 Identities = 44/51 (86%), Positives = 46/51 (90%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 RK V QGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKT D +YSRDA + Sbjct: 438 RKVVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTHDQYYSRDAGN 488 Score = 32.3 bits (72), Expect(2) = 2e-22 Identities = 13/20 (65%), Positives = 18/20 (90%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFLDKFE+++ + G+ Sbjct: 426 DLLYLEFLDKFERKVVTQGA 445
>VATB2_ACEAT (Q38680) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)| (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) Length = 492 Score = 70.5 bits (171), Expect(2) = 2e-15 Identities = 33/47 (70%), Positives = 37/47 (78%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 RKFV QG Y+ R IF SLDLAWTLLR+FP+ELL RI AKTL+ Y R Sbjct: 443 RKFVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489 Score = 30.8 bits (68), Expect(2) = 2e-15 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFLDKFE++ + G Sbjct: 431 DLLYLEFLDKFERKFVNQG 449
>VATB1_ACEAT (Q38681) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)| (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) Length = 492 Score = 70.5 bits (171), Expect(2) = 2e-15 Identities = 33/47 (70%), Positives = 37/47 (78%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 RKFV QG Y+ R IF SLDLAWTLLR+FP+ELL RI AKTL+ Y R Sbjct: 443 RKFVNQGHYEARTIFDSLDLAWTLLRLFPKELLRRITAKTLEKMYER 489 Score = 30.8 bits (68), Expect(2) = 2e-15 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFLDKFE++ + G Sbjct: 431 DLLYLEFLDKFERKFVNQG 449
>VATB_SCHPO (P31411) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 503 Score = 74.3 bits (181), Expect(2) = 1e-14 Identities = 32/51 (62%), Positives = 43/51 (84%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 + F++QGAY+ R IF++LDLAW+LLRIFPRE+L RIP K LD +YSR +A+ Sbjct: 438 KTFISQGAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSRSSAY 488 Score = 24.3 bits (51), Expect(2) = 1e-14 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 D L LEFL KFEK S G+ Sbjct: 426 DRLALEFLGKFEKTFISQGA 445
>VATB2_PONPY (Q5R5V5) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) Length = 511 Score = 69.7 bits (169), Expect(2) = 2e-14 Identities = 29/50 (58%), Positives = 38/50 (76%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 R F+AQG Y+ R +F++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 460 RNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 Score = 28.1 bits (61), Expect(2) = 2e-14 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFE+ + G Sbjct: 448 DLLYLEFLQKFERNFIAQG 466
>VATB2_HUMAN (P21281) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) (HO57) Length = 511 Score = 69.7 bits (169), Expect(2) = 2e-14 Identities = 29/50 (58%), Positives = 38/50 (76%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 R F+AQG Y+ R +F++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 460 RNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 Score = 28.1 bits (61), Expect(2) = 2e-14 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFE+ + G Sbjct: 448 DLLYLEFLQKFERNFIAQG 466
>VATB2_BOVIN (P31408) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 68.6 bits (166), Expect(2) = 4e-14 Identities = 28/50 (56%), Positives = 38/50 (76%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 R F+AQG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 460 RNFIAQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 Score = 28.1 bits (61), Expect(2) = 4e-14 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFE+ + G Sbjct: 448 DLLYLEFLQKFERNFIAQG 466
>VATB_NEUCR (P11593) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 513 Score = 71.6 bits (174), Expect(2) = 5e-14 Identities = 31/50 (62%), Positives = 42/50 (84%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 R F+AQG Y++R IF+SLDLAW+LLRI+ +++L+RIP K +D FYSR AA Sbjct: 435 RSFIAQGPYESRTIFESLDLAWSLLRIYRKDMLNRIPKKIIDEFYSRSAA 484 Score = 24.6 bits (52), Expect(2) = 5e-14 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D L LEFLDKFE+ + G Sbjct: 423 DKLSLEFLDKFERSFIAQG 441
