| Clone Name | rbags28e23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U26545.1|HVU26545 Hordeum vulgare Mg-chelatase subunit (Xantha-h) mRNA, partial cds Length = 1141 Score = 831 bits (419), Expect = 0.0 Identities = 453/461 (98%), Gaps = 5/461 (1%) Strand = Plus / Minus Query: 8 cgctcggtaacactgttttctatacaatgaagaatatagtttgataaaggatgaatcgcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 cgctcggtaacactgttttctatacaatgaagaatatagtttgataaaggatgaatcgcc 1080 Query: 68 aaaggttactataaaagtttacagccgaacaaaaagcctcctgccttactttgtggcaga 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 aaaggttactataaaagtttacagccgaacaaaaagcctcctgccttactttgtggcaga 1020 Query: 128 gaaacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gaaacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagc 960 Query: 188 aagcccgagtcgattgattcgagcgggtctttacggagccgatgcctc-aaacagttggg 246 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 959 aagcccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaaacag-tggg 901 Query: 247 aatcacagtggcaatgtcctccactgtcacgacgtcccttcctttcaaggcagccaacgc 306 ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 900 aatcacagtggaaatgtcctccactgtcacgacgtccttccctttcaaggcagccaacgc 841 Query: 307 cttggca---gccctgttagtgacaatgtctcctctgagtccatccacattcagctcgga 363 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 cttggcataggccctgttagtgacaatgtctcctctgagtccatccacattcagctcgga 781 Query: 364 acacacctgggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgct 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 acacacctgggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgct 721 Query: 424 ccgagcggatgtgatctgctcctggagcttatcttgctcct 464 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccgagcggatgtgatctgctcctggagcttatcttgctcct 680
>gb|AY109514.1| Zea mays CL865_1 mRNA sequence Length = 1376 Score = 272 bits (137), Expect = 9e-70 Identities = 245/281 (87%) Strand = Plus / Minus Query: 130 aacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagcaa 189 |||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||| || Sbjct: 1286 aacatttacctcaagaacaatctagctaaagacttcataaaacttctcaatgacaagtaa 1227 Query: 190 gcccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaacagttgggaat 249 |||||||| || ||||| ||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1226 acccgagtcaatggattcaagcggatccttgcggagccgatgcctcaagcagtttggaat 1167 Query: 250 cacagtggcaatgtcctccactgtcacgacgtcccttcctttcaaggcagccaacgcctt 309 ||||| |||||||||||||| || ||| ||||||||||||||| ||||||| |||||| Sbjct: 1166 gacagtagcaatgtcctccacggtgacgctgtcccttcctttcaacgcagccagcgcctt 1107 Query: 310 ggcagccctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacacac 369 ||||||||||||||| |||||||| |||||||||||||| || |||| ||| || ||||| Sbjct: 1106 ggcagccctgttagtcacaatgtcacctctgagtccatcaacgttcaactcagagcacac 1047 Query: 370 ctgggatatcttaacccggagatcatggtcgagctgcacag 410 || ||||||||| || ||||| |||||||| | |||||||| Sbjct: 1046 cttggatatcttgacacggaggtcatggtcaatctgcacag 1006
>gb|DQ084026.1| Zea mays magnesium chelatase subunit I precursor (ChlI) gene, ChlI-W22 allele, partial cds Length = 1455 Score = 254 bits (128), Expect = 2e-64 Identities = 266/312 (85%) Strand = Plus / Minus Query: 151 ctagccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgag 210 ||||| |||||||||||| |||||||||| ||||| || |||||||| || ||||| || Sbjct: 1455 ctagctaaagacttcataaaacttctcaatgacaagtaaacccgagtcaatggattcaag 1396 Query: 211 cgggtctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccac 270 ||| || || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 1395 cggatccttgcggagccgatgcctcaagcagtttggaatgacagtagcaatgtcctccac 1336 Query: 271 tgtcacgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaat 330 || ||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 1335 ggtgacgctgtcccttcctttcaacgcagccagcgccttggcagccctgttagtcacaat 1276 Query: 331 gtctcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggag 390 ||| |||||||||||||| || |||| ||| || ||||||| ||||||||| || ||||| Sbjct: 1275 gtcacctctgagtccatcaacgttcaactcagagcacaccttggatatcttgacacggag 1216 Query: 391 atcatggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggag 450 |||||||| | |||||||| || ||||| ||||| || |||| ||||||| |||||| Sbjct: 1215 gtcatggtcaatctgcacagcgccaaggttactccgtgcagatgatatctgctgctggag 1156 Query: 451 cttatcttgctc 462 ||| || ||||| Sbjct: 1155 cttctcctgctc 1144
