ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28e23 |
|---|---|
| Clone Library Name | barley_pub |
>CHLI_SOYBN (P93162) Magnesium-chelatase subunit chlI, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) Length = 421 Score = 159 bits (402), Expect = 3e-39 Identities = 81/102 (79%), Positives = 88/102 (86%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ+KLQ+QITSARS L SVQ+D DL+VKIS+VC+ELNVDGLRGDIVTNR KGR Sbjct: 319 EQEKLQQQITSARSVLSSVQIDQDLKVKISKVCAELNVDGLRGDIVTNRAAKALAALKGR 378 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 D V+ EDIATVIPNCLRHRLRKDPLESIDSGLLV EKFYEVF Sbjct: 379 DNVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTEKFYEVF 420
>CHLI_TOBAC (O22436) Magnesium-chelatase subunit chlI, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) Length = 426 Score = 157 bits (398), Expect = 1e-38 Identities = 80/102 (78%), Positives = 87/102 (85%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ+KLQ QI SAR+ L +V +DHDLRVKIS+VC+ELNVDGLRGDIVTNR KGR Sbjct: 324 EQEKLQNQIDSARNALSAVTIDHDLRVKISKVCAELNVDGLRGDIVTNRAARALAALKGR 383 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 D VT EDIATVIPNCLRHRLRKDPLESIDSG+LVVEKFYEVF Sbjct: 384 DKVTPEDIATVIPNCLRHRLRKDPLESIDSGVLVVEKFYEVF 425
>CHLI_ARATH (P16127) Magnesium-chelatase subunit chlI, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Protein CS/CH-42) Length = 424 Score = 152 bits (384), Expect = 4e-37 Identities = 75/102 (73%), Positives = 88/102 (86%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQDKLQ+QI++AR+NL SVQ+D +L+VKIS+VCSELNVDGLRGDIVTNR KG+ Sbjct: 322 EQDKLQDQISTARANLSSVQIDRELKVKISRVCSELNVDGLRGDIVTNRAAKALAALKGK 381 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 D VT +D+ATVIPNCLRHRLRKDPLESIDSG+LV EKF E+F Sbjct: 382 DRVTPDDVATVIPNCLRHRLRKDPLESIDSGVLVSEKFAEIF 423
>CHLI_MESVI (Q9MUT3) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 360 Score = 126 bits (316), Expect = 3e-29 Identities = 64/109 (58%), Positives = 79/109 (72%) Frame = -3 Query: 459 QDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRD 280 Q+ ++ QI AR NL +VQ+D +LR+K+SQ+CSEL+VDGLRGD+V NR +GRD Sbjct: 254 QEDVKSQIIQARKNLANVQMDRELRIKVSQICSELDVDGLRGDLVINRAAKALAAFEGRD 313 Query: 279 VVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG*IVLEVN 133 V +DI +I CLRHRLRKDPLESIDSG V KFYEVFG +LE N Sbjct: 314 KVLPKDILKIITLCLRHRLRKDPLESIDSGSKVESKFYEVFG--LLEEN 360
>CHLI_NEPOL (Q9TL08) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 355 Score = 123 bits (308), Expect = 3e-28 Identities = 66/102 (64%), Positives = 72/102 (70%) Frame = -3 Query: 459 QDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRD 280 Q L Q+T AR+ L VQ D+ LRVKISQVCSELNVDGLRGDIVTNR +GR Sbjct: 250 QASLTSQLTEARARLRQVQTDYSLRVKISQVCSELNVDGLRGDIVTNRAAKALAALEGRT 309 Query: 279 VVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 V+VEDI +I CLRHRLRKDPLESIDSG V E F VFG Sbjct: 310 SVSVEDIGRIITLCLRHRLRKDPLESIDSGEKVQEVFSIVFG 351
>CHLI_ANAVA (Q44498) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Fragment) Length = 338 Score = 123 bits (308), Expect = 3e-28 Identities = 66/108 (61%), Positives = 78/108 (72%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ LQ++I A+ L V+LD+DLRVKIS+VCSEL+VDGLRGDIVTNR +GR Sbjct: 214 EQTALQKKIVEAQKLLPEVKLDYDLRVKISEVCSELDVDGLRGDIVTNRAAKALTAYEGR 273 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG*IVLE 139 VTV+DI VI CLRHRLRKDPLESIDSG V + F +FG +LE Sbjct: 274 TEVTVDDIRRVITLCLRHRLRKDPLESIDSGYKVEKVFARIFGVELLE 321