>VATB1_BOVIN (P31407) Vacuolar ATP synthase subunit B, kidney isoform (EC| 3.6.3.14) (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 65.9 bits (159), Expect(2) = 9e-14 Identities = 27/50 (54%), Positives = 38/50 (76%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 +KF+ QG Y+ R++F+SLDL W LLR FP+E+L RIP +D F+SR+ A Sbjct: 454 KKFINQGPYEKRSVFESLDLGWKLLRTFPKEMLKRIPQNIIDEFFSREGA 503 Score = 29.6 bits (65), Expect(2) = 9e-14 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK+ + G Sbjct: 442 DLLYLEFLQKFEKKFINQG 460
>VATB1_HUMAN (P15313) Vacuolar ATP synthase subunit B, kidney isoform (EC| 3.6.3.14) (V-ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit) Length = 513 Score = 65.9 bits (159), Expect(2) = 1e-13 Identities = 27/48 (56%), Positives = 38/48 (79%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRD 337 + F+ QG Y+ R++F+SLDL+W LLRIFP+E+L RIP +D FYSR+ Sbjct: 454 KNFINQGPYENRSMFESLDLSWKLLRIFPKEMLKRIPQAVIDEFYSRE 501 Score = 29.3 bits (64), Expect(2) = 1e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK + G Sbjct: 442 DLLYLEFLQKFEKNFINQG 460
>VATB_CANTR (P22550) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 511 Score = 69.3 bits (168), Expect(2) = 1e-13 Identities = 29/48 (60%), Positives = 40/48 (83%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRD 337 + F++QGAY+ R IF+SLDLAW+LLRI+P+E+L+RI K L+ FY RD Sbjct: 441 KNFISQGAYENRTIFESLDLAWSLLRIYPKEMLNRISPKILEEFYGRD 488 Score = 25.8 bits (55), Expect(2) = 1e-13 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 D L LEFL+KFEK S G+ Sbjct: 429 DKLSLEFLEKFEKNFISQGA 448
>VATB2_RAT (P62815) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 65.9 bits (159), Expect(2) = 1e-13 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 + F+ QG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 460 KNFITQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 Score = 29.3 bits (64), Expect(2) = 1e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK + G Sbjct: 448 DLLYLEFLQKFEKNFITQG 466
>VATB2_MOUSE (P62814) Vacuolar ATP synthase subunit B, brain isoform (EC| 3.6.3.14) (V-ATPase B2 subunit) (Vacuolar proton pump B isoform 2) (Endomembrane proton pump 58 kDa subunit) Length = 511 Score = 65.9 bits (159), Expect(2) = 1e-13 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 + F+ QG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+A Sbjct: 460 KNFITQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA 509 Score = 29.3 bits (64), Expect(2) = 1e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK + G Sbjct: 448 DLLYLEFLQKFEKNFITQG 466
>VATB_CHICK (P49712) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 453 Score = 64.7 bits (156), Expect(2) = 3e-13 Identities = 26/49 (53%), Positives = 37/49 (75%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 334 + F+AQG Y+ R ++++LD+ W LLRIFP+E+L RIP TL FY RD+ Sbjct: 401 KNFIAQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQTTLAEFYPRDS 449 Score = 29.3 bits (64), Expect(2) = 3e-13 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK + G Sbjct: 389 DLLYLEFLQKFEKNFIAQG 407
>VATB_CYACA (P48413) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 500 Score = 62.8 bits (151), Expect(2) = 2e-12 Identities = 28/47 (59%), Positives = 36/47 (76%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 R+FV QGAY+ R+I+ SLD+AW LLRIFP ++L RIP K L +Y R Sbjct: 438 RRFVNQGAYERRDIYTSLDMAWDLLRIFPVQMLRRIPEKILQEYYHR 484 Score = 28.1 bits (61), Expect(2) = 2e-12 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEF DKFE+ + G+ Sbjct: 426 DLLYLEFHDKFERRFVNQGA 445
>VATB_HELVI (P31410) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 70.1 bits (170), Expect = 3e-12 Identities = 29/55 (52%), Positives = 39/55 (70%) Frame = -1 Query: 492 TNLRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 T + F++QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 440 TKFEKNFISQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 494 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFL KFEK S G+ Sbjct: 432 DLLYLEFLTKFEKNFISQGN 451
>VATB_DROME (P31409) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 490 Score = 70.1 bits (170), Expect = 3e-12 Identities = 29/55 (52%), Positives = 39/55 (70%) Frame = -1 Query: 492 TNLRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 T + F++QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 436 TKFEKNFISQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 490 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFL KFEK S G+ Sbjct: 428 DLLYLEFLTKFEKNFISQGN 447
