ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104065.1| Zea mays PCO076650 mRNA sequence 333 3e-88
2gb|AY523572.1| Zea mays brassinosteroid biosynthesis-like protei... 329 5e-87
3gb|BT019154.1| Zea mays clone Contig817.F mRNA sequence 238 1e-59
4ref|NM_196346.1| Oryza sativa (japonica cultivar-group) putative... 216 5e-53
5gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar N... 216 5e-53
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
7dbj|AK111949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 216 5e-53
9gb|AF513859.1| Gossypium hirsutum ovule/fiber cell elongation pr... 72 2e-09
10gb|DQ122178.1| Gossypium hirsutum brassinosteroid biosynthetic p... 72 2e-09
11ref|XM_363816.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.44
12ref|XM_968674.1| PREDICTED: Tribolium castaneum similar to CG180... 44 0.44
13gb|DQ396552.1| Morus alba diminuto (DWF1) mRNA, partial cds 44 0.44
14ref|NM_180285.1| Arabidopsis thaliana DWF1 (DIMINUTO 1); catalyt... 42 1.7
15ref|NM_112872.2| Arabidopsis thaliana DWF1 (DIMINUTO 1); catalyt... 42 1.7
16gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.7
17gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
18gb|BT000367.1| Arabidopsis thaliana unknown protein mRNA, comple... 42 1.7
19gb|AY096472.1| Arabidopsis thaliana putative cell elongation pro... 42 1.7
20gb|AY072216.1| Arabidopsis thaliana putative cell elongation pro... 42 1.7
21gb|AY081286.1| Arabidopsis thaliana unknown protein mRNA, comple... 42 1.7
22gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.7
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
24dbj|AB025631.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.7
25dbj|AK102797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
26gb|AY105978.1| Zea mays PCO082600 mRNA sequence 42 1.7
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
28gb|U12400.1|ATU12400 Arabidopsis thaliana Columbia Dwarf1 (DWF1)... 42 1.7
29gb|AY426060.1| Aclerda sp. PJG-2003 18S small subunit ribosomal ... 40 6.9
30gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 6.9
31emb|AL139035.27| Human DNA sequence from clone RP11-214F16 on ch... 40 6.9
32ref|XM_971262.1| PREDICTED: Tribolium castaneum hypothetical pro... 40 6.9
33emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.9
34emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4,... 40 6.9
35gb|AC009381.10| Drosophila melanogaster 3L BAC RP98-13N10 (Roswe... 40 6.9
36gb|AE012036.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.9
37ref|NM_140897.2| Drosophila melanogaster CG8103-RA, transcript v... 40 6.9
38ref|NM_001014591.1| Drosophila melanogaster CG8103-RB, transcrip... 40 6.9
39gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.9
40gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.9
41gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.9
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
43ref|XM_394394.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.9
44gb|AC073088.5| Homo sapiens BAC clone RP11-323P8 from 2, complet... 40 6.9
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.9
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.9
47emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on ch... 40 6.9
48gb|AF119716.1|AF119716 Drosophila melanogaster dMi-2 protein (dM... 40 6.9
49gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70... 40 6.9
50gb|L38520.1|ATHDIM Arabidopsis thaliana diminuto (DIM) mRNA, com... 40 6.9 
>gb|AY104065.1| Zea mays PCO076650 mRNA sequence
          Length = 1990

 Score =  333 bits (168), Expect = 3e-88
 Identities = 222/240 (92%)
 Strand = Plus / Minus

                                                                        
Query: 218  cctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcgg 277
            ||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||||||||| |
Sbjct: 1779 cctcgtccgcgtaggccggctccagtatggccgcctccgcctcctgcacctccttctccg 1720

                                                                        
Query: 278  acttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtact 337
             ||||||||||||||||  ||||||||| ||||||||||| |||||||| || |||||||
Sbjct: 1719 tcttgcgccccttcttggacttgtagtacacgctcatgaacgtgcccaccgccccgtact 1660

                                                                        
Query: 338  tctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttca 397
            | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 tttggcggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttca 1600

