ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27p10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT019113.1| Zea mays clone Contig720.F mRNA sequence 349 7e-93
2gb|BT024035.1| Zea mays clone EL01N0425C12 mRNA sequence 301 1e-78
3gb|AY103649.1| Zea mays PCO110217 mRNA sequence 301 1e-78
4ref|XM_467453.1| Oryza sativa (japonica cultivar-group), mRNA 299 6e-78
5dbj|AK070279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
7dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
8gb|BT017003.1| Zea mays clone EK07D2310A04.c mRNA sequence 167 5e-38
9gb|AY111144.1| Zea mays CL5972_1 mRNA sequence 167 5e-38
10dbj|AK121116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
11dbj|AK065052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
13dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
14emb|Z32849.1|RCPDPAS R.communis gene for pyrophosphate-dependent... 60 9e-06
15dbj|AP006425.1| Lotus japonicus genomic DNA, chromosome 1, clone... 50 0.009
16ref|XM_481805.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
17ref|XM_507199.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.13
18emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on ch... 46 0.13
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
20dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
21dbj|AK101073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
22dbj|AK099939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
23gb|AC068896.9| Homo sapiens chromosome 10 clone RP11-464O2, comp... 44 0.53
24ref|NM_102181.1| Arabidopsis thaliana carbon-sulfur lyase AT1G23... 42 2.1
25gb|AC004634.1| Homo sapiens chromosome 5, BAC clone 189n23 (LBNL... 42 2.1
26gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Ho... 42 2.1
27emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 42 2.1
28gb|AC091713.4| Papio anubis clone RP41-217F22, complete sequence 42 2.1
29gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana... 42 2.1
30gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence 42 2.1
31gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.3
32gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomi... 40 8.3
33gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, com... 40 8.3
34gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete s... 40 8.3
35emb|Z82206.1|HS370M22 Human DNA sequence from clone RP3-370M22 o... 40 8.3
36emb|AL512443.7| Human DNA sequence from clone RP11-108P2 on chro... 40 8.3
37emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on ch... 40 8.3
38emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chro... 40 8.3
39gb|AC114300.2| Homo sapiens chromosome 5 clone RP11-136H13, comp... 40 8.3
40ref|NM_142604.1| Drosophila melanogaster CG4413-RA (CG4413), mRNA 40 8.3
41gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map... 40 8.3
42gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 ma... 40 8.3
43gb|AY075490.1| Drosophila melanogaster RE41968 full length cDNA 40 8.3
44ref|XM_681166.1| PREDICTED: Danio rerio similar to IMAGE3451454 ... 40 8.3
45gb|AC008143.5|AC008143 Drosophila melanogaster, chromosome 3R, r... 40 8.3
46emb|BX819672.1|CNS0AAEY Arabidopsis thaliana Full-length cDNA Co... 40 8.3
47gb|AC007816.7|AC007816 Drosophila melanogaster, chromosome 3R, r... 40 8.3
48gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66... 40 8.3
49dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.3
50gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.3
51dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.3
52dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.3
53emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on ch... 40 8.3 
>gb|BT019113.1| Zea mays clone Contig720.F mRNA sequence
          Length = 865

 Score =  349 bits (176), Expect = 7e-93
 Identities = 302/344 (87%)
 Strand = Plus / Minus

                                                                       
Query: 260 ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 319
           |||||| ||||| || || ||||||||   ||||||||||||||| ||||||||||| ||
Sbjct: 495 ctggccggtggacgatgaggtcatgatgttcagtgtctccgtcacagaagacatggcgct 436

                                                                       
Query: 320 cagcgccgccttgagaacatcctgcgagcacccaggcttcactatgctcttcaccttctc 379
           |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 435 cagcgccgccttaaggacatcctgcgagcacccaggcttcacaatgctcttcaccttctc 376

                                                                       
Query: 380 caagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacgcacagtga 439
           || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 caggtattcctgcaatttctttatcctgcccatgtagtcttgatcctcgacgcacagtga 316

                                                                       
Query: 440 aataggcttggcatccgcacctggtccttcaaattggagtggtccagggtttctgtagat 499
            |||||||| | ||| ||||||||||||||||| ||||| || || ||||| ||||||| 
Sbjct: 315 gataggctttgaatcggcacctggtccttcaaactggagcggacctgggttcctgtagac 256