>VATB_MANSE (P31401) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 69.7 bits (169), Expect = 5e-12 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = -1 Query: 492 TNLRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 T + F+ QG Y+ R +F+SLD+ W LLRIFP+E+L RIPA L FY RD+ H Sbjct: 440 TKFEKNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDSRH 494 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 DLLYLEFL KFEK + G+ Sbjct: 432 DLLYLEFLTKFEKNFITQGN 451
>VATB_YEAST (P16140) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) Length = 517 Score = 64.7 bits (156), Expect(2) = 8e-12 Identities = 27/47 (57%), Positives = 37/47 (78%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 + F+ QGAY+ R +F+SLD AW+LLRI+P+E+L+RI K LD FY R Sbjct: 441 KTFITQGAYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDR 487 Score = 24.3 bits (51), Expect(2) = 8e-12 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTGS 458 D L LEFL+KFEK + G+ Sbjct: 429 DKLSLEFLEKFEKTFITQGA 448
>VATB_CAEEL (Q19626) Probable vacuolar ATP synthase subunit B (EC 3.6.3.14)| (V-ATPase B subunit) (Vacuolar proton pump B subunit) Length = 491 Score = 67.8 bits (164), Expect = 2e-11 Identities = 28/54 (51%), Positives = 38/54 (70%) Frame = -1 Query: 492 TNLRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 T + F+ QG Y+ R++F+SLD+ W LLRIFPRE+L RIP TL+ +Y R A Sbjct: 436 TKFEKNFITQGHYENRSVFESLDIGWQLLRIFPREMLKRIPESTLEKYYPRGGA 489 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLLYLEFL KFEK + G Sbjct: 428 DLLYLEFLTKFEKNFITQG 446
>VATB_TRYCO (Q26976) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 485 Score = 59.7 bits (143), Expect(2) = 2e-11 Identities = 25/45 (55%), Positives = 36/45 (80%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 +KF+ QG +++R++FQSLDL W LLRIFP+ LL++I KT + FY Sbjct: 434 KKFICQGFHESRDVFQSLDLCWQLLRIFPKVLLNKIDVKTRNEFY 478 Score = 27.7 bits (60), Expect(2) = 2e-11 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 DLL+LEFL+KFEK+ G Sbjct: 422 DLLHLEFLEKFEKKFICQG 440
>VATB_PLAFA (Q25691) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B| subunit) (Vacuolar proton pump B subunit) Length = 494 Score = 55.8 bits (133), Expect(2) = 8e-11 Identities = 23/51 (45%), Positives = 35/51 (68%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAAH 328 ++F+ Q Y+ R+I+QSLD+AW LLRIFP ++L +I L +Y R A+ Sbjct: 444 KRFITQNTYECRDIYQSLDIAWELLRIFPEDMLKKIKTDILSKYYPRHHAN 494 Score = 29.6 bits (65), Expect(2) = 8e-11 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = -3 Query: 517 DLLYLEFLDKFEK 479 D+LYLEFLDKFEK Sbjct: 432 DILYLEFLDKFEK 444
>VATB_PYRHO (O57729) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 42.7 bits (99), Expect(2) = 2e-05 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 R+FVAQG Y+ R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 413 REFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459 Score = 24.6 bits (52), Expect(2) = 2e-05 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D YLEF D+FE+E + G Sbjct: 401 DKKYLEFADRFEREFVAQG 419
>VATB_PYRAB (Q9UXU8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 42.7 bits (99), Expect(2) = 2e-05 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 R+FVAQG Y+ R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 413 REFVAQGYYEDRSIEETLDLGWELLSILPESELKRVKKEMIMKYHPK 459 Score = 24.6 bits (52), Expect(2) = 2e-05 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D YLEF D+FE+E + G Sbjct: 401 DKKYLEFADRFEREFVAQG 419
>VATB_PYRFU (Q8U4A5) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 462 Score = 38.5 bits (88), Expect(2) = 3e-04 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 R+FVAQG + R+I ++LDL W LL I P L R+ + + ++ + Sbjct: 410 REFVAQGYDEDRSIEETLDLGWELLAILPETELKRVKKEMIMKYHPK 456 Score = 24.6 bits (52), Expect(2) = 3e-04 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D YLEF D+FE+E + G Sbjct: 398 DKKYLEFADRFEREFVAQG 416
