| Clone Name | rbags27p20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475105.1| Triticum aestivum apomixis-associated protein mRNA, partial cds Length = 435 Score = 462 bits (233), Expect = e-127 Identities = 260/269 (96%) Strand = Plus / Minus Query: 310 tcataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggc 369 ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| Sbjct: 435 tcataggaacacgtcctgctcaagcagcttcaccacctcgccctggctgttgagcttggc 376 Query: 370 cacctcgatgggggtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaa 429 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 375 cacctcgatgggggtcttcccatccagattttggagcgtgacagcagcgccgtgcttcaa 316 Query: 430 aagaagatccacacattccttcctaccgtatccagcggcatagtgcagcggggtgttctt 489 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 315 gagaagatccacgcattccttccgaccgtatccagcggcatagtgcagcggggtgttctt 256 Query: 490 gttcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaa 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gttcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaa 196 Query: 550 ctcgccgtatccacatgcaaaatgtaagg 578 |||||||||||||||||||||||| |||| Sbjct: 195 ctcgccgtatccacatgcaaaatgcaagg 167
>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial cds Length = 710 Score = 260 bits (131), Expect = 5e-66 Identities = 209/235 (88%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 614 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 555 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| Sbjct: 554 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 495 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 || || || ||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 494 gcagcgtaatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcc 435 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 ||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 434 tccagaaggatctctgcgcatttcaactcaccgtaaccacacgcaaaatgtaagg 380
>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full insert sequence Length = 1529 Score = 260 bits (131), Expect = 5e-66 Identities = 209/235 (88%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1190 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1131 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| Sbjct: 1130 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1071 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 || || || ||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1070 gcagcgtaatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcc 1011 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 ||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 1010 tccagaaggatctctgcgcatttcaactcaccgtaaccacacgcaaaatgtaagg 956
>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full insert sequence Length = 1475 Score = 260 bits (131), Expect = 5e-66 Identities = 209/235 (88%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1190 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1131 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| Sbjct: 1130 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1071 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 || || || ||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1070 gcagcgtaatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcc 1011 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 ||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 1010 tccagaaggatctctgcgcatttcaactcaccgtaaccacacgcaaaatgtaagg 956
>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full insert sequence Length = 1418 Score = 260 bits (131), Expect = 5e-66 Identities = 209/235 (88%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1195 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1136 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| Sbjct: 1135 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1076 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 || || || ||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1075 gcagcgtaatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcc 1016 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 ||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||||| Sbjct: 1015 tccagaaggatctctgcgcatttcaactcaccgtaaccacacgcaaaatgtaagg 961
>dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a Length = 876 Score = 244 bits (123), Expect = 3e-61 Identities = 231/267 (86%) Strand = Plus / Minus Query: 312 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 371 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 372 cctcgatgggggtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaa 431 | ||||||||||||||||| |||||||| |||| | |||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 432 gaagatccacacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgt 491 ||||||||||||||||||||| || || ||||| ||||| |||||||| ||||| |||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagcggagtgtttttgt 452 Query: 492 tcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaact 551 |||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||| Sbjct: 451 tcttatccagagcgtcaactgcagcaccagcctccagaaggatttccgcacatttcaact 392 Query: 552 cgccgtatccacatgcaaaatgtaagg 578 |||| || |||||||||||||| |||| Sbjct: 391 cgccatagccacatgcaaaatgcaagg 365
>gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB 3-1a, partial cds Length = 876 Score = 244 bits (123), Expect = 3e-61 Identities = 231/267 (86%) Strand = Plus / Minus Query: 312 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 371 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 372 cctcgatgggggtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaa 431 | ||||||||||||||||| |||||||| |||| | |||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 432 gaagatccacacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgt 491 ||||||||||||||||||||| || || ||||| ||||| |||||||| ||||| |||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagcggagtgtttttgt 452 Query: 492 tcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaact 551 |||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||| Sbjct: 451 tcttatccagagcgtcaactgcagcaccagcctccagaaggatttccgcacatttcaact 392 Query: 552 cgccgtatccacatgcaaaatgtaagg 578 |||| || |||||||||||||| |||| Sbjct: 391 cgccatagccacatgcaaaatgcaagg 365
>emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated mRNA, 876bp Length = 876 Score = 244 bits (123), Expect = 3e-61 Identities = 231/267 (86%) Strand = Plus / Minus Query: 312 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 371 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 372 cctcgatgggggtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaa 431 | ||||||||||||||||| |||||||| |||| | |||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 432 gaagatccacacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgt 491 ||||||||||||||||||||| || || ||||| ||||| |||||||| ||||| |||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagcggagtgtttttgt 452 Query: 492 tcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaact 551 |||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||| Sbjct: 451 tcttatccagagcgtcaactgcagcaccagcctccagaaggatttccgcacatttcaact 392 Query: 552 cgccgtatccacatgcaaaatgtaagg 578 |||| || |||||||||||||| |||| Sbjct: 391 cgccatagccacatgcaaaatgcaagg 365
>gb|AY106235.1| Zea mays PCO066039 mRNA sequence Length = 1360 Score = 232 bits (117), Expect = 1e-57 Identities = 228/265 (86%) Strand = Plus / Minus Query: 312 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 371 ||||||| |||||| ||| |||| ||||| ||||| || || |||||||| ||||| | Sbjct: 1096 ataggaaagcgtccttctctagcaacttgagaacctcatcttgactgttgagtttggcaa 1037 Query: 372 cctcgatgggggtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaa 431 ||||||||||||| |||||||||||||| |||||| |||||||||| || | |||||| | Sbjct: 1036 cctcgatgggggttttcccgtccagattctggagcgtgacagcagcaccatacttcaaca 977 Query: 432 gaagatccacacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgt 491 ||||||||||||||||||||| ||| || ||||| |||||||||| ||| |||||||||| Sbjct: 976 gaagatccacacattccttccgaccatacccagcagcatagtgcaacggagtgttcttgt 917 Query: 492 tcttatccagtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaact 551 ||||||| || || |||||||| || || ||||| || || ||||||||||||||||||| Sbjct: 916 tcttatctagggcatcaactgcggcccccgcctcaaggagaatttctgcacacttcaact 857 Query: 552 cgccgtatccacatgcaaaatgtaa 576 | || || ||||||||||||||||| Sbjct: 856 caccatagccacatgcaaaatgtaa 832
>gb|AY107283.1| Zea mays PCO076711 mRNA sequence Length = 1604 Score = 204 bits (103), Expect = 2e-49 Identities = 202/235 (85%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 |||||||||||| | || |||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1256 acctcgtcctggttattcagcttggcgacatcgataggtgtcttcccgtccaggttttgg 1197 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||||| ||| Sbjct: 1196 agcgttacagcagcaccgtgcttcaaaagaagatccacacactccttgcggccgtagcca 1137 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 || || || |||| |||||||||||||||||| || || ||||| |||||||| || || Sbjct: 1136 gcagcgtaatgcaacggggtgttcttgttcttgtcaagagcgtccactgcagcaccagct 1077 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 || |||||||| | |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1076 tcaagaaggatctgggcacacttcaactcaccgtacccacatgcaaaatgtaagg 1022
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 410 acagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatccagcggca 469 ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||||| || Sbjct: 151736 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 151677 Query: 470 tagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcctccaga 529 || ||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 151676 taatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcctccaga 151617 Query: 530 aggatttctgcacacttcaact 551 ||||| ||||| || ||||||| Sbjct: 151616 aggatctctgcgcatttcaact 151595 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagatt 399 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 151892 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagatt 151837