>gb|DQ084025.1| Zea mays magnesium chelatase subunit I precursor (ChlI) mRNA, ChlI-W22 allele, complete cds Length = 1248 Score = 254 bits (128), Expect = 2e-64 Identities = 266/312 (85%) Strand = Plus / Minus Query: 151 ctagccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgag 210 ||||| |||||||||||| |||||||||| ||||| || |||||||| || ||||| || Sbjct: 1248 ctagctaaagacttcataaaacttctcaatgacaagtaaacccgagtcaatggattcaag 1189 Query: 211 cgggtctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccac 270 ||| || || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 1188 cggatccttgcggagccgatgcctcaagcagtttggaatgacagtagcaatgtcctccac 1129 Query: 271 tgtcacgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaat 330 || ||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 1128 ggtgacgctgtcccttcctttcaacgcagccagcgccttggcagccctgttagtcacaat 1069 Query: 331 gtctcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggag 390 ||| |||||||||||||| || |||| ||| || ||||||| ||||||||| || ||||| Sbjct: 1068 gtcacctctgagtccatcaacgttcaactcagagcacaccttggatatcttgacacggag 1009 Query: 391 atcatggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggag 450 |||||||| | |||||||| || ||||| ||||| || |||| ||||||| |||||| Sbjct: 1008 gtcatggtcaatctgcacagcgccaaggttactccgtgcagatgatatctgctgctggag 949 Query: 451 cttatcttgctc 462 ||| || ||||| Sbjct: 948 cttctcctgctc 937
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 218 bits (110), Expect = 1e-53 Identities = 305/370 (82%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 76103 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 76044 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 76043 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 75984 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 75983 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 75924 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 75923 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 75864 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 75863 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 75804 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 75803 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 75744 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 75743 tcttgttcct 75734
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 218 bits (110), Expect = 1e-53 Identities = 305/370 (82%) Strand = Plus / Plus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 20055910 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 20055969 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 20055970 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 20056029 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 20056030 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 20056089 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 20056090 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 20056149 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 20056150 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 20056209 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 20056210 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 20056269 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 20056270 tcttgttcct 20056279
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 218 bits (110), Expect = 1e-53 Identities = 305/370 (82%) Strand = Plus / Plus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 20048938 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 20048997 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 20048998 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 20049057 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 20049058 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 20049117 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 20049118 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 20049177 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 20049178 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 20049237 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 20049238 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 20049297 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 20049298 tcttgttcct 20049307
>dbj|AK104435.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D12, full insert sequence Length = 1504 Score = 218 bits (110), Expect = 1e-53 Identities = 305/370 (82%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1324 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1265 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1264 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1205 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1204 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1145 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 1144 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 1085 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 1084 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 1025 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1024 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 965 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 964 tcttgttcct 955
