>PDIA6_MEDSA (P38661) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1) (P5)
          Length = 364

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 45/77 (58%), Positives = 60/77 (77%)
 Frame = -2

Query: 528 DDKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSIS 349
           D+++K + ++IE E  KL G A ++GKIY+ V+KK L+KGSDY K E +RL RLLEKSIS
Sbjct: 287 DEEKKAVFARIEEEVKKLEGSASRYGKIYLKVSKKYLEKGSDYAKNEIQRLERLLEKSIS 346

Query: 348 PSKADEFAIKKNILSAF 298
           P+KADE  +KKNILS +
Sbjct: 347 PAKADELTLKKNILSTY 363

>PDIA6_ARATH (O22263) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1) (P5)
          Length = 361

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 42/77 (54%), Positives = 59/77 (76%)
 Frame = -2

Query: 528 DDKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSIS 349
           +D++K +LS+IE EA+ L G   ++GK+Y+ +AK  ++KGSDY  KETERL R+L KSIS
Sbjct: 281 EDEKKAVLSRIEEEASTLKGSTTRYGKLYLKLAKSYIEKGSDYASKETERLGRVLGKSIS 340

Query: 348 PSKADEFAIKKNILSAF 298
           P KADE  +K+NIL+ F
Sbjct: 341 PVKADELTLKRNILTTF 357

>ERP29_MOUSE (P57759) Endoplasmic reticulum protein ERp29 precursor|
          Length = 262

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = -2

Query: 525 DKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSISP 346
           + R+ IL + +     +     K    Y+ +  KIL +G D+   E  R+ +L+E  +S 
Sbjct: 177 EARQAILKQGQDGLLSVKETEKKWASQYLKIMGKILDQGEDFPASEMARIGKLIENKMSD 236

Query: 345 SKADEFAIKKNILSAF 298
           SK +E     NIL+AF
Sbjct: 237 SKKEELQKSLNILTAF 252

>ERP29_RAT (P52555) Endoplasmic reticulum protein ERp29 precursor (ERp31)|
          Length = 260

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = -2

Query: 525 DKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSISP 346
           + R+ IL + +   + +     K    Y+ +  KIL +G D+   E  R+ +L+E  +S 
Sbjct: 175 EARQAILKQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELARISKLIENKMSE 234

Query: 345 SKADEFAIKKNILSAF 298
            K +E     NIL+AF
Sbjct: 235 GKKEELQRSLNILTAF 250

>ERP29_HUMAN (P30040) Endoplasmic reticulum protein ERp29 precursor (ERp31)|
           (ERp28)
          Length = 261

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -2

Query: 525 DKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKS-IS 349
           + R+ +L + +   + +     K  + Y+ +  KIL +G D+   E  R+ RL+EK+ +S
Sbjct: 175 EARQALLKQGQDNLSSVKETQKKWAEQYLKIMGKILDQGEDFPASEMTRIARLIEKNKMS 234

Query: 348 PSKADEFAIKKNILSAF 298
             K +E     NIL+AF
Sbjct: 235 DGKKEELQKSLNILTAF 251

>ERP38_NEUCR (Q92249) Protein disulfide-isomerase erp38 precursor (EC 5.3.4.1)|
           (ERp38)
          Length = 369

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = -2

Query: 543 STVPLDDKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLL 364
           S   + ++ KE +  ++  A       +K+   Y+ V  K L K   Y  KE  RL  +L
Sbjct: 282 SLAEVAEEAKEAVKSLKNSAE------LKYADYYLRVLDK-LSKSEGYATKEFARLEGIL 334

Query: 363 EKS-ISPSKADEFAIKKNILSAF 298
           +K  ++P+K DE  +K N+L  F
Sbjct: 335 KKGGLAPAKVDELTVKVNVLRKF 357

>TIGA_ASPNG (Q00216) Protein disulfide-isomerase tigA precursor (EC 5.3.4.1)|
          Length = 359

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 459 KHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSIS-PSKADEFAIKKNILSAF 298
           K+ + YV VA K L + ++Y  KE  RL ++L K  S P K D+   + NIL  F
Sbjct: 295 KYAQYYVKVADK-LSQNAEYAAKELARLEKILAKGGSAPEKVDDLISRSNILRKF 348

>PDI2_SCHPO (O13811) Protein disulfide-isomerase C17H9.14c precursor (EC|
           5.3.4.1)
          Length = 359

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -2

Query: 519 RKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLL-EKSISPS 343
           ++ +L K++  A + S    K+   Y  V +KIL    ++  KE +RL +LL +KSI+ +
Sbjct: 284 KEVVLEKVKQLALEDSSRWTKY---YKKVFEKILND-ENWVHKEAKRLSKLLRQKSIALA 339

