ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27p10 |
|---|---|
| Clone Library Name | barley_pub |
>PFPA_RICCO (Q41140) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 617 Score = 184 bits (467), Expect = 2e-46 Identities = 89/121 (73%), Positives = 106/121 (87%), Gaps = 1/121 (0%) Frame = -2 Query: 610 PATTQIGKPAVHMASVDLRGKAYEMLRQNSSSCLLEDIYRNPGPLQFEGPGADAKPISLC 431 P T IGKPA+H A+VDL+GKAYE+LR N+ L++D+YRNPGPLQFEGPGADAKPI+LC Sbjct: 497 PGATSIGKPAIHPAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFEGPGADAKPITLC 556 Query: 430 VEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVTETLAIMTSSS-TGQPP 254 VEDQDYMGRIKKLQEYL+KV++IVKPGCSQ+VLKAALS M+SVT+ L M+S+S GQ P Sbjct: 557 VEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSSTSLDGQKP 616 Query: 253 L 251 L Sbjct: 617 L 617
>PFPA_SOLTU (P21342) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 616 Score = 166 bits (420), Expect = 5e-41 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = -2 Query: 610 PATTQIGKPAVHMASVDLRGKAYEMLRQNSSSCLLEDIYRNPGPLQFEGPGADAKPISLC 431 P IG PA+H A+VDLRGK+YE+L QN++ LL+D+YRNPGPLQF+GPGADAK SL Sbjct: 497 PGKASIGVPALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGPLQFDGPGADAKAGSLV 556 Query: 430 VEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVTETLAIMTSSSTGQPP 254 VED DY+G IKKLQEYL+KV++IVKPGCSQDVLKAALSAM+SVT+ L++++S S+ P Sbjct: 557 VEDADYIGAIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISSPSSVSTP 615
>PFPB_RICCO (Q41141) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 42.7 bits (99), Expect = 8e-04 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = -2 Query: 589 KPAVHMASVDLRGKAYEMLRQNSSSCLLEDIYRNPGPLQFEGPGADAKPISLCVE 425 KP + A V+L G ++ L++ Y +PGP+QF GPG+DA +L +E Sbjct: 493 KPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLLLE 547
>PFPB_SOLTU (P21343) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 38.5 bits (88), Expect = 0.016 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -2 Query: 589 KPAVHMASVDLRGKAYEMLRQNSSSCLLEDIYRNPGPLQFEGPGADAKPISLCVE 425 KP + A V+L G ++ L + Y NPGP+QF GP A+ +L +E Sbjct: 493 KPVIKKAMVELEGAPFKKFASKREEWALNNRYINPGPIQFVGPVANKVNHTLLLE 547
>CN054_HUMAN (Q8N9W8) Protein C14orf54| Length = 422 Score = 32.7 bits (73), Expect = 0.86 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -2 Query: 403 IKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVTETLAIMTSSSTGQ 260 I+ QE EK+K+I+KPGC QD + SS T++ +T + G+ Sbjct: 297 IRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGK 344
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -2 Query: 490 NPGPLQFE-GPGADAKPI-SLCVEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALS 317 +PGPL P + P S E+Q Y+ ++K+L +Y+E ++ ++ + K LS Sbjct: 506 SPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLS 565 Query: 316 AMSSVTETL 290 M S+ + L Sbjct: 566 KMKSLLDIL 574
>CN054_MACFA (Q95K27) Protein C14orf54 homolog (Fragment)| Length = 346 Score = 32.7 bits (73), Expect = 0.86 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -2 Query: 403 IKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVTETLAIMTSSSTGQ 260 I+ QE EK+K+I+KPGC QD + SS T++ +T + G+ Sbjct: 220 IRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGK 267