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 410 acagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatccagcggca 469 ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||||| || Sbjct: 19668661 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 19668602 Query: 470 tagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcctccaga 529 || ||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 19668601 taatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcctccaga 19668542 Query: 530 aggatttctgcacacttcaact 551 ||||| ||||| || ||||||| Sbjct: 19668541 aggatctctgcgcatttcaact 19668520 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagatt 399 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19668817 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagatt 19668762
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 410 acagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatccagcggca 469 ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||||| || Sbjct: 14347 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 14288 Query: 470 tagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcctccaga 529 || ||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 14287 taatgcagtggggtgttcttgttcttatccagtgcgtttacagcagcacctgcctccaga 14228 Query: 530 aggatttctgcacacttcaact 551 ||||| ||||| || ||||||| Sbjct: 14227 aggatctctgcgcatttcaact 14206 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagatt 399 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14503 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagatt 14448
>ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1306 Score = 117 bits (59), Expect = 4e-23 Identities = 191/235 (81%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 |||||||||||| |||||||||| || || || |||| ||||| || |||| |||| | Sbjct: 1015 acctcgtcctggttgttgagcttcgcaacgtcaatggccgtcttgccatccatgttttcg 956 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||| || |||| ||||| ||||||||||| || ||||| |||| || ||| Sbjct: 955 agggtgacagcggctccgttcttcagcagaagatccacgcaccccttcataccatagcca 896 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 ||||| || |||||||| |||||||||||||| |||| || || |||||||| || ||| Sbjct: 895 gcggcgtaatgcagcggagtgttcttgttcttgtccaaagcatccactgcagcacccgcc 836 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 || ||||| | || |||||||||||||| || || ||||||||||| ||||||| Sbjct: 835 tcaagaagtacttgggcacacttcaactccccatacccacatgcaaagtgtaagg 781
>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full insert sequence Length = 1292 Score = 117 bits (59), Expect = 4e-23 Identities = 191/235 (81%) Strand = Plus / Minus Query: 344 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 403 |||||||||||| |||||||||| || || || |||| ||||| || |||| |||| | Sbjct: 1001 acctcgtcctggttgttgagcttcgcaacgtcaatggccgtcttgccatccatgttttcg 942 Query: 404 agcatgacagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatcca 463 || ||||||| || |||| ||||| ||||||||||| || ||||| |||| || ||| Sbjct: 941 agggtgacagcggctccgttcttcagcagaagatccacgcaccccttcataccatagcca 882 Query: 464 gcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcc 523 ||||| || |||||||| |||||||||||||| |||| || || |||||||| || ||| Sbjct: 881 gcggcgtaatgcagcggagtgttcttgttcttgtccaaagcatccactgcagcacccgcc 822 Query: 524 tccagaaggatttctgcacacttcaactcgccgtatccacatgcaaaatgtaagg 578 || ||||| | || |||||||||||||| || || ||||||||||| ||||||| Sbjct: 821 tcaagaagtacttgggcacacttcaactccccatacccacatgcaaagtgtaagg 767
>emb|AJ234569.1|HVU234569 Hordeum vulgare genomic DNA fragment; clone MWG0813.rev Length = 107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 328 ctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtctt 387 |||||||||||||| |||||| ||||||||||||||| | ||||| ||||||| ||||| Sbjct: 72 ctccagcagcttgagcacctcctcctggctgttgagcctcgccacgtcgatggccgtctt 13 Query: 388 cccgtccag 396 ||||||||| Sbjct: 12 cccgtccag 4
>gb|AY107770.1| Zea mays PCO087426 mRNA sequence Length = 1494 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 328 ctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtctt 387 |||||||||||||| || || |||||| |||||||||||||||| |||||||| ||||| Sbjct: 1136 ctccagcagcttgaggacgtcatcctggttgttgagcttggccacgtcgatgggcgtctt 1077 Query: 388 cccgtccag 396 ||||||||| Sbjct: 1076 cccgtccag 1068 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 |||||||| ||||| |||||||||| ||||||||||||||| || | ||||| || || Sbjct: 1009 ccgtatccggcggcgtagtgcagcgcggtgttcttgttcttgtcgacggcgtccaccgcg 950 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 949 gcgccggcctccag 936
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Minus Query: 410 acagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatccagcggca 469 ||||| || |||| ||||| ||||||||||| || ||||| |||| || |||||||| Sbjct: 26979004 acagcggctccgttcttcagcagaagatccacgcaccccttcataccatagccagcggcg 26978945 Query: 470 tagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcctccaga 529 || |||||||| |||||||||||||| |||| || || |||||||| || ||||| ||| Sbjct: 26978944 taatgcagcggagtgttcttgttcttgtccaaagcatccactgcagcacccgcctcaaga 26978885 Query: 530 aggatttctgcacacttcaact 551 || | || ||||||||||||| Sbjct: 26978884 agtacttgggcacacttcaact 26978863
