>gb|AY107314.1| Zea mays PCO076491 mRNA sequence
          Length = 1157

 Score =  111 bits (56), Expect = 3e-21
 Identities = 152/184 (82%)
 Strand = Plus / Minus

                                                                       
Query: 414 aatgcttgaacaagacttcgggctgcatgcatctgatccggtgtgccagatatcataaca 473
           ||||||| ||| ||||||||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 625 aatgcttcaacgagacttcgggctgcatgcatctgctctggtgtgccagatatcaaaaca 566

                                                                       
Query: 474 ggtgtatccatggaatcagctagaggttcatcgattgttatcttagctcctgaaaactcg 533
           |  || ||||| | ||| |||  ||| ||| |||  |||||||||||| | |||||||| 
Sbjct: 565 gcagtgtccatcgcatcggctgtaggctcagcgacagttatcttagcttcagaaaactca 506

                                                                       
Query: 534 cgaatcatattcaaacaacctccatcatgcccgcatagggcaggtataattaatcttgga 593
           || ||| | | ||||||||||||||| |  ||||| ||  |||| |||| ||||||||||
Sbjct: 505 cggatcctgtccaaacaacctccatcctcaccgcagagaacagggataactaatcttgga 446

               
Query: 594 acca 597
           ||||
Sbjct: 445 acca 442

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                           
Query: 397     gtggttcacttagaacaaatgcttgaacaagacttcgggctgcatgcatctgatccggtg 456
               ||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct: 7510285 gtggttcacttaggacaaatgcttgaataagacttcgggctgcatgcatctggtctggtg 7510226

                           
Query: 457     tgccagatatca 468
               |||| |||||||
Sbjct: 7510225 tgccggatatca 7510214

>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                         
Query: 397   gtggttcacttagaacaaatgcttgaacaagacttcgggctgcatgcatctgatccggtg 456
             ||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct: 59077 gtggttcacttaggacaaatgcttgaataagacttcgggctgcatgcatctggtctggtg 59018

                         
Query: 457   tgccagatatca 468
             |||| |||||||
Sbjct: 59017 tgccggatatca 59006

>dbj|AK058731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F10, full
            insert sequence
          Length = 1783

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                        
Query: 397  gtggttcacttagaacaaatgcttgaacaagacttcgggctgcatgcatctgatccggtg 456
            ||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct: 1396 gtggttcacttaggacaaatgcttgaataagacttcgggctgcatgcatctggtctggtg 1337

                        
Query: 457  tgccagatatca 468
            |||| |||||||
Sbjct: 1336 tgccggatatca 1325



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 510  gttatcttagctcctgaaaactcgcgaatcatattcaaacaacctccatcatgcccgcat 569
            ||||||||||| ||||||||||| |||||  | || ||||| |||||||| | ||| |||
Sbjct: 1283 gttatcttagcccctgaaaactcacgaattctgtttaaacagcctccatcttccccacat 1224

                                           
Query: 570  agggcaggtataattaatcttggaaccatga 600
            || | ||||| || |||| |||| |||||||
Sbjct: 1223 agagaaggtaaaactaattttgggaccatga 1193

>gb|AE001408.1| Plasmodium falciparum 3D7 chromosome 2 section 45 of 73 of the
            complete sequence
          Length = 12029

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 252  gtgatgaaaattcaaacacagat 274
            |||||||||||||||||||||||
Sbjct: 7111 gtgatgaaaattcaaacacagat 7133

>gb|DQ397638.1| Cenarchaeum symbiosum clone C16E09, complete sequence
          Length = 40387

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 553   ctccatcatgcccgcatagggcagg 577
             ||||| |||||||||||||||||||
Sbjct: 18748 ctccagcatgcccgcatagggcagg 18724

>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence
          Length = 246249

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   aataaaaggagcctagagaa 181
             ||||||||||||||||||||
Sbjct: 80989 aataaaaggagcctagagaa 80970

>gb|AC131707.3| Mus musculus BAC clone RP24-127O2 from chromosome 16, complete sequence
          Length = 174804

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agaagttccaccaatggaat 197
             ||||||||||||||||||||
Sbjct: 11115 agaagttccaccaatggaat 11096

>emb|CR762417.10| Zebrafish DNA sequence from clone DKEY-229E7 in linkage group 5,
             complete sequence
          Length = 78646

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tttgggagattataataaaa 168
             ||||||||||||||||||||
Sbjct: 69708 tttgggagattataataaaa 69689

>emb|AL590085.4| Human DNA sequence from clone RP11-135G16 on chromosome 1 Contains part
             of the XPR1 gene for xenotropic and polytropic retrovirus
             receptor, complete sequence
          Length = 84057