                                                                       
Query: 500 gtcttctaacagacagctggacgaattctgcctcaacatctcgtatgctttccctctcaa 559
            ||||| |||| | | ||||| |||||||||||||| |  ||||||||||| ||| ||||
Sbjct: 255 atcttccaacaaaaacctggaagaattctgcctcaatacatcgtatgcttttcctttcaa 196

                                                       
Query: 560 atcgacgctagccatatgcacagctggcttcccgatttgtgtgg 603
            || ||||||||||| || ||||| ||||| |||||||| ||||
Sbjct: 195 gtcaacgctagccatgtgaacagcaggctttccgatttgggtgg 152
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>gb|BT024035.1| Zea mays clone EL01N0425C12 mRNA sequence
          Length = 2016

 Score =  301 bits (152), Expect = 1e-78
 Identities = 285/328 (86%), Gaps = 1/328 (0%)
 Strand = Plus / Minus

                                                                        
Query: 276  gaagtcatgatagccagtgtctccgtcacggaagacatggcactcagcgccgccttgaga 335
            |||||||||||   |||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 1721 gaagtcatgatgttcagtgtttccgtcacagaagacatggcactcagcgccgctttaaga 1662

                                                                        
Query: 336  acatcctgcgagcacccaggcttcactatgctcttcaccttctccaagtattcctgcaat 395
            |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| 
Sbjct: 1661 acatcctgcgagcacccaggcttcacaatcctcttcaccttctccaagtattcctgcaac 1602

                                                                        
Query: 396  ttcttgatcctgcccatgtagtcttgatcctcgacgcacagtgaaataggcttggcatcc 455
            || || || |||||||| |||||||||||||| ||||||| |||||||||||| | ||| 
Sbjct: 1601 ttttttattctgcccatatagtcttgatcctcaacgcacaatgaaataggctttgaatcg 1542

                                                                        
Query: 456  gcacctggtccttcaaattggagtggtccagggtttctgtagatgtcttctaacagacag 515
            ||||||||||||||||| ||||| || || |||||||||||||  ||||| |||| | ||
Sbjct: 1541 gcacctggtccttcaaactggagcgggcctgggtttctgtagacatcttccaacaaaaag 1482

                                                                        
Query: 516  ctggacgaattctgcctcaacatctcgtatgctttccctctcaaatcgacgctagccata 575
            ||||| |||||||| |||||||  ||||||||||| ||| || | || ||||||||||| 
Sbjct: 1481 ctggaagaattctgtctcaacacatcgtatgcttttcctttc-agtcaacgctagccatg 1423

                                        
Query: 576  tgcacagctggcttcccgatttgtgtgg 603
            || ||||| ||||| || ||||| ||||
Sbjct: 1422 tgaacagcgggctttccaatttgggtgg 1395
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>gb|AY103649.1| Zea mays PCO110217 mRNA sequence
          Length = 1532

 Score =  301 bits (152), Expect = 1e-78
 Identities = 284/328 (86%)
 Strand = Plus / Minus

                                                                        
Query: 276  gaagtcatgatagccagtgtctccgtcacggaagacatggcactcagcgccgccttgaga 335
            |||||||||||   |||||| |||||||| ||||||||||||||||||||||| || || 
Sbjct: 1171 gaagtcatgatgttcagtgtttccgtcacagaagacatggcactcagcgccgctttaagg 1112

                                                                        
Query: 336  acatcctgcgagcacccaggcttcactatgctcttcaccttctccaagtattcctgcaat 395
            |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| 
Sbjct: 1111 acatcctgcgagcacccaggcttcacaatcctcttcaccttctccaagtattcctgcaac 1052

                                                                        
Query: 396  ttcttgatcctgcccatgtagtcttgatcctcgacgcacagtgaaataggcttggcatcc 455
            || || || |||||||| |||||||||||||| ||||||| |||||||||||| | ||| 
Sbjct: 1051 ttttttattctgcccatatagtcttgatcctcaacgcacaatgaaataggctttgaatcg 992

                                                                        
Query: 456  gcacctggtccttcaaattggagtggtccagggtttctgtagatgtcttctaacagacag 515
            ||||||||||||||||| ||||| || || ||||| |||||||  ||||| |||| | ||
Sbjct: 991  gcacctggtccttcaaactggagcgggcctgggttcctgtagacatcttccaacaaaaag 932