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 75.8 bits (38), Expect = 1e-10 Identities = 116/142 (81%) Strand = Plus / Minus Query: 410 acagcagcgccgtgcttcaaaagaagatccacacattccttcctaccgtatccagcggca 469 ||||| || |||| ||||| ||||||||||| || ||||| |||| || |||||||| Sbjct: 80404 acagcggctccgttcttcagcagaagatccacgcaccccttcataccatagccagcggcg 80345 Query: 470 tagtgcagcggggtgttcttgttcttatccagtgcgtcaactgcagcgcctgcctccaga 529 || |||||||| |||||||||||||| |||| || || |||||||| || ||||| ||| Sbjct: 80344 taatgcagcggagtgttcttgttcttgtccaaagcatccactgcagcacccgcctcaaga 80285 Query: 530 aggatttctgcacacttcaact 551 || | || ||||||||||||| Sbjct: 80284 agtacttgggcacacttcaact 80263
>ref|NM_179168.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.4 mRNA, complete cds Length = 1377 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 830 gcacatttcaactcgccgtatccacaagcaaaatg 796 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1046 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 987 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 986 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 927 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 926 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 877
>ref|NM_179166.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.2 mRNA, complete cds Length = 1522 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 975 gcacatttcaactcgccgtatccacaagcaaaatg 941 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1191 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1132 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1131 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 1072 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 1071 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 1022
>ref|NM_179167.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.3 mRNA, complete cds Length = 1442 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 895 gcacatttcaactcgccgtatccacaagcaaaatg 861 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1111 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1052 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1051 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 992 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 991 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 942
>ref|NM_119710.3| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.1 mRNA, complete cds Length = 1513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 966 gcacatttcaactcgccgtatccacaagcaaaatg 932 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1182 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1123 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1122 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 1063 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 1062 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 1013
>gb|AY081477.1| Arabidopsis thaliana ankyrin repeat-containing protein 2 (At4g35450) mRNA, complete cds Length = 1100 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 800 gcacatttcaactcgccgtatccacaagcaaaatg 766 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1016 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 957 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 956 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 897 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 896 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 847
>gb|AF386982.1|AF386982 Arabidopsis thaliana ankyrin repeat-containing protein 2 (F15J1.20) mRNA, complete cds Length = 1389 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 975 gcacatttcaactcgccgtatccacaagcaaaatg 941 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1191 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1132 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1131 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 1072 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 1071 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 1022
>emb|BX826711.1|CNS0A38X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 850 gcacatttcaactcgccgtatccacaagcaaaatg 816 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1066 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1007 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1006 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 947 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 946 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 897
>gb|AY087377.1| Arabidopsis thaliana clone 34698 mRNA, complete sequence Length = 1344 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 930 gcacatttcaactcgccgtatccacaagcaaaatg 896 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1146 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1087 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1086 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 1027 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 1026 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 977