>CHLI_ANASP (P58571) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 374 Score = 123 bits (308), Expect = 3e-28 Identities = 66/108 (61%), Positives = 78/108 (72%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ LQ++I A+ L V+LD+DLRVKIS+VCSEL+VDGLRGDIVTNR +GR Sbjct: 250 EQTALQKKIVEAQKLLPEVKLDYDLRVKISEVCSELDVDGLRGDIVTNRAAKALTAYEGR 309 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG*IVLE 139 VTV+DI VI CLRHRLRKDPLESIDSG V + F +FG +LE Sbjct: 310 TEVTVDDIRRVITLCLRHRLRKDPLESIDSGYKVEKVFARIFGVELLE 357
>CHLI_ODOSI (P49469) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 353 Score = 122 bits (307), Expect = 3e-28 Identities = 62/102 (60%), Positives = 78/102 (76%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q +L+++I A+ L +V+LD+DLRVKIS+VCS+L+VDGLRGDIVTNR GR Sbjct: 248 QQQELRDRIVLAQKVLPTVELDYDLRVKISEVCSQLDVDGLRGDIVTNRAAKAHAAYHGR 307 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 D VTVEDIA +I CLRHRLRKDPLE+IDSG V + F E+F Sbjct: 308 DKVTVEDIAKIITLCLRHRLRKDPLETIDSGNKVSKVFNEIF 349
>CHLI_SYNY3 (P51634) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 357 Score = 118 bits (296), Expect = 7e-27 Identities = 61/103 (59%), Positives = 76/103 (73%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ+ LQ +I +A++ L V +D+D RVK+S+VC+EL+VDGLRGDIVTNR +GR Sbjct: 250 EQEALQAKIVNAQNLLPQVTIDYDYRVKVSEVCAELDVDGLRGDIVTNRAAKALAAFEGR 309 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 VTV+DI+ VI CLRHRLRKDPLESIDSG V + F VFG Sbjct: 310 TEVTVDDISRVIVLCLRHRLRKDPLESIDSGSKVEKVFKRVFG 352
>CHLI_CHLVU (P56304) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 354 Score = 118 bits (296), Expect = 7e-27 Identities = 63/102 (61%), Positives = 73/102 (71%) Frame = -3 Query: 459 QDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRD 280 Q +L QI AR+ L +QL++D RVKISQ+CSEL+VDGLRGD+VTNR +GR Sbjct: 251 QAQLGNQILEARNLLPQIQLEYDYRVKISQICSELDVDGLRGDLVTNRASKAIASFEGRT 310 Query: 279 VVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 VT EDI VIP CLRHRLRKDPLESIDSG V + F VFG Sbjct: 311 EVTPEDIFRVIPLCLRHRLRKDPLESIDSGDKVRDIFKRVFG 352
>CHLI_CYAPA (P48101) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 347 Score = 118 bits (295), Expect = 9e-27 Identities = 57/102 (55%), Positives = 77/102 (75%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q+ L+++I +A+ L +VQL+++++VKISQVCSEL+VDGLRGDIVTNR +GR Sbjct: 243 QQEVLRQRIINAQQQLNNVQLNYEIKVKISQVCSELDVDGLRGDIVTNRAAKALAAFEGR 302 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 D VTV+D+ +I CLRHRLRKDPLE IDSG V + F +F Sbjct: 303 DEVTVDDVLRIITLCLRHRLRKDPLEEIDSGQKVEKVFQRIF 344
>CHLI_GUITH (Q39516) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 353 Score = 113 bits (282), Expect = 3e-25 Identities = 54/102 (52%), Positives = 74/102 (72%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q + +++I A+ L +V+LD+DLR++IS++C EL+VDGLRGDIVTNR G+ Sbjct: 248 QQTEFKQRIIQAQKVLPTVELDYDLRIRISKICGELDVDGLRGDIVTNRAAKAHAAFNGK 307 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 VTV+DI VI CLRHRLRKDPLE+IDSG V + F ++F Sbjct: 308 QTVTVDDIKAVITMCLRHRLRKDPLETIDSGSKVQKVFEDIF 349