>dbj|AK060389.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H01, full insert sequence Length = 1481 Score = 218 bits (110), Expect = 1e-53 Identities = 305/370 (82%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1363 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1304 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1303 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1244 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1243 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1184 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 1183 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 1124 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 1123 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 1064 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1063 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 1004 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 1003 tcttgttcct 994
>ref|XM_462936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1286 Score = 216 bits (109), Expect = 5e-53 Identities = 277/333 (83%) Strand = Plus / Minus Query: 132 catttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagcaagc 191 |||||||||| |||| ||| ||| ||||||||||| ||||||||||| || ||||| | Sbjct: 1267 catttacctccagaataatttaggtgaagacttcataaaacttctcaaccacgagcaatc 1208 Query: 192 ccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaacagttgggaatca 251 | ||||| |||||||| || ||||| || || |||||||||||||| |||||||| || | Sbjct: 1207 ctgagtcaattgattcaagtgggtccttccgaagccgatgcctcaagcagttggggataa 1148 Query: 252 cagtggcaatgtcctccactgtcacgacgtcccttcctttcaaggcagccaacgccttgg 311 |||||||||||||||| || || || |||||| ||||| | || ||||||||||||| Sbjct: 1147 cagtggcaatgtcctctacagtgacagtgtccctgcctttgagtgctgccaacgccttgg 1088 Query: 312 cagccctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacacacct 371 ||||||||||||| |||||||| ||||| | |||||| ||||||| ||| | |||||| | Sbjct: 1087 cagccctgttagtcacaatgtcccctcttaatccatcaacattcaactctgcacacactt 1028 Query: 372 gggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgctccgagcgg 431 || |||||||| || ||||||||||| | |||||||| ||| ||||| |||||||| | Sbjct: 1027 tagaaatcttaacacgaagatcatggtcaatctgcacagcaccaaggttactccgagcag 968 Query: 432 atgtgatctgctcctggagcttatcttgctcct 464 ||| ||||||| ||||||||| ||||| |||| Sbjct: 967 atgaaatctgctgctggagcttgtcttgttcct 935
>dbj|AK071134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K03, full insert sequence Length = 1576 Score = 210 bits (106), Expect = 3e-51 Identities = 304/370 (82%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1346 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1287 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1286 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1227 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1226 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1167 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 1166 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 1107 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 1106 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 1047 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | || ||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1046 tggtcaatcttcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 987 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 986 tcttgttcct 977
>dbj|AK070720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M13, full insert sequence Length = 2111 Score = 210 bits (106), Expect = 3e-51 Identities = 304/370 (82%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1341 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1282 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1281 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1222 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || |||||||||||||| || || || Sbjct: 1221 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcttctacagtg 1162 Query: 275 acgacgtcccttcctttcaaggcagccaacgccttggcagccctgttagtgacaatgtct 334 || |||||| ||||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 1161 acagtgtccctgcctttgagtgctgccaacgccttggcagccctgttagtcacaatgtcc 1102 Query: 335 cctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatca 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || |||||| Sbjct: 1101 cctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatca 1042 Query: 395 tggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctta 454 ||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1041 tggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagcttg 982 Query: 455 tcttgctcct 464 ||||| |||| Sbjct: 981 tcttgttcct 972
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 293 aaggcagccaacgccttggcagccctgttagtgacaatgtctcctctgagtccatccaca 352 ||||| ||||| |||||||| || | |||||||||||||||||| | || || |||||| Sbjct: 1580168 aaggccgccaaggccttggccgcgcggttagtgacaatgtctccccgcaggccgtccaca 1580227 Query: 353 ttcagctcggaacacacctggga 375 | |||||| | |||||| ||||| Sbjct: 1580228 tccagctcagcacacacttggga 1580250
>gb|DQ468113.1| Arthrospira platensis magnesium chelatas ChlI subunit gene, partial cds Length = 1002 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 293 aaggcagccaacgccttggcagccctgttagtgacaatgtctcctctgagtccatccaca 352 |||||||| || ||||| || ||||||||||||||||| ||||| | |||||||| ||| Sbjct: 839 aaggcagctaaagccttcgccgccctgttagtgacaatatctccccgcagtccatctaca 780 Query: 353 t 353 | Sbjct: 779 t 779
