>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  428 bits (216), Expect = e-117
 Identities = 317/350 (90%), Gaps = 3/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 103 tacatattgttggccgtataacgcggcccacacacaagcatagcaacacgatgactgctc 162
           |||||||||||||||||||| | || |||||| | ||||||||   | | ||||||||||
Sbjct: 477 tacatattgttggccgtatagcacgacccacagagaagcatagg--cgccatgactgctc 420

                                                                       
Query: 163 atctcatctgagctttattctaggcggcacacctcgtccgagcctgaagccctgaagcga 222
           ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||  ||
Sbjct: 419 atctcatctgagctttattttaggcggcacccctcgtctgagactgaagccctgaacgga 360

                                                                       
Query: 223 tcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcggcgca 282
           |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 tcagtgctttttgcatggcccgccgcaggtgccatcgacggtgctcttcatgtcggcgca 300

                                                                       
Query: 283 gcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcctttggggca 342
            |||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 299 ccggaacgtcttgtgagggctgggcgtcaccacgcggcaggccgagcagcccttggggca 240

                                                                       
Query: 343 cttggggtgggccgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcann 402
           || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||  
Sbjct: 239 ctgggggtggg-cgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagc 181

                                                             
Query: 403 acttggggaagaagtcngcnttcacgtgggagaggatncccatgaccagg 452
           |||||||||||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 180 acttggggaagaagtcggcgttcacgtgtgagaggatccccatgaccagg 131

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  202 bits (102), Expect = 7e-49
 Identities = 202/235 (85%), Gaps = 4/235 (1%)
 Strand = Plus / Minus

                                                                       
Query: 218 agcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatgtcg 277
           |||||||||| ||| |||||||| || |||||||||||||||||||||   |||||||||
Sbjct: 286 agcgatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcg 227

                                                                       
Query: 278 gcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcctttg 337
           |||||||||||||||| |   ||| ||| ||||||||||||||| || ||||||||  ||
Sbjct: 226 gcgcagcggaacgtctgg---gggttcgtggtcaccacgcggcacgccgagcagccggtg 170

                                                                       
Query: 338 gggcacttggggtgggccgtcgtcgcagacgtcgacccccgagaaggacctgcagttgtt 397
           |||||||  || ||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 169 gggcactgcggatgggc-gtcgtcgcagacgtcgaccccggagaaggacctgcagttgtt 111

                                                                  
Query: 398 gcannacttggggaagaagtcngcnttcacgtgggagaggatncccatgaccagg 452
           |||  || |||||||  || | || |||||||| |||||||  ||||||||||||
Sbjct: 110 gcagcacgtggggaaatagacggcgttcacgtgcgagaggactcccatgaccagg 56

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  184 bits (93), Expect = 2e-43
 Identities = 202/238 (84%), Gaps = 4/238 (1%)
 Strand = Plus / Minus

                                                                       
Query: 215 tgaagcgatcagtgctttttgcatgggccaccgcaggtgccgtcgacggtgctcttcatg 274
           |||| |||||||| ||| ||||| || ||||||||||||||||||||||||   ||||| 
Sbjct: 350 tgaaccgatcagtacttcttgcagggtccaccgcaggtgccgtcgacggtggatttcata 291

                                                                       
Query: 275 tcggcgcagcggaacgtcttgtgagggctcggggtcaccacgcggcaggcggagcagcct 334
           || ||||||||  || | | |   |||||||  | |||||||||||| || |||||||| 
Sbjct: 290 tccgcgcagcgccacatttcg---gggctcgtcgacaccacgcggcacgccgagcagccc 234

                                                                       
Query: 335 ttggggcacttggggtgggccgtcgtcgcagacgtcgacccccgagaaggacctgcagtt 394
           | ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tggggacacttggggtgggc-gtcgtcgcagacgtcgacccccgagaaggacctgcagtt 175

                                                                     
Query: 395 gttgcannacttggggaagaagtcngcnttcacgtgggagaggatncccatgaccagg 452
           ||||||  |||||||||| || || || |||||||| |||||||  ||||||||||||
Sbjct: 174 gttgcagcacttggggaaaaaatcggcgttcacgtgtgagaggagtcccatgaccagg 117