                                                                        
Query: 398  gctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagcc 457
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 gctccgacaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagcc 1540
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>gb|AY523572.1| Zea mays brassinosteroid biosynthesis-like protein (DWF1) mRNA,
            complete cds
          Length = 2005

 Score =  329 bits (166), Expect = 5e-87
 Identities = 249/277 (89%)
 Strand = Plus / Minus

                                                                        
Query: 218  cctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcgg 277
            ||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||||||||| |
Sbjct: 1807 cctcgtccgcgtaggccggctccagtatggccgcctccgcctcctgcacctccttctccg 1748

                                                                        
Query: 278  acttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtact 337
             ||||||||||||||||  ||||||||| ||||||||||| |||||||| || |||||||
Sbjct: 1747 tcttgcgccccttcttggacttgtagtacacgctcatgaacgtgcccaccgccccgtact 1688

                                                                        
Query: 338  tctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttca 397
            | || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1687 tttggcggcagtgctcgtagtgcgacgcgtcgaacatgcgccaggagtccttctcgttca 1628

                                                                        
Query: 398  gctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagcc 457
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 gctccgacaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagcc 1568

                                                 
Query: 458  gctttaccgcctccacgccntcgaactgctcccccct 494
              |  || |||||| |||| | ||||| |||||||||
Sbjct: 1567 tgtgcacagcctccgcgccgttgaactcctcccccct 1531
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>gb|BT019154.1| Zea mays clone Contig817.F mRNA sequence
          Length = 867

 Score =  238 bits (120), Expect = 1e-59
 Identities = 210/240 (87%)
 Strand = Plus / Plus

                                                                       
Query: 218 cctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcgg 277
           ||||||| |||||||| ||||| || ||||| |||||  ||||||| ||||||||||| |
Sbjct: 249 cctcgtccgcgtaggccggctccagtatggccgcctccccctcctgcacctccttctccg 308

                                                                       
Query: 278 acttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtact 337
            ||||||||||||||||  ||||||||| || |||||||| |||||| |  | |||||||
Sbjct: 309 tcttgcgccccttcttggacttgtagtacaccctcatgaacgtgcccccccccccgtact 368

                                                                       
Query: 338 tctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttca 397
           | ||  ||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 369 tttgggggcagggctcgtagggcgacccgtcgaacatgcgccaaaagtccttctcgttca 428

                                                                       
Query: 398 gctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagcc 457
           |||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 429 gctccgacaccgcgtactgcgggtgggagctgtggttctcgatcagcccctgctccagcc 488
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>ref|NM_196346.1| Oryza sativa (japonica cultivar-group) putative Cell elongation
            protein DIMINUTO (Cell elongation protein Dwarf1)
            (OSJNBb0058B20.18), mRNA
          Length = 1686

 Score =  216 bits (109), Expect = 5e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcg 276
            ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 1682 gcctcatcagcgtaggctggctcgaggatggcggcctcggcttcctgcacctccttctca 1623

                                                                        
Query: 277  gacttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtac 336
            | ||| |  |||||||||  |||||||||||||||||| ||||| || ||||| || |||
Sbjct: 1622 gtcttccttcccttcttggacttgtagtagacgctcataaaggtaccgacggcaccatac 1563

                                                                        
Query: 337  ttctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttc 396
            || || ||||| ||||||||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 1562 ttttggcggcaatgctcgtagtgagaagcatcaaacatcctccagaagtccttctcgttg 1503

                                                                        
Query: 397  agctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagc 456
            ||||| |  || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1502 agctcagatacagcgtactgtggctggtagctgtggttctcaatcagccactgctccagc 1443

             
Query: 457  c 457
            |
Sbjct: 1442 c 1442
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>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OSJNBb0058B20 from chromosome 10, complete sequence
          Length = 156232

 Score =  216 bits (109), Expect = 5e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                         
Query: 217   gcctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcg 276
             ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 76215 gcctcatcagcgtaggctggctcgaggatggcggcctcggcttcctgcacctccttctca 76156

                                                                         
Query: 277   gacttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtac 336
             | ||| |  |||||||||  |||||||||||||||||| ||||| || ||||| || |||
Sbjct: 76155 gtcttccttcccttcttggacttgtagtagacgctcataaaggtaccgacggcaccatac 76096