>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -2 Query: 490 NPGPLQFE-GPGADAKPI-SLCVEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALS 317 +PGPL P + P S E+Q Y+ ++K+L +Y+E ++ ++ + K LS Sbjct: 505 SPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLS 564 Query: 316 AMSSVTETL 290 M S+ + L Sbjct: 565 KMKSLLDIL 573
>RIM15_YEAST (P43565) Serine/threonine-protein kinase RIM15 (EC 2.7.11.1)| Length = 1770 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 31 SLIQIIQSSTPPKVNPNTLSEPKMIRNKTLPKTRKRIN 144 SL+ I +SSTPP NP + ++R K+L + + N Sbjct: 1066 SLLDISRSSTPPLANPTNSNANNIMRRKSLTENKSFSN 1103
>HYAL2_HUMAN (Q12891) Hyaluronidase-2 precursor (EC 3.2.1.35) (Hyal-2)| (Hyaluronoglucosaminidase-2) (LUCA-2) Length = 473 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 299 RHGRHGTQRRLENILRAPRLHYALHLLQVFL 391 RHGR+ R++ LR R H+A H L V++ Sbjct: 262 RHGRNFVSFRVQEALRVARTHHANHALPVYV 292
>LCBA_NEIME (Q9RGR0) Capsular polysaccharide phosphotransferase lcbA (EC| 2.7.-.-) (Stealth protein lcbA) Length = 366 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/81 (28%), Positives = 43/81 (53%) Frame = +2 Query: 356 LHYALHLLQVFLQFLDPAHVVLILDAQ*NRLGIRTWSFKLEWSRVSVDVF*QTAGRILPQ 535 L+Y+LH ++ FL +++ H+ +I D+Q W E+ VS+ + I Q Sbjct: 105 LYYSLHSVRSFLPWVN--HIYIITDSQ-----TPKWFKSAEYPNVSII---DHSEIIDKQ 154 Query: 536 HLVCFPSQIDASHMHSWLPDL 598 +L F S + +H+H+ +P+L Sbjct: 155 YLPTFNSHVIEAHLHN-IPNL 174
>ENO_PROMA (Q7VDY0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 432 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = -1 Query: 392 AGILGEGEEHSEAWVLAGCSQGGAECHVFRDGDTGY 285 A +L EG A V +G S G E H RDG T Y Sbjct: 28 AEVLLEGGAKGRAIVPSGASTGAYEAHELRDGGTRY 63
>HIS4_NITOC (Q3J6Q2) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 249 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/94 (25%), Positives = 41/94 (43%) Frame = +2 Query: 185 DGAKENRETHNRFITHISA*PSEWGLASGGGSHDSQCLRHGRHGTQRRLENILRAPRLHY 364 DGA + + I HI+ + + GGG DS ++ R I+ ++ Sbjct: 53 DGAFAGQPVNADIIYHIAQALPDMDIQVGGGIRDSDTIQTYLDAGVRYA--IIGTKAINA 110 Query: 365 ALHLLQVFLQFLDPAHVVLILDAQ*NRLGIRTWS 466 + L+F P H++L LDA+ ++ I WS Sbjct: 111 PHFVADACLEF--PGHILLGLDAREGKIAINGWS 142
>DNAK_CHLTA (Q3KLV7) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 660 Score = 29.3 bits (64), Expect = 9.5 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -2 Query: 403 IKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSS 305 +K+++E++EKV+ +K S +KAA +S+ Sbjct: 560 VKEIEEHIEKVRQAIKEDASTTAIKAASDELST 592
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -2 Query: 388 EYLEKVKSIVKPGCSQDVLKAALSAMSSV-TETLAIMTSS 272 E K++++ PG +DVLKAA++A V +E A T++ Sbjct: 1141 EVTTKLRAVAVPGVQEDVLKAAIAAAKHVSSEVTAAATAA 1180
>DNAK_CHLTR (P17821) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) (75 kDa membrane protein) Length = 659 Score = 29.3 bits (64), Expect = 9.5 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -2 Query: 403 IKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSS 305 +K+++E++EKV+ +K S +KAA +S+ Sbjct: 559 VKEIEEHIEKVRQAIKEDASTTAIKAASDELST 591 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,186,180 Number of Sequences: 219361 Number of extensions: 1993042 Number of successful extensions: 5222 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 5053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5221 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