>CHLI_PORPU (P51394) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 356 Score = 112 bits (281), Expect = 4e-25 Identities = 58/102 (56%), Positives = 72/102 (70%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q KL++QI A+ L ++ +D+DLRVKISQVC EL+VDGLRGDIVTNR G+ Sbjct: 250 DQIKLKQQIADAQLLLSTITIDYDLRVKISQVCGELDVDGLRGDIVTNRAAKAYAAFNGQ 309 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 V DI+ VI CLRHRLRKDPLES+DSG V + F +VF Sbjct: 310 QTVNSSDISKVITLCLRHRLRKDPLESMDSGEKVEKVFNKVF 351
>CHLI_EUGGR (P31205) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 348 Score = 112 bits (279), Expect = 6e-25 Identities = 59/102 (57%), Positives = 73/102 (71%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ+KL E+I +AR L ++ + ++L KISQ+CSELNVDGLRGD+VT+R + R Sbjct: 245 EQNKLMEKIINARKKLKNIIIKYELLEKISQICSELNVDGLRGDMVTSRAAKALVAFEDR 304 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 VT +DI TVI CLRHRLRKDPLESIDSG V E F +VF Sbjct: 305 TEVTPKDIFTVITLCLRHRLRKDPLESIDSGYKVQETFKKVF 346
>CHLI_CHLRE (Q94FT3) Magnesium-chelatase subunit chlI, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) Length = 417 Score = 109 bits (273), Expect = 3e-24 Identities = 58/102 (56%), Positives = 69/102 (67%) Frame = -3 Query: 459 QDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRD 280 Q L ++I AR L ++++D RVKISQ+CS+LNVDG+RGDIVTNR +GR Sbjct: 314 QMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTNRAAKALAAFEGRT 373 Query: 279 VVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 VT EDI VIP CLRHRLRKDPL ID G V E F +VFG Sbjct: 374 EVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFG 415
>CHLI_OLILU (Q32742) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 334 Score = 104 bits (260), Expect = 1e-22 Identities = 54/102 (52%), Positives = 70/102 (68%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q+ L+ +I +A++ + SV + D ++KISQVCSEL+VDGLRGDIVTNR R Sbjct: 232 QQEALKTRIIAAQNLISSVTISDDFKLKISQVCSELDVDGLRGDIVTNRAAKAYAAFNNR 291 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 V + DI VI CLRHRLRKDPLE+IDSG V + F E+F Sbjct: 292 TEVEIGDIEKVITLCLRHRLRKDPLETIDSGDKVQKLFEEIF 333
>CHLI_CYACA (Q9TLX7) Magnesium-chelatase subunit chlI (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 353 Score = 97.8 bits (242), Expect = 1e-20 Identities = 48/101 (47%), Positives = 70/101 (69%) Frame = -3 Query: 459 QDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRD 280 QD+L+E+I +A++ L V++ +L+ IS++C L++DGLRGDIVTNR + R+ Sbjct: 253 QDELREKIINAQNLLPKVEMPRELKFNISKICGILDIDGLRGDIVTNRASKAYAAIQQRN 312 Query: 279 VVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 VV + DI VI +CLRHRLRKDPLE I+SG + + F +F Sbjct: 313 VVEIGDIQKVIVSCLRHRLRKDPLEIIESGEKIQKAFTNIF 353
>BCHI_CHLVI (O50312) Magnesium-chelatase 38 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 346 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/103 (35%), Positives = 60/103 (58%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 +Q KLQ++I +A+ L V +D + I+++C L +DG RG++ R +G Sbjct: 238 QQQKLQKEIVAAQKLLPKVSMDDSVLTDIARLCMALGIDGHRGELTITRTAHAFAALQGD 297 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 VT+E + + CLRHRLRKDPLE++D+G + + +V G Sbjct: 298 TNVTMEHVRKIAGLCLRHRLRKDPLETVDAGEKIDRELAKVLG 340
