| Clone Name | rbaal1i03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF040648.2| Caenorhabditis elegans fosmid H19M22, complete sequence Length = 44699 Score = 44.1 bits (22), Expect = 0.044 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 tctaataatcggagaaaaactg 30 |||||||||||||||||||||| Sbjct: 18426 tctaataatcggagaaaaactg 18405
>ref|XM_751932.1| Ustilago maydis 521 hypothetical protein (UM00878.1) partial mRNA Length = 2481 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ctgcaccggtggtgctgcttg 58 ||||||||||||||||||||| Sbjct: 964 ctgcaccggtggtgctgcttg 944
>emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chromosome 4 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 174731 Score = 40.1 bits (20), Expect = 0.68 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gaaaaactgaagctgcctgc 41 |||||||||||||||||||| Sbjct: 146098 gaaaaactgaagctgcctgc 146117
>gb|AC099518.3| Homo sapiens chromosome 16 clone RP11-626G11, complete sequence Length = 216264 Score = 40.1 bits (20), Expect = 0.68 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gaaaaactgaagctgcctgc 41 |||||||||||||||||||| Sbjct: 168486 gaaaaactgaagctgcctgc 168467
>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete sequence Length = 132103 Score = 40.1 bits (20), Expect = 0.68 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 agaaaaactgaagctgcctg 40 |||||||||||||||||||| Sbjct: 20585 agaaaaactgaagctgcctg 20604
>ref|NM_196683.1| Oryza sativa (japonica cultivar-group) putative anter-specific proline-rich protein (OSJNBb0016G17.12), mRNA Length = 1077 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 48 cctgcaccggtggtgctgc 66
>gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete sequence Length = 166977 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 ggtgctgcttgacttgcat 66 ||||||||||||||||||| Sbjct: 141703 ggtgctgcttgacttgcat 141685
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 76349 cctgcaccggtggtgctgc 76331
>gb|AC155952.2| Xenopus tropicalis clone CH216-120G20, complete sequence Length = 169117 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 ggtgctgcttgacttgcat 66 ||||||||||||||||||| Sbjct: 94839 ggtgctgcttgacttgcat 94821
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 15222650 cctgcaccggtggtgctgc 15222632
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 4437289 cctgcaccggtggtgctgc 4437271
>dbj|AK065583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034G20, full insert sequence Length = 1505 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 92 cctgcaccggtggtgctgc 110
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 cctgcaccggtggtgctgc 55 ||||||||||||||||||| Sbjct: 15230891 cctgcaccggtggtgctgc 15230873 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 497,764 Number of Sequences: 3902068 Number of extensions: 497764 Number of successful extensions: 39348 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39247 Number of HSP's gapped (non-prelim): 101 length of query: 69 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 48 effective length of database: 17,151,101,840 effective search space: 823252888320 effective search space used: 823252888320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)