>VATB_HALSA (Q9HNE4) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 40.0 bits (92), Expect(2) = 7e-04 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDAA 331 +F+ QG R+I ++LDL W LL +FP+ L+R+ ++ Y D A Sbjct: 417 EFIDQGFKTNRDIEETLDLGWELLSMFPKTELNRVDEDLIEDHYVEDVA 465 Score = 21.6 bits (44), Expect(2) = 7e-04 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D YL+F D+FE E G Sbjct: 404 DNRYLDFADRFEAEFIDQG 422
>VATB_STRP8 (Q8P2U5) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 498 SWTN-LRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 ++TN +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 405 AFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP6 (Q5XE49) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 498 SWTN-LRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 ++TN +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 405 AFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP3 (Q7CFI7) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 498 SWTN-LRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 ++TN +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 405 AFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB_STRP1 (Q9A1Q2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 471 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 498 SWTN-LRRKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 ++TN +++ QG Y R+I +SLDL W LL I PR L RI LD + Sbjct: 405 AFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
>VATB2_TREPA (O83540) V-type ATP synthase beta chain 2 (EC 3.6.3.14) (V-type| ATPase subunit B 2) Length = 480 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/42 (40%), Positives = 28/42 (66%) Frame = -1 Query: 474 FVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 F+ Q ++ R+I Q+LD+ W+LL + PR L+RI K +D + Sbjct: 413 FLTQDEHEDRSISQTLDIGWSLLSLLPRTELYRIDPKLIDQY 454
>VATB_ARCFU (O29100) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 470 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 R+FV QG Y+ R+I +LDL W LL + P L ++ K ++ ++ + Sbjct: 408 RRFVQQGRYEDRDIEYTLDLGWELLAMLPERELTKVERKFIEKYHPK 454
>VATB_METJA (Q57669) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 40.4 bits (93), Expect = 0.003 Identities = 18/46 (39%), Positives = 29/46 (63%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 KFV QG + R+I ++LDL W LL I P E L R+ + ++ ++ + Sbjct: 416 KFVRQGKDEDRSIEETLDLLWELLAILPEEELKRVDRELIEKYHPK 461
>NTPB_ENTHR (Q08637) V-type sodium ATP synthase subunit B (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit B) Length = 458 Score = 39.3 bits (90), Expect = 0.007 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAF 349 ++V QG Y R I ++LDL W LL + PR L RI LD + Sbjct: 411 EYVNQGFYTNRTITETLDLGWELLAMLPRTELKRIKDDLLDKY 453
>VATB_PYRKO (Q5JIR2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 465 Score = 35.8 bits (81), Expect(2) = 0.010 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 373 R+FVAQ + R+IF++LDL W LL P L R+ Sbjct: 413 REFVAQRYDEDRSIFETLDLGWELLAELPESELKRV 448 Score = 21.9 bits (45), Expect(2) = 0.010 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 Query: 517 DLLYLEFLDKFEKE 476 D YL+F D+FE+E Sbjct: 401 DRKYLKFADRFERE 414
>VATB_THESI (O32467) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 35.8 bits (81), Expect(2) = 0.010 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 373 R+FVAQ + R+IF++LDL W LL P L R+ Sbjct: 411 REFVAQRYDEDRSIFETLDLGWELLAELPESELKRV 446 Score = 21.9 bits (45), Expect(2) = 0.010 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 Query: 517 DLLYLEFLDKFEKE 476 D YL+F D+FE+E Sbjct: 399 DRKYLKFADRFERE 412
>VATB_DESSY (O06505) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 35.4 bits (80), Expect(2) = 0.012 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 373 R+F+AQ + R+IF++LDL W LL P L R+ Sbjct: 411 REFIAQRYDEDRSIFETLDLGWELLAELPESELKRV 446 Score = 21.9 bits (45), Expect(2) = 0.012 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 Query: 517 DLLYLEFLDKFEKE 476 D YL+F D+FE+E Sbjct: 399 DRKYLKFADRFERE 412
>VATB_HALVO (Q48333) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 468 Score = 38.1 bits (87), Expect = 0.015 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSRDA 334 +FV QG R+I +LD+ W LL P+ L+RI + ++ +Y DA Sbjct: 414 EFVNQGFDTDRSIEDTLDIGWDLLSTLPKSELNRIDEELIEDYYEDDA 461