>BCHI_CHLTE (Q93SW1) Magnesium-chelatase 38 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 392 Score = 73.9 bits (180), Expect = 2e-13 Identities = 36/103 (34%), Positives = 60/103 (58%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ KL+++I +A+ L V +D + I+++C L +DG RG++ R +G Sbjct: 284 EQQKLRKKIVAAQQLLPQVTMDDAVLTDIAKLCMNLGIDGHRGELTITRTAHAYAAWEGD 343 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVFG 154 VT++ + + CLRHRLRKDPLE++D+G + + +V G Sbjct: 344 KKVTMKHVREIAGLCLRHRLRKDPLETVDAGEKIDRELAKVLG 386
>Y911_METJA (Q58321) Magnesium-chelatase subunit chlI homolog| Length = 365 Score = 63.2 bits (152), Expect = 3e-10 Identities = 33/86 (38%), Positives = 46/86 (53%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 EQ+KL+E+I AR L V++ DL IS+VC EL + R DI R GR Sbjct: 239 EQNKLRERIIKARELLNKVEISDDLLEFISKVCIELGIQTNRADITVVRTAKALAAYNGR 298 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLE 205 VT++D+ + L HR+R+ P E Sbjct: 299 TYVTIDDVKEAMELALPHRMRRKPFE 324
>BCHI_ACIRU (Q9WXA9) Magnesium-chelatase 38 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 345 Score = 56.2 bits (134), Expect = 4e-08 Identities = 32/102 (31%), Positives = 50/102 (49%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 ++ L+ Q+ +A L V + + +++C EL DGLRG++ R +G Sbjct: 237 DEAALRRQLVTAMKLLPLVSVPEAILRLAAKLCIELGTDGLRGELTLLRAARAEAALEGD 296 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVVEKFYEVF 157 VVT + V P LRHRLR+DPL+ +G V +F Sbjct: 297 TVVTESHLRAVAPAALRHRLRRDPLDESLAGARVERAMAALF 338
>Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916| Length = 629 Score = 48.5 bits (114), Expect = 8e-06 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = -3 Query: 453 KLQEQITSARSNLGSVQL-DHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRDV 277 +L +I +AR+ + V L D++LR +I+ +C+ +VDG+R D+V R +G Sbjct: 208 ELAHRIAAARATVDDVVLGDNELR-RIAALCAAFDVDGMRADLVVARTAAAHAAWRGVRT 266 Query: 276 VTVEDIATVIPNCLRHRLRKDPLE 205 V +DI L HR R+DP + Sbjct: 267 VEEQDIRAAAELALPHRRRRDPFD 290
>BCHI_RHOCA (P26239) Magnesium-chelatase 38 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 350 Score = 46.6 bits (109), Expect = 3e-05 Identities = 26/86 (30%), Positives = 39/86 (45%) Frame = -3 Query: 450 LQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRDVVT 271 ++ QI AR L V+ + + +C L DGLRG++ R +G V Sbjct: 252 IRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVG 311 Query: 270 VEDIATVIPNCLRHRLRKDPLESIDS 193 + + V L HRLR+DPL+ S Sbjct: 312 RDHLKRVATMALSHRLRRDPLDEAGS 337
>BCHI_RHOS4 (O30819) Magnesium-chelatase 38 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 334 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/90 (28%), Positives = 44/90 (48%) Frame = -3 Query: 462 EQDKLQEQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGR 283 E +L+ +I AR+ L ++ + + + +C L DGLRG++ R +G Sbjct: 232 EDMQLRGRILGARAALPQLKTPNTVLHDCAALCIALGSDGLRGELTLLRAARAQAAFEGA 291 Query: 282 DVVTVEDIATVIPNCLRHRLRKDPLESIDS 193 + V + +V L HRLR+DPL+ S Sbjct: 292 EAVGRSHLRSVATMALSHRLRRDPLDEAGS 321
>LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protein kinase 2 (EC| 2.7.11.1) (Dardarin) Length = 2527 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +1 Query: 262 VLHCHDVPSFQGSQR-LGSPVSDNVSSESIHIQLGTHLGYLNPEIMVE-LHRTEVAPSGC 435 ++H FQ S L + + NV+ I + G HL L E+M + +H EVA SGC Sbjct: 406 LMHSSSKEVFQASANALSTLLEQNVNFRKILLSKGIHLNVL--ELMQKHIHSPEVAESGC 463 Query: 436 DLLLEL 453 +L L Sbjct: 464 KMLNHL 469
>BCHD_RHOCA (P26175) Magnesium-chelatase 60 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 561 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/72 (27%), Positives = 29/72 (40%) Frame = -3 Query: 441 QITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRDVVTVED 262 QI AR L VQ+ + +I + C +L + LR ++ GR V ED Sbjct: 160 QIERARELLPQVQMPAERVSEIVEGCRQLGISSLRAPMLALTAARILTALSGRTRVEAED 219 Query: 261 IATVIPNCLRHR 226 + L HR Sbjct: 220 VLHAAELTLAHR 231
>MANS1_MOUSE (Q9CR33) MANSC domain containing protein 1 precursor| Length = 414 Score = 30.8 bits (68), Expect = 1.8 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +2 Query: 170 NFSTTSKPESIDSSGSLRSRCLKQLGITVAMS-STVTTSLPFKAANALAALLVTMSPLSP 346 N S T KPE + +S S+ ++ LKQ T A +TVT+ LP + +VT Sbjct: 234 NVSATLKPELLLTSISVTAKTLKQKEATTASPVTTVTSKLPGVPGSTSFTPVVTHQAALT 293 Query: 347 STFSSEHT 370 +TF + HT Sbjct: 294 NTFQA-HT 300
>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = +2 Query: 170 NFSTTSKPESIDSSGSLRSRCLKQLGITVAMSSTVTTSLPFKAANALAALLVTMS 334 +FS +PE +DS+ S R + G + +++ T + + A NA+ + +MS Sbjct: 87 DFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMS 141
>BCHD_RHOS4 (O34845) Magnesium-chelatase 60 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 558 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/73 (23%), Positives = 31/73 (42%) Frame = -3 Query: 444 EQITSARSNLGSVQLDHDLRVKISQVCSELNVDGLRGDIVTNRXXXXXXXXKGRDVVTVE 265 E++ +AR+ L +V + +++V ++L + LR + +G VT E Sbjct: 160 ERLAAARARLAAVATPPEAAATLARVAAQLGIASLRAPTLALAAARAQAAWEGHAAVTDE 219 Query: 264 DIATVIPNCLRHR 226 DI HR Sbjct: 220 DIRRAADLVFAHR 232
>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) [Contains: Ubiquinol-cytochrome c reductase 8 kDa protein (Complex III subunit IX)] Length = 274 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/55 (25%), Positives = 30/55 (54%) Frame = +2 Query: 170 NFSTTSKPESIDSSGSLRSRCLKQLGITVAMSSTVTTSLPFKAANALAALLVTMS 334 +FS +PE +DS+ S + + G + +++T T + + A N ++ + +MS Sbjct: 87 DFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMS 141
>AL2SE_RAT (Q6RUG5) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 15 protein homolog (Ica69-related protein) Length = 435 Score = 30.0 bits (66), Expect = 3.1 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = +3 Query: 30 YNEEYSLIKDESPKVTIKVYSRTKSLLPYFVAEKHLPREQSSQRLHRTSQLQASPSRLIR 209 + +E+S + + + T+ P + + +E S TS Q PSRL Sbjct: 320 FEKEFSFLSSLLSPTSSRASECTQECQPACGSPSLMCQEPSLGPGPLTSSSQFLPSRLFD 379 Query: 210 AGLYGADASNSWESQ 254 GL+ A NSW SQ Sbjct: 380 LGLHADGAFNSWASQ 394
>RIR1_ASFB7 (P42491) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 778 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +1 Query: 100 KASCLTLWQRNIYLENNLAKDFIELLNYKQARVD*FERV--FTEPMPQTVGNHSGNVLHC 273 K C + N+Y L+ +FI L Y +D + + +TE + Q + N G++ H Sbjct: 623 KNECFEPFTSNLYTRRTLSGEFIVLNKY---LIDDLKEIDLWTEAIQQQLLNAGGSIQHI 679 Query: 274 HDVPS 288 D+P+ Sbjct: 680 LDIPA 684