>gb|U70425.1|ATU70425 Arabidopsis thaliana ankyrin repeat-containing protein 2 (AKR2) mRNA, complete cds Length = 1598 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 1056 gcacatttcaactcgccgtatccacaagcaaaatg 1022 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagctt 366 |||| ||| |||||||| |||||||| ||||||||||||||| Sbjct: 1272 tccttctcaagcagcttcaccacctccagctggctgttgagctt 1229 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 449 ttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 1146 ttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 1103
>gb|AF034387.1|AF034387 Arabidopsis thaliana AFT protein (AFT) mRNA, complete cds Length = 1315 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 539 gcacacttcaactcgccgtatccacatgcaaaatg 573 ||||| |||||||||||||||||||| |||||||| Sbjct: 879 gcacatttcaactcgccgtatccacaagcaaaatg 845 Score = 44.1 bits (22), Expect = 0.50 Identities = 133/170 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1095 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1036 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 |||||| |||| || ||||| || |||| ||||| || | || || ||||| ||| Sbjct: 1035 gtcttctcgtctaggttttgcagagtgactgcagcaccattctccaggagaaggcttaca 976 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 || || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 975 cactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 926
>ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 ||||| || ||||| |||||||||| |||||||||||||| |||| ||||| || || Sbjct: 908 ccgtagccggcggcgtagtgcagcgccgtgttcttgttcttgtccaccgcgtccacggcc 849 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 848 gcgccggcctccag 835 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 332 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 391 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 1031 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 972 Query: 392 tccag 396 ||||| Sbjct: 971 tccag 967
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 ||||| || ||||| |||||||||| |||||||||||||| |||| ||||| || || Sbjct: 35559689 ccgtagccggcggcgtagtgcagcgccgtgttcttgttcttgtccaccgcgtccacggcc 35559630 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 35559629 gcgccggcctccag 35559616 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 332 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 391 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 35559911 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 35559852 Query: 392 tccag 396 ||||| Sbjct: 35559851 tccag 35559847
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 ||||| || ||||| |||||||||| |||||||||||||| |||| ||||| || || Sbjct: 35649761 ccgtagccggcggcgtagtgcagcgccgtgttcttgttcttgtccaccgcgtccacggcc 35649702 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 35649701 gcgccggcctccag 35649688 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 332 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 391 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 35649983 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 35649924 Query: 392 tccag 396 ||||| Sbjct: 35649923 tccag 35649919
>gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein HBP1 mRNA, complete cds Length = 1331 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgttcttatcc 499 ||||| ||||||||||| |||||||| |||||||| || | || ||||| ||||| ||| Sbjct: 1012 acacactccttcctaccatatccagcagcatagtgaagagcagtattcttattcttgtcc 953 Query: 500 agtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaactcgccgtat 559 | || ||||| || || || |||||||| || | |||||||||| |||||| ||| Sbjct: 952 aaggcatcaacctttgccccagcttccagaagaatctgagcacacttcacctcgccatat 893 Query: 560 ccacatgcaaaatg 573 ||||| |||||||| Sbjct: 892 ccacaagcaaaatg 879
>gb|AF510035.1| Nicotiana tabacum ankyrin domain protein (ANK1) mRNA, complete cds Length = 1053 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgttcttatcc 499 ||||| ||||||||||| |||||||| |||||||| || | || ||||| ||||| ||| Sbjct: 923 acacactccttcctaccatatccagcagcatagtgaagagcagtattcttattcttgtcc 864 Query: 500 agtgcgtcaactgcagcgcctgcctccagaaggatttctgcacacttcaactcgccgtat 559 | || ||||| || || || |||||||| || | |||||||||| |||||| ||| Sbjct: 863 aaggcatcaacctttgccccagcttccagaagaatctgagcacacttcacctcgccatat 804 Query: 560 ccacatgcaaaatg 573 ||||| |||||||| Sbjct: 803 ccacaagcaaaatg 790
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 ||||| || ||||| |||||||||| |||||||||||||| |||| ||||| || || Sbjct: 92652 ccgtagccggcggcgtagtgcagcgccgtgttcttgttcttgtccaccgcgtccacggcc 92593 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 92592 gcgccggcctccag 92579 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 332 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 391 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 92874 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 92815 Query: 392 tccag 396 ||||| Sbjct: 92814 tccag 92810