                                                                        
Query: 516  ctggacgaattctgcctcaacatctcgtatgctttccctctcaaatcgacgctagccata 575
            ||||| |||||||| |||||||  ||||||||||| ||| |||| || ||||||||||| 
Sbjct: 931  ctggaagaattctgtctcaacacatcgtatgcttttcctttcaagtcaacgctagccatg 872

                                        
Query: 576  tgcacagctggcttcccgatttgtgtgg 603
            || ||||| ||||| || ||||| ||||
Sbjct: 871  tgaacagcgggctttccaatttgggtgg 844
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>ref|XM_467453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2187

 Score =  299 bits (151), Expect = 6e-78
 Identities = 292/339 (86%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 319
            |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 1951 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 1892

                                                                        
Query: 320  cagcgccgccttgagaacatcctgcgagcacccaggcttcactatgctcttcaccttctc 379
            |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1891 cagcgctgccttgagaacatcctgcgagcacccaggcttcacgatgcttttcaccttctc 1832

                                                                        
Query: 380  caagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacgcacagtga 439
            |||||||||||| | |||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 1831 caagtattcctggagtttcttgatcctgcccatatagtcttgatcttccacgcacagtga 1772

                                                                        
Query: 440  aataggcttggcatccgcacctggtccttcaaattggagtggtccagggtttctgtagat 499
            ||||||||| | ||| ||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 1771 aataggctttgaatcagcacctgctccttcgaattggagtggtcctgggtttctgtagat 1712

                                                                        
Query: 500  gtcttctaacagacagctggacgaattctgcctcaacatctcgtatgctttccctctcaa 559
            ||| || |  |   ||||||  ||||| | |||||| | |||| ||||||| ||| ||||
Sbjct: 1711 gtcgtcgattaagaagctggtagaattgttcctcaatagctcgaatgctttgcctttcaa 1652

                                                   
Query: 560  atcgacgctagccatatgcacagctggcttcccgatttg 598
             |||||  |||||||||| ||||| || ||||| |||||
Sbjct: 1651 gtcgacagtagccatatggacagcaggtttccctatttg 1613
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>dbj|AK070279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A11, full
            insert sequence
          Length = 2186

 Score =  299 bits (151), Expect = 6e-78
 Identities = 292/339 (86%)
 Strand = Plus / Minus

                                                                        
Query: 260  ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 319
            |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 1950 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 1891

                                                                        
Query: 320  cagcgccgccttgagaacatcctgcgagcacccaggcttcactatgctcttcaccttctc 379
            |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1890 cagcgctgccttgagaacatcctgcgagcacccaggcttcacgatgcttttcaccttctc 1831

                                                                        
Query: 380  caagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacgcacagtga 439
            |||||||||||| | |||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 1830 caagtattcctggagtttcttgatcctgcccatatagtcttgatcttccacgcacagtga 1771

                                                                        
Query: 440  aataggcttggcatccgcacctggtccttcaaattggagtggtccagggtttctgtagat 499
            ||||||||| | ||| ||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 1770 aataggctttgaatcagcacctgctccttcgaattggagtggtcctgggtttctgtagat 1711

                                                                        
Query: 500  gtcttctaacagacagctggacgaattctgcctcaacatctcgtatgctttccctctcaa 559
            ||| || |  |   ||||||  ||||| | |||||| | |||| ||||||| ||| ||||
Sbjct: 1710 gtcgtcgattaagaagctggtagaattgttcctcaatagctcgaatgctttgcctttcaa 1651

                                                   
Query: 560  atcgacgctagccatatgcacagctggcttcccgatttg 598
             |||||  |||||||||| ||||| || ||||| |||||
Sbjct: 1650 gtcgacagtagccatatggacagcaggtttccctatttg 1612
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  172 bits (87), Expect = 9e-40
 Identities = 120/131 (91%)
 Strand = Plus / Plus

                                                                            
Query: 372      accttctccaagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacg 431
                |||||||||||||||||||| | |||||||||||||||||| ||||||||||| || |||
Sbjct: 29623408 accttctccaagtattcctggagtttcttgatcctgcccatatagtcttgatcttccacg 29623467

                                                                            
Query: 432      cacagtgaaataggcttggcatccgcacctggtccttcaaattggagtggtccagggttt 491
                ||||||||||||||||| | ||| ||||||| |||||| |||||||||||||| ||||||
Sbjct: 29623468 cacagtgaaataggctttgaatcagcacctgctccttcgaattggagtggtcctgggttt 29623527

