ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28f17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (... 381 e-103
2emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 80 3e-12
3gb|AY104952.1| Zea mays PCO092342 mRNA sequence 54 2e-04
4gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence 42 0.64
5gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence 40 2.5
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.5
7emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chro... 40 2.5
8emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 i... 40 2.5
9gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complet... 40 2.5
10gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.5
11gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Ca... 40 2.5
12gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Can... 40 2.5
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
14dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
15emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 i... 40 2.5
16dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
17dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
18ref|NM_179895.1| Arabidopsis thaliana unknown protein AT2G34310 ... 38 10.0
19ref|NM_128982.2| Arabidopsis thaliana unknown protein AT2G34310 ... 38 10.0
20ref|NM_179896.1| Arabidopsis thaliana unknown protein AT2G34310 ... 38 10.0
21gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EG... 38 10.0
22gb|AE001397.1| Plasmodium falciparum 3D7 chromosome 2 section 34... 38 10.0
23gb|AY588246.1| Homo sapiens epidermal growth factor receptor (er... 38 10.0
24emb|Y11732.1|OMTIGHGEN Oreochromis mossambicus tigH gene 38 10.0
25gb|AY136371.1| Arabidopsis thaliana expressed protein (At2g34310... 38 10.0
26dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp... 38 10.0
27gb|AC136143.4| Papio anubis clone rp41-5m22, complete sequence 38 10.0
28gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence 38 10.0
29gb|AC009840.7| Drosophila melanogaster 3L BAC RP98-2B14 (Roswell... 38 10.0
30gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 ma... 38 10.0
31gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, com... 38 10.0
32gb|AC103794.2| Homo sapiens chromosome 11, clone CTD-3096P4, com... 38 10.0
33gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, comple... 38 10.0
34gb|AC025623.8| Homo sapiens chromosome 11, clone RP11-417O17, co... 38 10.0
35dbj|AK085535.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 38 10.0
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
37gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7... 38 10.0
38gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 38 10.0
39dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 10.0
40dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
41dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 38 10.0
42gb|AF093402.1|AF093402 Drosophila melanogaster presenilin (PS) g... 38 10.0
43emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in... 38 10.0
44gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72... 38 10.0
45gb|L43967.2| Mycoplasma genitalium G37, complete genome 38 10.0
46gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 38 10.0
47dbj|AP005329.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 10.0
48emb|AL844515.6| Mouse DNA sequence from clone RP23-133G5 on chro... 38 10.0 
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score =  381 bits (192), Expect = e-103
 Identities = 199/200 (99%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgatttagggcaagtgcataggctaaaacattaggaccacaagttccgcaaaaagcggg 60
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 ttgatttaggg-aagtgcataggctaaaacattaggaccacaagttccgcaaaaagcggg 1319

                                                                        
Query: 61   agtaatacaaacagccaggccttgtatataaagtttctaataatacaatctttcaagtga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 agtaatacaaacagccaggccttgtatataaagtttctaataatacaatctttcaagtga 1259

                                                                        
Query: 121  acgacaaaggtgtaattggtttattggaactcaaattccgtaacgaaacacagcaacgaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 acgacaaaggtgtaattggtttattggaactcaaattccgtaacgaaacacagcaacgaa 1199

                                
Query: 181  tattgacgaacccacccaac 200
            ||||||||||||||||||||
Sbjct: 1198 tattgacgaacccacccaac 1179
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>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 101  taatacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccg 160
            |||||||||||||||| |||||||||| | |||| |  ||||||||||||||||||||||
Sbjct: 1419 taatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccg 1360

                    
Query: 161  taacgaaa 168
            ||| ||||
Sbjct: 1359 taatgaaa 1352
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>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 64/75 (85%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   ttctaataatacaatctttcaag-tgaacgacaaaggtgtaattggtttattggaactca 153
            ||||||| |||||||| |||||| ||| |||  ||||| || |  |||||||||||||||
Sbjct: 1684 ttctaatgatacaatccttcaaggtgatcgaagaaggtatattccgtttattggaactca 1625

                           
Query: 154  aattccgtaacgaaa 168
            |||||||||| ||||
Sbjct: 1624 aattccgtaatgaaa 1610
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>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 144 ttggaactcaaattccgtaacgaaa 168
           |||||||||||||||||||| ||||
Sbjct: 921 ttggaactcaaattccgtaatgaaa 897
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>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence
          Length = 35325