                                                                         
Query: 337   ttctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttc 396
             || || ||||| ||||||||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 76095 ttttggcggcaatgctcgtagtgagaagcatcaaacatcctccagaagtccttctcgttg 76036

                                                                         
Query: 397   agctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagc 456
             ||||| |  || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 76035 agctcagatacagcgtactgtggctggtagctgtggttctcaatcagccactgctccagc 75976

              
Query: 457   c 457
             |
Sbjct: 75975 c 75975
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  216 bits (109), Expect = 5e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                            
Query: 217      gcctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcg 276
                ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 12844635 gcctcatcagcgtaggctggctcgaggatggcggcctcggcttcctgcacctccttctca 12844694

                                                                            
Query: 277      gacttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtac 336
                | ||| |  |||||||||  |||||||||||||||||| ||||| || ||||| || |||
Sbjct: 12844695 gtcttccttcccttcttggacttgtagtagacgctcataaaggtaccgacggcaccatac 12844754

                                                                            
Query: 337      ttctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttc 396
                || || ||||| ||||||||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 12844755 ttttggcggcaatgctcgtagtgagaagcatcaaacatcctccagaagtccttctcgttg 12844814

                                                                            
Query: 397      agctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagc 456
                ||||| |  || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 12844815 agctcagatacagcgtactgtggctggtagctgtggttctcaatcagccactgctccagc 12844874

                 
Query: 457      c 457
                |
Sbjct: 12844875 c 12844875
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>dbj|AK111949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C04, full
           insert sequence
          Length = 1124

 Score =  216 bits (109), Expect = 5e-53
 Identities = 208/241 (86%)
 Strand = Plus / Minus

                                                                       
Query: 217 gcctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcg 276
           ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 817 gcctcatcagcgtaggctggctcgaggatggcggcctcggcttcctgcacctccttctca 758

                                                                       
Query: 277 gacttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtac 336
           | ||| |  |||||||||  |||||||||||||||||| ||||| || ||||| || |||
Sbjct: 757 gtcttccttcccttcttggacttgtagtagacgctcataaaggtaccgacggcaccatac 698

                                                                       
Query: 337 ttctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttc 396
           || || ||||| ||||||||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 697 ttttggcggcaatgctcgtagtgagaagcatcaaacatcctccagaagtccttctcgttg 638

                                                                       
Query: 397 agctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagc 456
           ||||| |  || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 637 agctcagatacagcgtactgtggctggtagctgtggttctcaatcagccactgctccagc 578

            
Query: 457 c 457
           |
Sbjct: 577 c 577
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  216 bits (109), Expect = 5e-53
 Identities = 208/241 (86%)
 Strand = Plus / Plus

                                                                            
Query: 217      gcctcgtcggcgtaggcgggctcgaggatggcggcctcggcctcctggacctccttctcg 276
                ||||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 12851975 gcctcatcagcgtaggctggctcgaggatggcggcctcggcttcctgcacctccttctca 12852034

                                                                            
Query: 277      gacttgcgccccttcttgctcttgtagtagacgctcatgaaggtgcccacggcgccgtac 336
                | ||| |  |||||||||  |||||||||||||||||| ||||| || ||||| || |||
Sbjct: 12852035 gtcttccttcccttcttggacttgtagtagacgctcataaaggtaccgacggcaccatac 12852094

                                                                            
Query: 337      ttctgccggcagtgctcgtagtgcgacgcgtcgaacatgcgccagaagtccttctcgttc 396
                || || ||||| ||||||||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 12852095 ttttggcggcaatgctcgtagtgagaagcatcaaacatcctccagaagtccttctcgttg 12852154

                                                                            
Query: 397      agctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagccactgctccagc 456
                ||||| |  || |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 12852155 agctcagatacagcgtactgtggctggtagctgtggttctcaatcagccactgctccagc 12852214