                           
Query: 492      ctgtagatgtc 502
                |||||||||||
Sbjct: 29623528 ctgtagatgtc 29623538



 Score =  127 bits (64), Expect = 5e-26
 Identities = 103/116 (88%)
 Strand = Plus / Plus

                                                                            
Query: 260      ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 319
                |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 29623188 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 29623247

                                                                        
Query: 320      cagcgccgccttgagaacatcctgcgagcacccaggcttcactatgctcttcacct 375
                |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 29623248 cagcgctgccttgagaacatcctgcgagcacccaggcttcacgatgcttttcacct 29623303
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>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1479_B12
          Length = 127089

 Score =  172 bits (87), Expect = 9e-40
 Identities = 120/131 (91%)
 Strand = Plus / Plus

                                                                         
Query: 372   accttctccaagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacg 431
             |||||||||||||||||||| | |||||||||||||||||| ||||||||||| || |||
Sbjct: 81129 accttctccaagtattcctggagtttcttgatcctgcccatatagtcttgatcttccacg 81188

                                                                         
Query: 432   cacagtgaaataggcttggcatccgcacctggtccttcaaattggagtggtccagggttt 491
             ||||||||||||||||| | ||| ||||||| |||||| |||||||||||||| ||||||
Sbjct: 81189 cacagtgaaataggctttgaatcagcacctgctccttcgaattggagtggtcctgggttt 81248

                        
Query: 492   ctgtagatgtc 502
             |||||||||||
Sbjct: 81249 ctgtagatgtc 81259



 Score =  127 bits (64), Expect = 5e-26
 Identities = 103/116 (88%)
 Strand = Plus / Plus

                                                                         
Query: 260   ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 319
             |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 80909 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 80968

                                                                     
Query: 320   cagcgccgccttgagaacatcctgcgagcacccaggcttcactatgctcttcacct 375
             |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 80969 cagcgctgccttgagaacatcctgcgagcacccaggcttcacgatgcttttcacct 81024
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>gb|BT017003.1| Zea mays clone EK07D2310A04.c mRNA sequence
          Length = 515

 Score =  167 bits (84), Expect = 5e-38
 Identities = 213/256 (83%)
 Strand = Plus / Minus

                                                                       
Query: 295 tctccgtcacggaagacatggcactcagcgccgccttgagaacatcctgcgagcacccag 354
           |||||||||| |||| |||||| || | ||| || || || ||||||||||||||||| |
Sbjct: 302 tctccgtcacagaagccatggcgcttaccgctgctttaaggacatcctgcgagcacccgg 243

                                                                       
Query: 355 gcttcactatgctcttcaccttctccaagtattcctgcaatttcttgatcctgcccatgt 414
           ||||||| ||||| |||||||||||||| || |||||||| |||||||| || |||||||
Sbjct: 242 gcttcacaatgcttttcaccttctccaaatactcctgcaacttcttgattcttcccatgt 183

                                                                       
Query: 415 agtcttgatcctcgacgcacagtgaaataggcttggcatccgcacctggtccttcaaatt 474
           | || ||||| || ||||||| |||||||||||| | ||| |||||||  ||||| || |
Sbjct: 182 aatcctgatcttcaacgcacaatgaaataggctttgtatcagcacctgacccttcgaact 123

                                                                       
Query: 475 ggagtggtccagggtttctgtagatgtcttctaacagacagctggacgaattctgcctca 534
           | ||||| |||||||||| |||||||||||| | ||   |||| || ||||| || ||||
Sbjct: 122 gaagtggcccagggtttcggtagatgtcttccatcatgaagctagaagaattttgtctca 63

                           
Query: 535 acatctcgtatgcttt 550
           ||| ||| ||||||||
Sbjct: 62  acaactcatatgcttt 47
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>gb|AY111144.1| Zea mays CL5972_1 mRNA sequence
          Length = 639

 Score =  167 bits (84), Expect = 5e-38
 Identities = 213/256 (83%)
 Strand = Plus / Plus

                                                                       
Query: 295 tctccgtcacggaagacatggcactcagcgccgccttgagaacatcctgcgagcacccag 354
           |||||||||| |||| |||||| || | ||| || || || ||||||||||||||||| |
Sbjct: 238 tctccgtcacagaagccatggcgcttaccgctgctttaaggacatcctgcgagcacccgg 297