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    aaagtttctaataatacaat 109
             ||||||||||||||||||||
Sbjct: 20319 aaagtttctaataatacaat 20300
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 95      ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
               ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 9412442 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9412403
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>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part
              of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G)
              and a novel gene, complete sequence
          Length = 145136

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     aaagtttctaataatacaat 109
              ||||||||||||||||||||
Sbjct: 103537 aaagtttctaataatacaat 103518
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>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18,
              complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     taaagtttctaataatacaa 108
              ||||||||||||||||||||
Sbjct: 107638 taaagtttctaataatacaa 107657
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>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence
          Length = 195101

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tatataaagtttctaataat 104
             ||||||||||||||||||||
Sbjct: 13115 tatataaagtttctaataat 13096
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 95     ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
              ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 109842 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 109803
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>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207228

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gacaaaggtgtaattggttt 142
           ||||||||||||||||||||
Sbjct: 337 gacaaaggtgtaattggttt 318
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>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 135177

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gacaaaggtgtaattggttt 142
             ||||||||||||||||||||
Sbjct: 76946 gacaaaggtgtaattggttt 76927
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 95      ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
               ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 9410563 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9410524
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>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 95   ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
            ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 1692 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1653
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>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18,
              complete sequence
          Length = 176163

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     taaagtttctaataatacaa 108
              ||||||||||||||||||||
Sbjct: 165685 taaagtttctaataatacaa 165666
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>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 95  ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
           ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 357 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 318
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>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 95   ttctaataatacaatctttcaagtgaacgacaaaggtgta 134
            ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 1303 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1264
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>ref|NM_179895.1| Arabidopsis thaliana unknown protein AT2G34310 transcript variant
           AT2G34310.2 mRNA, complete cds
          Length = 1149

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 107 aatctttcaagtgaacgac 125
           |||||||||||||||||||
Sbjct: 58  aatctttcaagtgaacgac 76
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>ref|NM_128982.2| Arabidopsis thaliana unknown protein AT2G34310 transcript variant
           AT2G34310.1 mRNA, complete cds
          Length = 1254

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 107 aatctttcaagtgaacgac 125
           |||||||||||||||||||
Sbjct: 58  aatctttcaagtgaacgac 76
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>ref|NM_179896.1| Arabidopsis thaliana unknown protein AT2G34310 transcript variant
           AT2G34310.3 mRNA, complete cds
          Length = 1130

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 107 aatctttcaagtgaacgac 125
           |||||||||||||||||||
Sbjct: 58  aatctttcaagtgaacgac 76
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>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete
             cds, alternatively spliced; and 5S ribosomal RNA gene,
             complete sequence
          Length = 197496

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   tggtttattggaactcaaa 155
             |||||||||||||||||||
Sbjct: 97241 tggtttattggaactcaaa 97259
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>gb|AE001397.1| Plasmodium falciparum 3D7 chromosome 2 section 34 of 73 of the
            complete sequence
          Length = 14529

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   atataaagtttctaataat 104
            |||||||||||||||||||
Sbjct: 1440 atataaagtttctaataat 1422
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>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia
             viral (v-erb-b) oncogene homolog, avian) (EGFR) gene,
             complete cds
          Length = 192168

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   tggtttattggaactcaaa 155
             |||||||||||||||||||
Sbjct: 89958 tggtttattggaactcaaa 89976
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>emb|Y11732.1|OMTIGHGEN Oreochromis mossambicus tigH gene
          Length = 5570

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   tatataaagtttctaataa 103
            |||||||||||||||||||
Sbjct: 2362 tatataaagtttctaataa 2380
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>gb|AY136371.1| Arabidopsis thaliana expressed protein (At2g34310) mRNA, complete
           cds
          Length = 1111

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 107 aatctttcaagtgaacgac 125
           |||||||||||||||||||
Sbjct: 20  aatctttcaagtgaacgac 38
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>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 115     aagtgaacgacaaaggtgt 133
               |||||||||||||||||||
Sbjct: 1777873 aagtgaacgacaaaggtgt 1777855
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>gb|AC136143.4| Papio anubis clone rp41-5m22, complete sequence
          Length = 186148

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 67     acaaacagccaggccttgt 85
              |||||||||||||||||||
Sbjct: 177884 acaaacagccaggccttgt 177866
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>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence
          Length = 204007