                 
Query: 457      c 457
                |
Sbjct: 12852215 c 12852215
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>gb|AF513859.1| Gossypium hirsutum ovule/fiber cell elongation protein Ghfe1 (Ghfe1)
            mRNA, complete cds
          Length = 1849

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 367  tcgaacatgcgccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtag 426
            |||||||| | |||||| ||||||||||| ||||||| ||| || ||||| |||||| | 
Sbjct: 1575 tcgaacatcctccagaaatccttctcgttgagctccgacactgcatactgtggctggaaa 1516

                                        
Query: 427  ctgtggttctcgatcagccactgctcca 454
            |||||||| | ||||||||| |||||||
Sbjct: 1515 ctgtggtttttgatcagccattgctcca 1488
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>gb|DQ122178.1| Gossypium hirsutum brassinosteroid biosynthetic protein DWARF1 mRNA,
            partial cds
          Length = 1515

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 367  tcgaacatgcgccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtag 426
            |||||||| | |||||| ||||||||||| ||||||| ||| || ||||| |||||| | 
Sbjct: 1226 tcgaacatcctccagaaatccttctcgttgagctccgacactgcatactgtggctggaaa 1167

                                        
Query: 427  ctgtggttctcgatcagccactgctcca 454
            |||||||| | ||||||||| |||||||
Sbjct: 1166 ctgtggtttttgatcagccattgctcca 1139
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>ref|XM_363816.1| Magnaporthe grisea 70-15 hypothetical protein (MG01742.4) partial
            mRNA
          Length = 2610

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 233  cgggctcgaggatggcggcctcggcc 258
            |||||||||||||||||| |||||||
Sbjct: 2164 cgggctcgaggatggcgggctcggcc 2139
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>ref|XM_968674.1| PREDICTED: Tribolium castaneum similar to CG18076-PH, isoform H
            (LOC662585), mRNA
          Length = 25527

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 107  ttaaggaagcaaccaaaaaagg 128
            ||||||||||||||||||||||
Sbjct: 9131 ttaaggaagcaaccaaaaaagg 9152
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>gb|DQ396552.1| Morus alba diminuto (DWF1) mRNA, partial cds
          Length = 384

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 115/146 (78%)
 Strand = Plus / Minus

                                                                       
Query: 301 tagtagacgctcatgaaggtgcccacggcgccgtacttctgccggcagtgctcgtagtgc 360
           ||||||||||||||||| || || || || || ||||||  || ||||||||||||| | 
Sbjct: 353 tagtagacgctcatgaaagttccgacagcaccatacttcctcctgcagtgctcgtagagg 294

                                                                       
Query: 361 gacgcgtcgaacatgcgccagaagtccttctcgttcagctccgtcaccgcgtactgcggc 420
              || || ||||| | ||||||||  |||||    ||||||| ||| || |||||||||
Sbjct: 293 ccggcatcaaacatcctccagaagtttttctcagagagctccgacactgcatactgcggc 234

                                     
Query: 421 tggtagctgtggttctcgatcagcca 446
           ||| | | ||| ||||||||||||||
Sbjct: 233 tggaatccgtgattctcgatcagcca 208
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>ref|NM_180285.1| Arabidopsis thaliana DWF1 (DIMINUTO 1); catalytic AT3G19820 (DWF1)
            transcript variant AT3G19820.2 mRNA, complete cds
          Length = 1963

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1581 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1522

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1521 tatcagcca 1513
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>ref|NM_112872.2| Arabidopsis thaliana DWF1 (DIMINUTO 1); catalytic AT3G19820 (DWF1)
            transcript variant AT3G19820.1 mRNA, complete cds
          Length = 1940

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1557 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1498

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1497 tatcagcca 1489
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 240    gaggatggcggcctcggcctc 260
              |||||||||||||||||||||
Sbjct: 708812 gaggatggcggcctcggcctc 708792
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>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   cctcggcctcctggacctcct 271
             |||||||||||||||||||||
Sbjct: 80743 cctcggcctcctggacctcct 80723
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>gb|BT000367.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1729

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1521 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1462

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1461 tatcagcca 1453
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>gb|AY096472.1| Arabidopsis thaliana putative cell elongation protein Dwarf1
            (At3g19820) mRNA, complete cds
          Length = 1717