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 47  caacaagcaacaccagctttttgtcgagagagaaaacacagtgacga 93
           ||||||||||||||| |||||| |||||||||||||||||| |||||
Sbjct: 513 caacaagcaacaccaactttttctcgagagagaaaacacagcgacga 467

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/98 (81%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 355 cgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcannacttggggaaga 414
           |||| ||||||||  || ||||||||||| |||||||||||| |||  ||||||||||  
Sbjct: 193 cgtcatcgcagaccacggcccccgagaagaacctgcagttgtcgcagcacttggggaac- 135

                                                 
Query: 415 agtcngcnttcacgtgggagaggatncccatgaccagg 452
             || || ||| | || |||||||| ||||||||||||
Sbjct: 134 --tcggcgttcgcctgtgagaggattcccatgaccagg 99

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 355 cgtcgtcgcagacgtcgacccccgagaaggacctgcagttgt 396
           |||||||||||||  || ||||||||||| ||||||||||||
Sbjct: 214 cgtcgtcgcagaccacggcccccgagaagaacctgcagttgt 173

>emb|AL358787.12| Human DNA sequence from clone RP11-181F12 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 118034

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    attcaacaagcaacaccagct 64
             |||||||||||||||||||||
Sbjct: 45438 attcaacaagcaacaccagct 45458

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    tgccgtcgacggtgctcttca 272
              |||||||||||||||||||||
Sbjct: 634922 tgccgtcgacggtgctcttca 634902

>ref|NM_001040330.1| Danio rerio zgc:136662 (zgc:136662), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  gcaggtgccgtcgacggtgc 266
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene
              cluster, complete sequence
          Length = 138203

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 353    gccgtcgtcgcagacgtcgacccc 376
              ||||||||||| ||||||||||||
Sbjct: 108197 gccgtcgtcgccgacgtcgacccc 108174

>gb|AC117230.3| Mus musculus BAC clone RP23-385F15 from 16, complete sequence
          Length = 184556

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tttattcaacaagcaacacc 60
             ||||||||||||||||||||
Sbjct: 83217 tttattcaacaagcaacacc 83198

>ref|NM_001012370.1| Danio rerio exostoses (multiple) 1c (ext1c), mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  gcaggtgccgtcgacggtgc 266
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156

>gb|BC115216.1| Danio rerio exostoses (multiple) 1c, mRNA (cDNA clone MGC:136662
            IMAGE:8000407), complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  gcaggtgccgtcgacggtgc 266
            ||||||||||||||||||||
Sbjct: 1389 gcaggtgccgtcgacggtgc 1408

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ctgctcatctcatctgagct 176
             ||||||||||||||||||||
Sbjct: 86150 ctgctcatctcatctgagct 86131

>ref|XM_680169.1| PREDICTED: Danio rerio similar to EXT1c (LOC572763), partial mRNA
          Length = 240

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gcaggtgccgtcgacggtgc 266
           ||||||||||||||||||||
Sbjct: 117 gcaggtgccgtcgacggtgc 136

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 430   gggagaggatncccatgaccagg 452
             |||||||||| ||||||||||||
Sbjct: 71845 gggagaggattcccatgaccagg 71823

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     tttttgcatgggccaccgca 249
               ||||||||||||||||||||
Sbjct: 1357636 tttttgcatgggccaccgca 1357655

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    tcatgtcggcgcagcggaac 289
              ||||||||||||||||||||
Sbjct: 807692 tcatgtcggcgcagcggaac 807673

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcatgtcggcgcagcggaac 289
            ||||||||||||||||||||
Sbjct: 8347 tcatgtcggcgcagcggaac 8366

>gb|AY734457.1| Danio rerio EXT1c mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  gcaggtgccgtcgacggtgc 266
            ||||||||||||||||||||
Sbjct: 1137 gcaggtgccgtcgacggtgc 1156

>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete
              sequence
          Length = 230634

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 60     cagctttttgtcgagagagaaaacacag 87
              ||||||||||| | ||||||||||||||
Sbjct: 184172 cagctttttgttgggagagaaaacacag 184199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,042,415
Number of Sequences: 3902068
Number of extensions: 3042415
Number of successful extensions: 53447
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53361
Number of HSP's gapped (non-prelim): 82
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)