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ttctttgcccagcatgcaaa 306
             ||||||||||||||||||||
Sbjct: 29531 ttctttgcccagcatgcaaa 29512

>gb|AC021032.9| Homo sapiens chromosome 10 clone RP11-180I22, complete sequence
          Length = 160635

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   ttagtctttgctcagcataa 218
             ||||||||||||||||||||
Sbjct: 61986 ttagtctttgctcagcataa 61967

>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence
          Length = 164399

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tttgggagattataataaaa 168
             ||||||||||||||||||||
Sbjct: 14226 tttgggagattataataaaa 14245

>emb|BX284747.1|NCB9B11 Neurospora crassa DNA linkage group II BAC clone B9B11
          Length = 103284

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tgaaaactcgcgaatcatat 543
             ||||||||||||||||||||
Sbjct: 74992 tgaaaactcgcgaatcatat 74973

>gb|AC026367.14| Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 181445

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   aaaattcaaacacagataat 277
             ||||||||||||||||||||
Sbjct: 36694 aaaattcaaacacagataat 36675

>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3
          Length = 247850

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   cttcagagatttgaaactca 388
             ||||||||||||||||||||
Sbjct: 53552 cttcagagatttgaaactca 53571

>gb|AC073596.40| Homo sapiens 12 BAC RP11-385C6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 203395

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  aaaattcaaacacagataat 277
            ||||||||||||||||||||
Sbjct: 8758 aaaattcaaacacagataat 8777

>emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 in linkage group 17,
             complete sequence
          Length = 184290

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   ctttgcccagcatgcaaaca 308
             ||||||||||||||||||||
Sbjct: 86087 ctttgcccagcatgcaaaca 86106

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 137      tgcttccacaactttgggag 156
                ||||||||||||||||||||
Sbjct: 24858195 tgcttccacaactttgggag 24858176

>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence
          Length = 188458

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    tccacaactttgggagattataataaaa 168
              ||||||||| || |||||||||||||||
Sbjct: 115369 tccacaactgtgagagattataataaaa 115396

>gb|AC092834.3| Homo sapiens BAC clone RP13-497K6 from 4, complete sequence
          Length = 146708

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   aaaattcaaacacagataat 277
             ||||||||||||||||||||
Sbjct: 59797 aaaattcaaacacagataat 59778

>dbj|AK099054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149O10, full
            insert sequence
          Length = 1594

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  tgcttccacaactttgggag 156
            ||||||||||||||||||||
Sbjct: 1414 tgcttccacaactttgggag 1433

>dbj|AK059415.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D05, full
            insert sequence
          Length = 1595

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  tgcttccacaactttgggag 156
            ||||||||||||||||||||
Sbjct: 1413 tgcttccacaactttgggag 1432

>dbj|AK058436.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F07, full
           insert sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 tgcttccacaactttgggag 156
           ||||||||||||||||||||
Sbjct: 671 tgcttccacaactttgggag 690

>dbj|AK058610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A09, full
           insert sequence
          Length = 311

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 tgcttccacaactttgggag 156
           ||||||||||||||||||||
Sbjct: 199 tgcttccacaactttgggag 218

>emb|AL928803.6| Mouse DNA sequence from clone RP23-319N14 on chromosome 2, complete
             sequence
          Length = 109092

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   aattttagtctttgctcagc 214
             ||||||||||||||||||||
Sbjct: 57907 aattttagtctttgctcagc 57926

>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tgcttccacaactttgggag 156
              ||||||||||||||||||||
Sbjct: 119911 tgcttccacaactttgggag 119892

>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence
          Length = 207909

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    agaagttccaccaatggaat 197
              ||||||||||||||||||||
Sbjct: 184540 agaagttccaccaatggaat 184521

>gb|AC167717.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16721157J10,
             complete sequence
          Length = 33881

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gggatgcatcaccttcagag 376
             ||||||||||||||||||||
Sbjct: 15928 gggatgcatcaccttcagag 15909

>emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chromosome X, complete
              sequence
          Length = 205749

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    cttcagagatttgaaactca 388
              ||||||||||||||||||||
Sbjct: 117318 cttcagagatttgaaactca 117299

>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete
             sequence
          Length = 179035

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   ccagcatgcaaacagcatca 314
             ||||||||||||||||||||
Sbjct: 97245 ccagcatgcaaacagcatca 97226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,865,914
Number of Sequences: 3902068
Number of extensions: 5865914
Number of successful extensions: 116542
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116430
Number of HSP's gapped (non-prelim): 111
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)