>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full insert sequence Length = 1360 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 455 ccgtatccagcggcatagtgcagcggggtgttcttgttcttatccagtgcgtcaactgca 514 ||||| || ||||| |||||||||| |||||||||||||| |||| ||||| || || Sbjct: 947 ccgtagccggcggcgtagtgcagcgccgtgttcttgttcttgtccaccgcgtccacggcc 888 Query: 515 gcgcctgcctccag 528 ||||| |||||||| Sbjct: 887 gcgccggcctccag 874 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 332 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 391 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 1070 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 1011 Query: 392 tccag 396 ||||| Sbjct: 1010 tccag 1006
>ref|NM_127294.3| Arabidopsis thaliana protein binding / transcription regulator AT2G17390 mRNA, complete cds Length = 1427 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 |||||||||||||||||||||||| Sbjct: 892 ctcgccgtatccacatgcaaaatg 869
>gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303) mRNA sequence Length = 1683 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 |||||||||||||||||||||||| Sbjct: 1132 ctcgccgtatccacatgcaaaatg 1109
>gb|BT024730.1| Arabidopsis thaliana At2g17390 mRNA, complete cds Length = 1035 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 |||||||||||||||||||||||| Sbjct: 795 ctcgccgtatccacatgcaaaatg 772
>emb|BX819895.1|CNS0A8GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 |||||||||||||||||||||||| Sbjct: 892 ctcgccgtatccacatgcaaaatg 869
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 |||||||||||||||||||||||| Sbjct: 57945 ctcgccgtatccacatgcaaaatg 57922
>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence Length = 1379 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgttcttatcc 499 ||||| ||||| ||||| |||||||| |||||||| || | || ||||||||||| ||| Sbjct: 1016 acacactcctttctaccatatccagcagcatagtgaagagcagtattcttgttcttgtcc 957 Query: 500 agtgcgtcaac 510 | ||| ||||| Sbjct: 956 aatgcatcaac 946
>gb|AC120873.7| Mus musculus chromosome 12, clone RP23-283P14, complete sequence Length = 198375 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 cacacaggtaacaggcgagagc 190 |||||||||||||||||||||| Sbjct: 196558 cacacaggtaacaggcgagagc 196579
>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds Length = 1065 Score = 44.1 bits (22), Expect = 0.50 Identities = 139/178 (78%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 382 |||| ||| |||||||| | ||||| | |||| |||| || |||||||| ||||| || Sbjct: 1052 tccttctcaagcagcttcagtacctcatgctggttgttcagtttggccacgtcgatcggt 993 Query: 383 gtcttcccgtccagattttggagcatgacagcagcgccgtgcttcaaaagaagatccaca 442 ||||| || |||| |||||||| |||| ||||| || | || || ||||| | ||| Sbjct: 992 gtcttgccatccatgttttggagagtgactgcagcaccattctccagcagaagtgctaca 933 Query: 443 cattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgttcttatcca 500 || |||||||| || || ||||| ||||| || || | ||||||||||||||||||| Sbjct: 932 cactccttcctgccataaccagctgcataatgaagagcagtgttcttgttcttatcca 875
>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA, complete cds Length = 1050 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcag 477 ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 920 acacactcctttcttccgtatccagcagcatagtgcag 883
>emb|CR974487.10| Mouse DNA sequence from clone RP23-136M7 on chromosome 12, complete sequence Length = 218303 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 cacacaggtaacaggcgagagc 190 |||||||||||||||||||||| Sbjct: 45718 cacacaggtaacaggcgagagc 45697
>dbj|D78001.1|RHMTREY Rhizobium sp. DNA for maltooligosyl trehalose trehalohydrolase, maltooligosyl trehalose synthase, complete cds Length = 4834 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 330 ccagcagcttgaccacctcgtcctgg 355 |||||||||||||| ||||||||||| Sbjct: 2563 ccagcagcttgaccgcctcgtcctgg 2538
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 106148 acacactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 106096 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagctt 366 |||| ||| |||||||| |||||||| ||||||||||||||| Sbjct: 106363 tccttctcaagcagcttcaccacctccagctggctgttgagctt 106320 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 ||||||||||||||| |||||||| Sbjct: 105757 ctcgccgtatccacaagcaaaatg 105734
>emb|AL117390.1|SPAC1805 S.pombe chromosome I cosmid c1805 Length = 36514 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cagattttggagcatgacagc 414 ||||||||||||||||||||| Sbjct: 18462 cagattttggagcatgacagc 18482
>emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J1, partial sequence (ESSA project) Length = 27408 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgcagcggggtgttcttgtt 492 ||||| || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 7797 acacactctttcctcccgtaaccagcagcataatgcagaggtgtgttcttgtt 7745 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 323 tcctgctccagcagcttgaccacctcgtcctggctgttgagctt 366 |||| ||| |||||||| |||||||| ||||||||||||||| Sbjct: 8012 tccttctcaagcagcttcaccacctccagctggctgttgagctt 7969 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 ctcgccgtatccacatgcaaaatg 573 ||||||||||||||| |||||||| Sbjct: 7406 ctcgccgtatccacaagcaaaatg 7383
