| Clone Name | rbags28g09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009641.1| Triticum aestivum clone wre1n.pk191.c6:fis, full insert mRNA sequence Length = 1222 Score = 270 bits (136), Expect = 2e-69 Identities = 191/208 (91%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 35 aagcagaagcagtgcttcacaagaccagtgtttgacacctgacaagaggggtttaattat 94 ||||||||| ||||||||||||||||||| || || |||| ||||||| |||||||||| Sbjct: 1082 aagcagaagtagtgcttcacaagaccagtacttaacgcctggcaagaggcgtttaattat 1023 Query: 95 gcatagttccatagccactatccatcacaaccatcagtcagtggtgcaaa-ctaaatggc 153 ||||| |||| || |||||||||| |||||||||||||| ||| ||||| ||||||||| Sbjct: 1022 gcataactccagagtcactatccattacaaccatcagtcaatggggcaaaactaaatggc 963 Query: 154 agctggaataacagaggtaaaaatgcctgtcctggaagcaaaagatatgcttcaggacaa 213 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 962 agctggaataacagaggtaaagatgcctgccctggaagcaaaagatatgcttcaggacaa 903 Query: 214 gcacaaatcacaagaaatccgcttcttg 241 |||||||||||||||||||||||||||| Sbjct: 902 gcacaaatcacaagaaatccgcttcttg 875
>ref|XM_369364.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06100.4) partial mRNA Length = 4707 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcacaagaccagtgtttgac 70 |||||||||||||||||||| Sbjct: 2252 tcacaagaccagtgtttgac 2271
>gb|AC122492.3| Mus musculus BAC clone RP24-390N7 from chromosome 5, complete sequence Length = 196275 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 attatgcatagttccatagccact 113 |||||||||| ||||||||||||| Sbjct: 104127 attatgcataattccatagccact 104150
>gb|AC160414.4| Mus musculus 10 BAC RP24-166O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150002 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aagcacaaatcacaagaaat 231 |||||||||||||||||||| Sbjct: 49248 aagcacaaatcacaagaaat 49267
>gb|AC162308.2| Mus musculus BAC clone RP23-109E9 from chromosome 5, complete sequence Length = 218501 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 attatgcatagttccatagccact 113 |||||||||| ||||||||||||| Sbjct: 19180 attatgcataattccatagccact 19203
>emb|AL844891.7| Mouse DNA sequence from clone RP23-350N21 on chromosome 2, complete sequence Length = 138602 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tcctggaagcaaaagatatg 202 |||||||||||||||||||| Sbjct: 86046 tcctggaagcaaaagatatg 86065 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,689,907 Number of Sequences: 3902068 Number of extensions: 2689907 Number of successful extensions: 49104 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49095 Number of HSP's gapped (non-prelim): 8 length of query: 244 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 222 effective length of database: 17,147,199,772 effective search space: 3806678349384 effective search space used: 3806678349384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)