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     acaaacagccaggccttgt 85
              |||||||||||||||||||
Sbjct: 129387 acaaacagccaggccttgt 129405
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>gb|AC009840.7| Drosophila melanogaster 3L BAC RP98-2B14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 194790

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 174   caacgaatattgacgaacc 192
             |||||||||||||||||||
Sbjct: 54657 caacgaatattgacgaacc 54639
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>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete
             sequence
          Length = 112763

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   aatctttcaagtgaacgac 125
             |||||||||||||||||||
Sbjct: 50392 aatctttcaagtgaacgac 50374
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>gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, complete sequence
          Length = 154774

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     tgcataggctaaaacatta 34
              |||||||||||||||||||
Sbjct: 112936 tgcataggctaaaacatta 112954
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>gb|AC103794.2| Homo sapiens chromosome 11, clone CTD-3096P4, complete sequence
          Length = 211445

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     tgcataggctaaaacatta 34
              |||||||||||||||||||
Sbjct: 204126 tgcataggctaaaacatta 204108
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>gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, complete sequence
          Length = 69570

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   ttgtatataaagtttctaa 100
            |||||||||||||||||||
Sbjct: 8271 ttgtatataaagtttctaa 8289
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>gb|AC025623.8| Homo sapiens chromosome 11, clone RP11-417O17, complete sequence
          Length = 151329

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     tgcataggctaaaacatta 34
              |||||||||||||||||||
Sbjct: 127321 tgcataggctaaaacatta 127303
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>dbj|AK085535.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length
          enriched library, clone:D630038O13
          product:unclassifiable, full insert sequence
          Length = 933

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 75 ccaggccttgtatataaag 93
          |||||||||||||||||||
Sbjct: 77 ccaggccttgtatataaag 95
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 85       tatataaagtttctaataa 103
                |||||||||||||||||||
Sbjct: 23983330 tatataaagtttctaataa 23983348
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>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   tggtttattggaactcaaa 155
             |||||||||||||||||||
Sbjct: 97241 tggtttattggaactcaaa 97259
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>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     taaagtttctaataataca 107
              |||||||||||||||||||
Sbjct: 195220 taaagtttctaataataca 195238
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 43      agttccgcaaaaagcggga 61
               |||||||||||||||||||
Sbjct: 1458859 agttccgcaaaaagcggga 1458877
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    tatataaagtttctaataa 103
             |||||||||||||||||||
Sbjct: 18368 tatataaagtttctaataa 18386
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     tatataaagtttctaataa 103
              |||||||||||||||||||
Sbjct: 117294 tatataaagtttctaataa 117312
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>gb|AF093402.1|AF093402 Drosophila melanogaster presenilin (PS) gene, alternatively spliced
           products, complete cds
          Length = 5858

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 174 caacgaatattgacgaacc 192
           |||||||||||||||||||
Sbjct: 348 caacgaatattgacgaacc 330
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>emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in linkage group 18,
             complete sequence
          Length = 93818

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    aaagtttctaataatacaa 108
             |||||||||||||||||||
Sbjct: 12691 aaagtttctaataatacaa 12709
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>gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72 of 83 of the complete
              sequence
          Length = 301136

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 174    caacgaatattgacgaacc 192
              |||||||||||||||||||
Sbjct: 103949 caacgaatattgacgaacc 103931
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>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 90     aaagtttctaataatacaa 108
              |||||||||||||||||||
Sbjct: 343728 aaagtttctaataatacaa 343710
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 115     aagtgaacgacaaaggtgt 133
               |||||||||||||||||||
Sbjct: 1190230 aagtgaacgacaaaggtgt 1190212
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>dbj|AP005329.3| Homo sapiens genomic DNA, chromosome 18 clone:RP13-270P17, complete
             sequence
          Length = 178812

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    aaaacattaggaccacaag 44
             |||||||||||||||||||
Sbjct: 10038 aaaacattaggaccacaag 10056
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>emb|AL844515.6| Mouse DNA sequence from clone RP23-133G5 on chromosome 2, complete
             sequence
          Length = 216464

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   tacaatctttcaagtgaac 122
             |||||||||||||||||||
Sbjct: 79108 tacaatctttcaagtgaac 79126


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,641,995
Number of Sequences: 3902068
Number of extensions: 1641995
Number of successful extensions: 104899
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104665
Number of HSP's gapped (non-prelim): 234
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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