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1521 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1462

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1461 tatcagcca 1453
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>gb|AY072216.1| Arabidopsis thaliana putative cell elongation protein Dwarf1
            (At3g19820) mRNA, complete cds
          Length = 1945

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1581 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1522

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1521 tatcagcca 1513
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>gb|AY081286.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1921

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1581 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1522

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1521 tatcagcca 1513
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 144     cagctccgaacggccgacgacgacc 168
               |||||||||||| ||||||||||||
Sbjct: 3149153 cagctccgaacgaccgacgacgacc 3149177
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 251     cctcggcctcctggacctcct 271
               |||||||||||||||||||||
Sbjct: 2800936 cctcggcctcctggacctcct 2800916
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>dbj|AB025631.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPN9
          Length = 81035

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                         
Query: 378   ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
             |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 12775 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 12834

                      
Query: 438   gatcagcca 446
              ||||||||
Sbjct: 12835 tatcagcca 12843
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>dbj|AK102797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108D09, full
           insert sequence
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 cctcggcctcctggacctcct 271
           |||||||||||||||||||||
Sbjct: 527 cctcggcctcctggacctcct 507
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>gb|AY105978.1| Zea mays PCO082600 mRNA sequence
          Length = 648

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 366 gtcgaacatgcgccagaagtccttctcgt 394
           ||||| |||||||||||| ||||||||||
Sbjct: 143 gtcgagcatgcgccagaactccttctcgt 115
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 251     cctcggcctcctggacctcct 271
               |||||||||||||||||||||
Sbjct: 2809967 cctcggcctcctggacctcct 2809947
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>gb|U12400.1|ATU12400 Arabidopsis thaliana Columbia Dwarf1 (DWF1) mRNA, complete cds
          Length = 1895

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  ccagaagtccttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctc 437
            |||||||  ||||||||  ||||| | |||||||||||| |||||| | |  ||||||||
Sbjct: 1536 ccagaagctcttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctc 1477

                     
Query: 438  gatcagcca 446
             ||||||||
Sbjct: 1476 tatcagcca 1468
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>gb|AY426060.1| Aclerda sp. PJG-2003 18S small subunit ribosomal RNA gene, partial
           sequence
          Length = 630

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tccgaacggccgacgacgac 167
           ||||||||||||||||||||
Sbjct: 218 tccgaacggccgacgacgac 199
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 157    ccgacgacgaccagcatctcctcg 180
              |||||| |||||||||||||||||
Sbjct: 354982 ccgacggcgaccagcatctcctcg 354959
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>emb|AL139035.27| Human DNA sequence from clone RP11-214F16 on chromosome 13 Contains the
             TM9SF2 gene for transmembrane 9 superfamily member 2
             (P76), three novel genes, a cofilin 1 (non-muscle) (CFL1)
             pseudogene, the 5' end of the CLYBL gene for citrate lyase
             beta like (CLB bA134O15.1) and two CpG islands, complete
             sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaaaaggaaatcaattaat 140
             ||||||||||||||||||||
Sbjct: 59070 aaaaaaggaaatcaattaat 59051
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>ref|XM_971262.1| PREDICTED: Tribolium castaneum hypothetical protein LOC660731
            (LOC660731), mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  aagaaaccgaaaccgaaaca 207
            ||||||||||||||||||||
Sbjct: 1138 aagaaaccgaaaccgaaaca 1157
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 233   cgggctcgaggatggcggcctcggcctc 260
             |||||||| ||| |||||||||||||||
Sbjct: 46624 cgggctcggggacggcggcctcggcctc 46651
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>emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0042I07,
              complete sequence
          Length = 129198

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ggcctcggcctcctggacct 268
              ||||||||||||||||||||
Sbjct: 117250 ggcctcggcctcctggacct 117231
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>gb|AC009381.10| Drosophila melanogaster 3L BAC RP98-13N10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167816