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 305 gccttggcagccctgttagtgacaatgtctcc 336 ||||||||||||| ||| |||||||||||||| Sbjct: 122738 gccttggcagcccggttggtgacaatgtctcc 122707
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 189 agcccgagtcgattgattcgagcgggtcttt 219 ||||||||||||| ||||||||||| ||||| Sbjct: 1824801 agcccgagtcgatcgattcgagcggatcttt 1824771
>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds Length = 1953 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 329 atgtctcctctgagtccatccacattcagctcggaacacacct 371 ||||||||||| | |||||||||||||| ||| | |||||||| Sbjct: 1657 atgtctcctcttaatccatccacattcaactcagcacacacct 1615
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 cagttgggaatcacagtggca 259 ||||||||||||||||||||| Sbjct: 172042 cagttgggaatcacagtggca 172022
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 tgatctgctcctggagcttat 455 ||||||||||||||||||||| Sbjct: 382569 tgatctgctcctggagcttat 382589
>ref|NM_209271.1| Eremothecium gossypii ADL178Wp (ADL178W), mRNA Length = 789 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 tgatctgctcctggagcttat 455 ||||||||||||||||||||| Sbjct: 24 tgatctgctcctggagcttat 44
>gb|AC163207.6| Mus musculus chromosome 1, clone RP24-137J11, complete sequence Length = 169102 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gttactataaaagtttacag 91 |||||||||||||||||||| Sbjct: 44071 gttactataaaagtttacag 44090
>gb|AC101831.7| Mus musculus chromosome 15, clone RP24-491D12, complete sequence Length = 129818 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aaaggttactataaaagttt 87 |||||||||||||||||||| Sbjct: 92402 aaaggttactataaaagttt 92421
>gb|BT012789.1| Lycopersicon esculentum clone 113783F, mRNA sequence Length = 1564 Score = 40.1 bits (20), Expect = 6.3 Identities = 65/80 (81%) Strand = Plus / Minus Query: 317 ctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacacacctgggat 376 ||||||||||| || || ||||| | |||||| |||||||| || | ||| |||| || Sbjct: 1160 ctgttagtgactatatcacctctcaatccatcgacattcagttctgcacagaccttagag 1101 Query: 377 atcttaacccggagatcatg 396 || ||||| ||||||||||| Sbjct: 1100 attttaacgcggagatcatg 1081
>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence Length = 177226 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cacattcagctcggaacaca 368 |||||||||||||||||||| Sbjct: 62590 cacattcagctcggaacaca 62609
>emb|AL359173.15| Human DNA sequence from clone RP11-769K12 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 167904 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cttctcaactacaagcaagc 191 |||||||||||||||||||| Sbjct: 144462 cttctcaactacaagcaagc 144443
>gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210896 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttctatacaatgaagaatat 44 |||||||||||||||||||| Sbjct: 1765 ttctatacaatgaagaatat 1784
>gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 202972 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttctatacaatgaagaatat 44 |||||||||||||||||||| Sbjct: 164155 ttctatacaatgaagaatat 164174
>gb|AC159979.5| Mus musculus chromosome 15, clone RP24-262D18, complete sequence Length = 166004 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aaaggttactataaaagttt 87 |||||||||||||||||||| Sbjct: 159830 aaaggttactataaaagttt 159811
>gb|AC105922.5| Homo sapiens BAC clone RP11-548K13 from 2, complete sequence Length = 115915 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttttctatacaatgaagaat 42 |||||||||||||||||||| Sbjct: 83048 ttttctatacaatgaagaat 83067
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 313 agccctgttagtgacaatgtctcctctgagtccatc 348 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 109936 agccctgttggtgactatatctcctctgagaccatc 109971
>emb|BX005392.12| Zebrafish DNA sequence from clone DKEY-117J14 in linkage group 24, complete sequence Length = 178765 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tatacaatgaagaatatagt 47 |||||||||||||||||||| Sbjct: 69925 tatacaatgaagaatatagt 69906
>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence Length = 221317 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 acaatctagccaaagacttc 165 |||||||||||||||||||| Sbjct: 131959 acaatctagccaaagacttc 131940
>emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chromosome 8, complete sequence Length = 183975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cacattcagctcggaacaca 368 |||||||||||||||||||| Sbjct: 172006 cacattcagctcggaacaca 172025
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaatgtcctccactgtcac 276 |||||||||||||||||||| Sbjct: 2797845 gcaatgtcctccactgtcac 2797826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,606,573 Number of Sequences: 3902068 Number of extensions: 3606573 Number of successful extensions: 61095 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60939 Number of HSP's gapped (non-prelim): 146 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)