                                                                       
Query: 355 gcttcactatgctcttcaccttctccaagtattcctgcaatttcttgatcctgcccatgt 414
           ||||||| ||||| |||||||||||||| || |||||||| |||||||| || |||||||
Sbjct: 298 gcttcacaatgcttttcaccttctccaaatactcctgcaacttcttgattcttcccatgt 357

                                                                       
Query: 415 agtcttgatcctcgacgcacagtgaaataggcttggcatccgcacctggtccttcaaatt 474
           | || ||||| || ||||||| |||||||||||| | ||| |||||||  ||||| || |
Sbjct: 358 aatcctgatcttcaacgcacaatgaaataggctttgtatcagcacctgacccttcgaact 417

                                                                       
Query: 475 ggagtggtccagggtttctgtagatgtcttctaacagacagctggacgaattctgcctca 534
           | ||||| |||||||||| |||||||||||| | ||   |||| || ||||| || ||||
Sbjct: 418 gaagtggcccagggtttcggtagatgtcttccatcatgaagctagaagaattttgtctca 477

                           
Query: 535 acatctcgtatgcttt 550
           ||| ||| ||||||||
Sbjct: 478 acaactcatatgcttt 493
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>dbj|AK121116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073P04, full
            insert sequence
          Length = 2308

 Score =  151 bits (76), Expect = 3e-33
 Identities = 247/304 (81%)
 Strand = Plus / Minus

                                                                        
Query: 295  tctccgtcacggaagacatggcactcagcgccgccttgagaacatcctgcgagcacccag 354
            |||| ||||| || |||||||| || | ||| ||||| || |||||||| ||||| ||||
Sbjct: 1912 tctctgtcacagaggacatggcgcttaacgctgccttcaggacatcctgggagcatccag 1853

                                                                        
Query: 355  gcttcactatgctcttcaccttctccaagtattcctgcaatttcttgatcctgcccatgt 414
            ||||||| || || || ||||||||||| || ||||||||||  |||||||| |||||||
Sbjct: 1852 gcttcacaatacttttgaccttctccaaatactcctgcaattgtttgatcctccccatgt 1793

                                                                        
Query: 415  agtcttgatcctcgacgcacagtgaaataggcttggcatccgcacctggtccttcaaatt 474
            ||||| |||| ||||| |||| |||||| ||||| |  ||  |||||||||| |||||||
Sbjct: 1792 agtctcgatcttcgacacacaatgaaatcggctttgtctctccacctggtccctcaaatt 1733

                                                                        
Query: 475  ggagtggtccagggtttctgtagatgtcttctaacagacagctggacgaattctgcctca 534
            | || || ||||||||||||||||||||||| | ||   ||||||| || || || ||||
Sbjct: 1732 gcagaggaccagggtttctgtagatgtcttccatcaagaagctggaagagttttgtctca 1673

                                                                        
Query: 535  acatctcgtatgctttccctctcaaatcgacgctagccatatgcacagctggcttcccga 594
            ||| ||| |||| ||| ||| | || ||||  || ||||| || ||||| |||||||| |
Sbjct: 1672 acaactcatatggttttccttttaagtcgatactcgccatgtgaacagcaggcttcccaa 1613

                
Query: 595  tttg 598
            ||||
Sbjct: 1612 tttg 1609
to top
>dbj|AK065052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I21, full
            insert sequence
          Length = 2283

 Score =  143 bits (72), Expect = 8e-31
 Identities = 222/272 (81%)
 Strand = Plus / Minus

                                                                        
Query: 327  gccttgagaacatcctgcgagcacccaggcttcactatgctcttcaccttctccaagtat 386
            ||||| || |||||||| ||||| ||||||||||| || || || ||||||||||| || 
Sbjct: 1880 gccttcaggacatcctgggagcatccaggcttcacaatacttttgaccttctccaaatac 1821

                                                                        
Query: 387  tcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacgcacagtgaaataggc 446
            ||||||||||  |||||||| |||||||||||| |||| ||||| |||| |||||| |||
Sbjct: 1820 tcctgcaattgtttgatcctccccatgtagtctcgatcttcgacacacaatgaaatcggc 1761