>SDC3_CHICK (P26261) Syndecan-3 precursor| Length = 405 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/80 (30%), Positives = 36/80 (45%) Frame = +2 Query: 209 SGSLRSRCLKQLGITVAMSSTVTTSLPFKAANALAALLVTMSPLSPSTFSSEHTWDILTR 388 SGS ++ G+ A+S T TS+P +A L VT+ + F T D Sbjct: 55 SGSGSGYFEQESGLETAVSLTTDTSVPL--PTTVAVLPVTLVQPMATPFELFPTEDTSPE 112 Query: 389 RSWSSCTEPRLLRADVICSW 448 ++ S P++ A VI SW Sbjct: 113 QTTSVLYIPKITEAPVIPSW 132
>FREM1_MOUSE (Q684R7) FRAS1-related extracellular matrix protein 1 precursor| (QBRICK protein) Length = 2191 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/62 (30%), Positives = 27/62 (43%) Frame = +1 Query: 151 LAKDFIELLNYKQARVD*FERVFTEPMPQTVGNHSGNVLHCHDVPSFQGSQRLGSPVSDN 330 L+ D + + K+ E V EP+ Q VG S V CH +P+ G P+ D Sbjct: 48 LSGDHLRVAVPKEKDACRLEVVMNEPVTQRVGKLSPQVFDCHFLPNEVKYVHNGCPILDE 107 Query: 331 VS 336 S Sbjct: 108 DS 109
>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)| Length = 1285 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Frame = -2 Query: 442 ADHIRSEQPRFCAARP*SPG*DIPGVFRA--ECGWTQRRHCH*QGCQGVGCLERKGRRDS 269 A + SE P CA+ P +PG + CG + R C Q C +G + Sbjct: 31 AGTVPSEPPSACASDPCAPGTECQATESGGYTCGPMEPRGCATQPCHHGALCVPQGPDPT 90 Query: 268 GGHCHC 251 G C+C Sbjct: 91 GFRCYC 96
>RIR1_ASFM2 (P26685) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 779 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/63 (25%), Positives = 31/63 (49%) Frame = +1 Query: 100 KASCLTLWQRNIYLENNLAKDFIELLNYKQARVD*FERVFTEPMPQTVGNHSGNVLHCHD 279 K C + N+Y L+ +FI L Y ++ +++E + Q + N G++ H D Sbjct: 624 KNECFEPFTSNLYTRRTLSGEFIILNKYLMDDLEEI-NLWSEDIQQQLLNAGGSIQHILD 682 Query: 280 VPS 288 +P+ Sbjct: 683 IPA 685
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/56 (28%), Positives = 33/56 (58%) Frame = +2 Query: 248 ITVAMSSTVTTSLPFKAANALAALLVTMSPLSPSTFSSEHTWDILTRRSWSSCTEP 415 + ++SS+ ++S+P +++A A+ ++ S + PS+ SS + T S SS + P Sbjct: 10 VDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSP 65
>PSAB_CYACA (Q9TLQ6) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 734 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 241 VGNHSGNVLHCHDVPSFQGSQRLGSPVSDNVSSESIHIQLGTHLGYL 381 +G++ ++L H PS G LG N S S+H QLG L L Sbjct: 297 IGHNIKDILEAHKPPS--GKMGLGHKGLFNTISNSLHFQLGLALACL 341
>V120_SHV21 (Q01055) Capsid assembly protein 63| Length = 899 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -1 Query: 125 CHKVRQEAFCSAVNFYSNLWRFILYQTIFFIV*KTVLPSD 6 CH+++ S V+F SN W+ Y+T ++ + VL SD Sbjct: 342 CHRLQTSVLISNVSFTSNSWKG--YETFISLISQLVLFSD 379
>WRK57_ARATH (Q9C983) Probable WRKY transcription factor 57 (WRKY DNA-binding| protein 57) Length = 287 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +1 Query: 235 QTVGNHSGNVLHCHDVPSFQGSQRLGSPVSDNVSSESIHIQLGTHLGYLNPEIMVELHRT 414 QT+G G +L HD SF L P+ + Y E++ +LHR Sbjct: 204 QTIGFPRGGILTAHDPHSFTSHHHLPPPLPN---------------PYYYQELLHQLHRD 248 Query: 415 EVAPS 429 APS Sbjct: 249 NNAPS 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,764,623 Number of Sequences: 219361 Number of extensions: 1339399 Number of successful extensions: 3929 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3925 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