>VATB_AERPE (Q9YF36) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 466 Score = 38.1 bits (87), Expect = 0.015 Identities = 15/47 (31%), Positives = 30/47 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 ++F+ QG + R+I ++LD+AW +L + P E L I +T+ ++ + Sbjct: 416 QRFLKQGERENRSIEETLDIAWEILSVLPEEELVNIKEETIKKYHPK 462
>VATB_METKA (Q8TUT0) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type ATPase| subunit B) [Contains: Mka atpB intein] Length = 990 Score = 38.1 bits (87), Expect = 0.015 Identities = 16/47 (34%), Positives = 29/47 (61%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 ++FV QG + R+I ++LDL W LL I P L R+ + ++ ++ + Sbjct: 934 QRFVKQGRDENRSIEETLDLGWELLAILPERELKRVSDELIEKYHPK 980
>VATB_PYRAE (Q8ZXR2) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 467 Score = 36.6 bits (83), Expect = 0.042 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFYSR 340 ++F+ QG Y+ R+ ++LD+ W +L I P + L + FY R Sbjct: 413 QRFIKQGYYERRSFEETLDIGWDVLSILPEDELTNARPQITQKFYRR 459
>VATB_METBA (P22663) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 33.9 bits (76), Expect(2) = 0.057 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 ++FV QG + R I +LD+ W +L P L RI K + ++ Sbjct: 409 QQFVTQGRNENRTIADTLDIGWKILAHLPENQLGRIDNKYIQKYH 453 Score = 21.2 bits (43), Expect(2) = 0.057 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 517 DLLYLEFLDKFEKEIRSTG 461 D+ +LEF D FE++ + G Sbjct: 397 DVKFLEFADLFEQQFVTQG 415
>VATB_SULSO (Q9UWW8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 35.8 bits (81), Expect = 0.072 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 RKFV+QG + R+I +LD+ W +L + P L I + + ++ Sbjct: 412 RKFVSQGFNENRSIETTLDIGWEILSVLPESELTNIKTQYIQKYH 456
>VATB_SULTO (Q971B6) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) (Sul-ATPase beta chain) Length = 465 Score = 35.8 bits (81), Expect = 0.072 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 R+FVAQG + R+I +LD+ W +L I P L I ++ + ++ Sbjct: 414 RRFVAQGVNENRSIETTLDIGWEVLSILPESELSLIRSEYIKKYH 458
>VATB_METMA (Q60187) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 32.7 bits (73), Expect = 0.61 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 KFV QG + R I +L++ W +L P L RI K + ++ Sbjct: 410 KFVRQGRNENRTIEDTLEIGWQILTHLPENQLGRIDNKYIQKYH 453
>VATB_METAC (Q8TIJ0) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 460 Score = 32.7 bits (73), Expect = 0.61 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 477 KFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 KFV QG + R I +L++ W +L P L RI K + ++ Sbjct: 410 KFVRQGRNENRTIEDTLEIGWQILTHLPENQLGRIDNKYIQKYH 453
>VATB_METTH (O27035) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 463 Score = 32.7 bits (73), Expect = 0.61 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRI 373 ++F+ Q + R+I ++L+L W LL + PR L R+ Sbjct: 415 KRFITQARDEDRSIEETLNLGWELLSLLPRSELKRV 450
>VATB_SULAC (Q4J8L8) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 466 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -1 Query: 480 RKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAFY 346 RKF+ QG + R+I +LD+ W ++ + P + I + + ++ Sbjct: 415 RKFINQGINENRDIETTLDIGWEVISMLPESEISLIRTEYIKKYH 459
>RUMA_BURPS (Q63UT8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 135 NITSCIVEPKHLSSFLVPLPRTVSK 61 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>RUMA_BURP1 (Q3JRP8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 135 NITSCIVEPKHLSSFLVPLPRTVSK 61 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>RUMA_BURMA (Q62JV9) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 135 NITSCIVEPKHLSSFLVPLPRTVSK 61 ++TSC V P H+S+ LVPL R V + Sbjct: 177 DMTSCEVLPPHVSAMLVPLRRLVEQ 201
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 28.9 bits (63), Expect = 8.9 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%) Frame = +3 Query: 174 KSTNNLCSLT-----RKEWDLTIIITTAKRPEV*TAQFIQAALEKTLDL 305 K+T L +LT +++ +L +T K+ E+ T + + A LEKT+DL Sbjct: 90 KTTKGLKALTEVWAKQQDKELGRKLTVTKKEEIKTVESLDAVLEKTVDL 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,286,180 Number of Sequences: 219361 Number of extensions: 1368260 Number of successful extensions: 3570 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 3443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3569 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