                                                                        
Query: 447  ttggcatccgcacctggtccttcaaattggagtggtccagggtttctgtagatgtcttct 506
            || |  ||  |||||||||| |||||||| || || ||||||||||||||||||||||| 
Sbjct: 1760 tttgtctctccacctggtccctcaaattgcagaggaccagggtttctgtagatgtcttcc 1701

                                                                        
Query: 507  aacagacagctggacgaattctgcctcaacatctcgtatgctttccctctcaaatcgacg 566
            | ||   ||||||| || || || ||||||| ||| |||| ||| ||| | || ||||  
Sbjct: 1700 atcaagaagctggaagagttttgtctcaacaactcatatggttttccttttaagtcgata 1641

                                            
Query: 567  ctagccatatgcacagctggcttcccgatttg 598
            || ||||| || ||||| |||||||| |||||
Sbjct: 1640 ctcgccatgtgaacagcaggcttcccaatttg 1609
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                            
Query: 371      caccttctccaagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgac 430
                |||||||||||| || ||||||||||  |||||||| |||||||||||| |||| |||||
Sbjct: 12642397 caccttctccaaatactcctgcaattgtttgatcctccccatgtagtctcgatcttcgac 12642338

                                                                            
Query: 431      gcacagtgaaataggcttggcatccgcacctggtccttcaaattggagtggtccagggtt 490
                 |||| |||||| ||||| |  ||  |||||||||| |||||||| || || ||||||||
Sbjct: 12642337 acacaatgaaatcggctttgtctctccacctggtccctcaaattgcagaggaccagggtt 12642278

                               
Query: 491      tctgtagatgtcttc 505
                |||||||||||||||
Sbjct: 12642277 tctgtagatgtcttc 12642263
to top
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0652D10
          Length = 156744

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                          
Query: 371    caccttctccaagtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgac 430
              |||||||||||| || ||||||||||  |||||||| |||||||||||| |||| |||||
Sbjct: 124710 caccttctccaaatactcctgcaattgtttgatcctccccatgtagtctcgatcttcgac 124651

                                                                          
Query: 431    gcacagtgaaataggcttggcatccgcacctggtccttcaaattggagtggtccagggtt 490
               |||| |||||| ||||| |  ||  |||||||||| |||||||| || || ||||||||
Sbjct: 124650 acacaatgaaatcggctttgtctctccacctggtccctcaaattgcagaggaccagggtt 124591

                             
Query: 491    tctgtagatgtcttc 505
              |||||||||||||||
Sbjct: 124590 tctgtagatgtcttc 124576
to top
>emb|Z32849.1|RCPDPAS R.communis gene for pyrophosphate-dependent phosphofructokinase alpha
            subunit
          Length = 6444

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                        
Query: 383  gtattcctgcaatttcttgatcctgcccatgtagtcttgatcctcgacgcacagtgaaat 442
            ||||||||||||||||||||||| ||||||||| || || || || || || || |  ||
Sbjct: 5613 gtattcctgcaatttcttgatccggcccatgtaatcctggtcttcaacacagagagttat 5554

                                                                  
Query: 443  aggcttggcatccgcacctggtccttcaaattggagtggtccagggtttctgta 496
             ||||| ||||| ||||| || ||||||||||| || || || || ||||||||
Sbjct: 5553 tggcttagcatcagcaccaggaccttcaaattgaaggggacctggatttctgta 5500
to top
>dbj|AP006425.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39B10, TM0315,
            complete sequence
          Length = 121336

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 441  ataggcttggcatccgcacctggtccttcaaattggagtggtccagggtttct 493
            ||||| |||||||| ||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 6375 ataggtttggcatcagcaccaggaccttcaaattgaagtggaccaggatttct 6323
to top
>ref|XM_481805.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2089

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 323  cgccgccttgagaacatcctgcgagcacccaggcttcac 361
            ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 1831 cgccgccttcagaacctcccgcgagcatccaggcttcac 1793
to top
>ref|XM_507199.1| PREDICTED Oryza sativa (japonica cultivar-group), P0410E11.122 mRNA
          Length = 2563

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 323  cgccgccttgagaacatcctgcgagcacccaggcttcac 361
            ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 2137 cgccgccttcagaacctcccgcgagcatccaggcttcac 2099
to top
>emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on chromosome 1 Contains STSs
              and GSSs, complete sequence
          Length = 130715

