ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28e19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3 28 5.3

>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3|
          Length = 3497

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 131 ISSRLAKLYRAKLLQSSGVITS--DIVNHRENXGPLLEXSQTALL 3
           I  RLA+  + KL Q    +TS  D ++H  + GP LE ++  LL
Sbjct: 418 ILMRLAEFQKQKLEQLRQFLTSVEDRISHMSDIGPTLEEAEKQLL 462


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,177,184
Number of Sequences: 219361
Number of extensions: 873201
Number of successful extensions: 1134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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