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    ggacttgcgccccttcttgctctt 299
              ||||||||| ||||||||||||||
Sbjct: 118039 ggacttgcgacccttcttgctctt 118016
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>gb|AE012036.1| Xanthomonas axonopodis pv. citri str. 306,  section 414 of 469 of the
            complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  atggcggcctcggcctcctg 263
            ||||||||||||||||||||
Sbjct: 2900 atggcggcctcggcctcctg 2881
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>ref|NM_140897.2| Drosophila melanogaster CG8103-RA, transcript variant A (Mi-2), mRNA
          Length = 6416

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  ggacttgcgccccttcttgctctt 299
            ||||||||| ||||||||||||||
Sbjct: 2188 ggacttgcgacccttcttgctctt 2165
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>ref|NM_001014591.1| Drosophila melanogaster CG8103-RB, transcript variant B (Mi-2), mRNA
          Length = 6419

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  ggacttgcgccccttcttgctctt 299
            ||||||||| ||||||||||||||
Sbjct: 2191 ggacttgcgacccttcttgctctt 2168
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    cagccactgctccagccgct 460
              ||||||||||||||||||||
Sbjct: 227017 cagccactgctccagccgct 227036
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     cgacgaccagcatctcctcg 180
               ||||||||||||||||||||
Sbjct: 2562094 cgacgaccagcatctcctcg 2562075
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     cgtcggcgtaggcgggctcg 240
               ||||||||||||||||||||
Sbjct: 3085271 cgtcggcgtaggcgggctcg 3085252
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 249      ggcctcggcctcctggacct 268
                ||||||||||||||||||||
Sbjct: 18026970 ggcctcggcctcctggacct 18026951
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>ref|XM_394394.2| PREDICTED: Apis mellifera similar to ENSANGP00000010462 (LOC410918),
            mRNA
          Length = 3228

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  acgacgaccagcatctcctcgtcc 183
            ||||||||||||| ||||||||||
Sbjct: 2269 acgacgaccagcagctcctcgtcc 2292
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>gb|AC073088.5| Homo sapiens BAC clone RP11-323P8 from 2, complete sequence
          Length = 55713

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gaagcaaccaaaaaaggaaa 131
             ||||||||||||||||||||
Sbjct: 39570 gaagcaaccaaaaaaggaaa 39551
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     accgcgtactgcggctggta 425
               ||||||||||||||||||||
Sbjct: 8736644 accgcgtactgcggctggta 8736663



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 155     ggccgacgacgaccagcatctcctcgtc 182
               ||||||||||||||  ||||||||||||
Sbjct: 2031977 ggccgacgacgaccttcatctcctcgtc 2032004
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 231     ggcgggctcgaggatggcggcctcggcc 258
               |||||||||||||||| | |||||||||
Sbjct: 4368604 ggcgggctcgaggatgcccgcctcggcc 4368631
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>emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on chromosome X, complete
             sequence
          Length = 159014

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   caaccaaaaaaggaaatcaa 135
             ||||||||||||||||||||
Sbjct: 97814 caaccaaaaaaggaaatcaa 97833
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>gb|AF119716.1|AF119716 Drosophila melanogaster dMi-2 protein (dMi-2) mRNA, complete cds
          Length = 6475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  ggacttgcgccccttcttgctctt 299
            ||||||||| ||||||||||||||
Sbjct: 2189 ggacttgcgacccttcttgctctt 2166
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>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete
             sequence
          Length = 234263

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   ggacttgcgccccttcttgctctt 299
             ||||||||| ||||||||||||||
Sbjct: 92733 ggacttgcgacccttcttgctctt 92756
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>gb|L38520.1|ATHDIM Arabidopsis thaliana diminuto (DIM) mRNA, complete cds
          Length = 1940

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  cttctcgttcagctccgtcaccgcgtactgcggctggtagctgtggttctcgatcagcca 446
            ||||||||  ||||| | |||||||||||| |||||| | |  |||||||| ||||||||
Sbjct: 1548 cttctcgtcgagctcagacaccgcgtactgaggctggaatccatggttctctatcagcca 1489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,887,885
Number of Sequences: 3902068
Number of extensions: 3887885
Number of successful extensions: 88839
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87830
Number of HSP's gapped (non-prelim): 1009
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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