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    tgggggctggccagtggaggagg 276
              |||||||||||||||||||||||
Sbjct: 117096 tgggggctggccagtggaggagg 117118
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 323      cgccgccttgagaacatcctgcgagcacccaggcttcac 361
                ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 15656199 cgccgccttcagaacctcccgcgagcatccaggcttcac 15656161
to top
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0410E11
          Length = 150200

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 323   cgccgccttgagaacatcctgcgagcacccaggcttcac 361
             ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 90354 cgccgccttcagaacctcccgcgagcatccaggcttcac 90316
to top
>dbj|AK101073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A16, full
            insert sequence
          Length = 2089

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 323  cgccgccttgagaacatcctgcgagcacccaggcttcac 361
            ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 1831 cgccgccttcagaacctcccgcgagcatccaggcttcac 1793
to top
>dbj|AK099939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120L01, full
            insert sequence
          Length = 2563

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 323  cgccgccttgagaacatcctgcgagcacccaggcttcac 361
            ||||||||| ||||| ||| ||||||| |||||||||||
Sbjct: 2137 cgccgccttcagaacctcccgcgagcatccaggcttcac 2099
to top
>gb|AC068896.9| Homo sapiens chromosome 10 clone RP11-464O2, complete sequence
          Length = 194905

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 120    cccaaaaactaggaaaagaata 141
              ||||||||||||||||||||||
Sbjct: 165852 cccaaaaactaggaaaagaata 165831
to top
>ref|NM_102181.1| Arabidopsis thaliana carbon-sulfur lyase AT1G23320 mRNA, complete
           cds
          Length = 1167

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 tatgctcttcaccttctccaa 382
           |||||||||||||||||||||
Sbjct: 627 tatgctcttcaccttctccaa 647
to top
>gb|AC004634.1| Homo sapiens chromosome 5, BAC clone 189n23 (LBNL H168), complete
             sequence
          Length = 45687

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 115   actctcccaaaaactaggaaaagaataaa 143
             ||||||||||||| |||||||||||||||
Sbjct: 34705 actctcccaaaaa-taggaaaagaataaa 34678
to top
>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 245907

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 123    aaaaactaggaaaagaataaa 143
              |||||||||||||||||||||
Sbjct: 115224 aaaaactaggaaaagaataaa 115244
to top
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     acagtttgatccaaattattc 49
              |||||||||||||||||||||
Sbjct: 106727 acagtttgatccaaattattc 106707
to top
>gb|AC091713.4| Papio anubis clone RP41-217F22, complete sequence
          Length = 215961

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 585    ggcttcccgatttgtgtggttgcag 609
              ||||||||||||||| |||||||||
Sbjct: 170801 ggcttcccgatttgtctggttgcag 170777
to top
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   tatgctcttcaccttctccaa 382
             |||||||||||||||||||||
Sbjct: 50650 tatgctcttcaccttctccaa 50630
to top
>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence
          Length = 166987

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 585   ggcttcccgatttgtgtggttgcag 609
             ||||||||||||||| |||||||||
Sbjct: 37671 ggcttcccgatttgtctggttgcag 37647
to top
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     agtggaggaggaagtcatga 285
               ||||||||||||||||||||
Sbjct: 1104659 agtggaggaggaagtcatga 1104640
to top
>gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomic sequence, complete
             sequence
          Length = 77821

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   tattcctgcaatttcttgat 403
             ||||||||||||||||||||
Sbjct: 52481 tattcctgcaatttcttgat 52462
to top
>gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, complete sequence
          Length = 243323

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 122    caaaaactaggaaaagaataaaccatgg 149
              ||||||||| ||||||||||||| ||||
Sbjct: 139920 caaaaactatgaaaagaataaactatgg 139947
to top
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence
          Length = 157296

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    acagtttgatccaaattatt 48
             ||||||||||||||||||||
Sbjct: 85777 acagtttgatccaaattatt 85796
to top
>emb|Z82206.1|HS370M22 Human DNA sequence from clone RP3-370M22 on chromosome 22, complete
             sequence
          Length = 143747

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   ggatcacaatatcactgtct 168
             ||||||||||||||||||||
Sbjct: 70897 ggatcacaatatcactgtct 70878
to top
>emb|AL512443.7| Human DNA sequence from clone RP11-108P2 on chromosome 1 Contains part
             of a novel gene and the ZNF265 gene for zinc finger
             protein 265, complete sequence
          Length = 55613