>gb|AC183297.3| Pan troglodytes BAC clone CH251-300E12 from chromosome 18, complete sequence Length = 173095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 gaacagggttgcacagcagga 121 ||||||||||||||||||||| Sbjct: 140175 gaacagggttgcacagcagga 140155
>gb|AC163887.2| Glomus intraradices clone JGIATSX-5E19, complete sequence Length = 35580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tgttgagcttggccacctcga 377 ||||||||||||||||||||| Sbjct: 26108 tgttgagcttggccacctcga 26088
>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA, complete cds Length = 1047 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 440 acacattccttcctaccgtatccagcggcatagtgca 476 ||||| ||||| || ||||||||||| |||||||||| Sbjct: 917 acacactcctttcttccgtatccagcagcatagtgca 881
>dbj|AP000845.4| Homo sapiens genomic DNA, chromosome 18p clone:RP11-705O1, complete sequences Length = 142000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 gaacagggttgcacagcagga 121 ||||||||||||||||||||| Sbjct: 90834 gaacagggttgcacagcagga 90814
>gb|AY549184.1| Streptomyces sp. I-1525 cytochrome P450 monooxygenase CYP107Z6 (ema5) gene, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ctgctccagcagcttgacca 344 |||||||||||||||||||| Sbjct: 436 ctgctccagcagcttgacca 417
>ref|XM_474534.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 630 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 ctgctccagcagcttgaccacctc 348 |||||||| ||||||||||||||| Sbjct: 27 ctgctccatcagcttgaccacctc 4
>ref|XM_421947.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9430067K14 gene (LOC424092), mRNA Length = 5025 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gcctccagaaggatttctgc 540 |||||||||||||||||||| Sbjct: 4957 gcctccagaaggatttctgc 4938
>gb|AC004914.1| Homo sapiens PAC clone RP5-886O8 from 7, complete sequence Length = 143769 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 aggatttctgcacacttcaa 549 |||||||||||||||||||| Sbjct: 90016 aggatttctgcacacttcaa 89997
>gb|AC005062.1| Homo sapiens BAC clone CTB-95A14 from 7, complete sequence Length = 119927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgcttcaaaagaagatcca 440 |||||||||||||||||||| Sbjct: 3405 gtgcttcaaaagaagatcca 3424
>emb|AL161940.6| Human DNA sequence from clone RP11-459I16 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 98221 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ctgttgagcttggccacctc 375 |||||||||||||||||||| Sbjct: 61072 ctgttgagcttggccacctc 61091
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 atggagatggacaaagaaca 105 |||||||||||||||||||| Sbjct: 109377 atggagatggacaaagaaca 109396
>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16, complete sequence Length = 154397 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 ctgctccagcagcttgaccacctc 348 |||||||| ||||||||||||||| Sbjct: 35670 ctgctccatcagcttgaccacctc 35647
>gb|AC097653.2| Homo sapiens BAC clone RP11-148L24 from 4, complete sequence Length = 145496 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 agagaccagaaacaaggaag 270 |||||||||||||||||||| Sbjct: 68186 agagaccagaaacaaggaag 68205
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 ctgctccagcagcttgaccacctc 348 |||||||| ||||||||||||||| Sbjct: 3926355 ctgctccatcagcttgaccacctc 3926332
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcacagcaggatcaaaccaa 130 |||||||||||||||||||| Sbjct: 2418525 gcacagcaggatcaaaccaa 2418506
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gcttcaaaagaagatccaca 442 |||||||||||||||||||| Sbjct: 146036 gcttcaaaagaagatccaca 146017
>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence Length = 167135 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 atggagatggacaaagaaca 105 |||||||||||||||||||| Sbjct: 3783 atggagatggacaaagaaca 3764
>gb|AC102250.10| Mus musculus chromosome 18, clone RP24-162I6, complete sequence Length = 185297 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 agaaacaaggaagagtttta 277 |||||||||||||||||||| Sbjct: 34377 agaaacaaggaagagtttta 34396
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcacagcaggatcaaaccaa 130 |||||||||||||||||||| Sbjct: 2418469 gcacagcaggatcaaaccaa 2418450
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcacagcaggatcaaaccaa 130 |||||||||||||||||||| Sbjct: 143716 gcacagcaggatcaaaccaa 143697
>emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 220294 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 ttcaaaagaagatccacacattcc 448 ||||||||||| |||||||||||| Sbjct: 106193 ttcaaaagaaggtccacacattcc 106216
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 gcgtcaactgcagcgcctgc 522 |||||||||||||||||||| Sbjct: 4112391 gcgtcaactgcagcgcctgc 4112410
>gb|AC132393.4| Mus musculus BAC clone RP23-386K20 from 1, complete sequence Length = 220050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 acaaggaagagttttaggat 281 |||||||||||||||||||| Sbjct: 137622 acaaggaagagttttaggat 137641 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,588,934 Number of Sequences: 3902068 Number of extensions: 4588934 Number of successful extensions: 83523 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83220 Number of HSP's gapped (non-prelim): 303 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)