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   aaaactaggaaaagaataaa 143
             ||||||||||||||||||||
Sbjct: 36784 aaaactaggaaaagaataaa 36765
to top
>emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on chromosome 9, complete
             sequence
          Length = 108785

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    ccaaaaatgatacgtaataa 113
             ||||||||||||||||||||
Sbjct: 47320 ccaaaaatgatacgtaataa 47339
to top
>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
              complete sequence
          Length = 159620

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gacagtttgatccaaattat 47
              ||||||||||||||||||||
Sbjct: 113584 gacagtttgatccaaattat 113565
to top
>gb|AC114300.2| Homo sapiens chromosome 5 clone RP11-136H13, complete sequence
          Length = 151166

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaactaggaaaagaataaac 144
              ||||||||||||||||||||
Sbjct: 117188 aaactaggaaaagaataaac 117169
to top
>ref|NM_142604.1| Drosophila melanogaster CG4413-RA (CG4413), mRNA
          Length = 1519

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  atcgggaaacgcataataga 220
            ||||||||||||||||||||
Sbjct: 1298 atcgggaaacgcataataga 1317
to top
>gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map mi398, complete
             sequence
          Length = 84544

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   cataacccacataagtgctt 242
             ||||||||||||||||||||
Sbjct: 80999 cataacccacataagtgctt 81018
to top
>gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 map mi398, complete
              sequence
          Length = 114418

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    cataacccacataagtgctt 242
              ||||||||||||||||||||
Sbjct: 112526 cataacccacataagtgctt 112507
to top
>gb|AY075490.1| Drosophila melanogaster RE41968 full length cDNA
          Length = 1534

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  atcgggaaacgcataataga 220
            ||||||||||||||||||||
Sbjct: 1297 atcgggaaacgcataataga 1316
to top
>ref|XM_681166.1| PREDICTED: Danio rerio similar to IMAGE3451454 protein (LOC558002),
           mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 289 ccagtgtctccgtcacggaagaca 312
           ||||||| ||||||||||||||||
Sbjct: 254 ccagtgtttccgtcacggaagaca 231
to top
>gb|AC008143.5|AC008143 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone
            BACR33G16, complete sequence
          Length = 134371

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  atcgggaaacgcataataga 220
            ||||||||||||||||||||
Sbjct: 6063 atcgggaaacgcataataga 6044
to top
>emb|BX819672.1|CNS0AAEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS15ZC11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1540

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  ataaaccatgggatcacaat 158
            ||||||||||||||||||||
Sbjct: 1495 ataaaccatgggatcacaat 1476
to top
>gb|AC007816.7|AC007816 Drosophila melanogaster, chromosome 3R, region 92B-92C, BAC clone
             BACR10H14, complete sequence
          Length = 155102

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   atcgggaaacgcataataga 220
             ||||||||||||||||||||
Sbjct: 99825 atcgggaaacgcataataga 99806
to top
>gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66 of 118 of the complete
              sequence
          Length = 232094

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    atcgggaaacgcataataga 220
              ||||||||||||||||||||
Sbjct: 191790 atcgggaaacgcataataga 191771
to top
>dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-382M14, complete
             sequences
          Length = 190462

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    gacagtttgatccaaattat 47
             ||||||||||||||||||||
Sbjct: 40867 gacagtttgatccaaattat 40848
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 366     ctcttcaccttctccaagtattcctgcaattt 397
               |||||| |||| |||||||| |||||||||||
Sbjct: 3900695 ctcttcgccttttccaagtactcctgcaattt 3900726
to top
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete
             sequence
          Length = 102488

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 385   attcctgcaatttcttgatcctgc 408
             |||||||||||| |||||||||||
Sbjct: 94184 attcctgcaattccttgatcctgc 94161
to top
>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete
             sequence
          Length = 146000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 385   attcctgcaatttcttgatcctgc 408
             |||||||||||| |||||||||||
Sbjct: 15790 attcctgcaattccttgatcctgc 15767
to top
>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete
             sequence
          Length = 186276

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   gccagtggaggaggaagtca 282
             ||||||||||||||||||||
Sbjct: 28703 gccagtggaggaggaagtca 28684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,473,441
Number of Sequences: 3902068
Number of extensions: 5473441
Number of successful extensions: 125438
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 125215
Number of HSP's gapped (non-prelim): 219
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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