Query: 342 KADEFAIKKNILSAF 298
            AD+F  + NIL++F
Sbjct: 340 SADDFKTRLNILNSF 354

>ERP29_CHICK (P81628) Endoplasmic reticulum protein ERp29 (Fragment)|
          Length = 228

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -2

Query: 522 KRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKS 355
           +R+ +L K +    K      K  + Y+ +  KIL++G ++   E  R+ +L+EK+
Sbjct: 167 ERQSLLKKGQQSLEKAKETEKKSAEQYLKIMSKILEQGEEFAANEVVRITKLIEKT 222

>ZN544_HUMAN (Q6NX49) Zinc finger protein 544|
          Length = 715

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = -1

Query: 439 ERCKEDIAEGL*LYKEGN*EAPSLV-GEVDQSFQSR*IRHQEEHSFSFLLL 290
           +R +E+++  + +Y+ G  E PSLV G+V    QS  +R  +E+S  F++L
Sbjct: 97  DRAREELSHHVEVYRSGPEEPPSLVLGKVQD--QSNQLREHQENSLRFMVL 145

>SYA_EHRRW (Q5HC27) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 887

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 546 ISTVPLDDKRKEILSKIEXEAAKLSGPAVKHGKIYV 439
           +S+VP+D  RK I+ ++  +   L    V H KIYV
Sbjct: 791 LSSVPIDVVRKFIMKRLVKDMIMLFSNVVNHNKIYV 826

>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
          Length = 423

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
 Frame = +1

Query: 259 GRAGARGSSPLRGES*KNVLLDGEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYL-LCN 435
           G  GA G   +RG   KN++L    +G  R DR+     + +   +    A   Y+    
Sbjct: 83  GIGGAGGGPSVRGGMKKNLVLRDRVLGVDRVDRMFGAPADSMWSDVSTAAAPHSYVEAIR 142

Query: 436 VHIDLSVLDSRTTELCSLLFNFREDFLPLVIKRHC 540
             +D S  D  T  +C    N  +   P     HC
Sbjct: 143 TGLDASAQDQATPPVCGPSQNLPQ-LCPYAANGHC 176

>PRIA_CHLTR (O84783) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 753

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 420 LQKGSDYTKKETERLHRLLEKSI 352
           L K SDYT KET+R+H L+++++
Sbjct: 666 LGKCSDYTLKETQRVHTLIKQNL 688

>Y100_METJA (Q57564) Hypothetical protein MJ0100|
          Length = 509

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = +1

Query: 298 ES*KNVLLDGEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYLLCNVHIDLSVLDSRTTE 477
           E+ K  +LDG+F+   R D L +   +P+   + +V+ +L       H ++S++     E
Sbjct: 355 ETLKQWILDGKFLLTERVDTLGRAENKPMKSPITLVKDILSKPPITAHSNISIM-----E 409

Query: 478 LCSLLFNFREDFLPLV 525
              +L     + LP+V
Sbjct: 410 AAKILIKHNINHLPIV 425

>TIG_PHOLL (Q7N0L2) Trigger factor (TF)|
          Length = 434

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
 Frame = -2

Query: 540 TVPLDDKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKK------ILQKGSDYTKKETER 379
           TVP  D  K + S++   A K+     + GK+ +NV K+      I    SD  ++    
Sbjct: 18  TVPAADVEKAVSSELVNVAKKVRIDGFRKGKVPMNVVKQRYGASVIQDVLSDLMQRNF-- 75

Query: 378 LHRLLEKSISPSKADEFA 325
           ++ ++E+ I+P+ A  +A
Sbjct: 76  INAIIEQKINPAGAPSYA 93

>DGK2_DROME (Q09103) Eye-specific diacylglycerol kinase (EC 2.7.1.107) (Retinal|
           degeneration A protein) (Diglyceride kinase 2) (DGK 2)
           (DAG kinase 2)
          Length = 1457

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 SVLPKPMNSPSRRTFFQLSPLNGDDPRAPALPL 255
           ++LP    +P   TF  LSP NGD P  P LPL
Sbjct: 331 TLLPPQPTTPCGITF-TLSPTNGDYPSPPHLPL 362

>SYS_BORGA (Q662D8) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -2

Query: 537 VPLDDKRKEILSKIEXEAAKLSGPAVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEK 358
           V LDDKRK+I+++I    AK +  + K  +   NV K  L +     KK+   L   L+K
Sbjct: 31  VYLDDKRKKIITQIGELNAKRNENSSKMRENLDNVFKSSLMETGKILKKQLIDLEEELKK 90

>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)|
          Length = 319

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = -3

Query: 401 IQRRKLRGSIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPALPLGCSQ*CNSHLP 222
           +Q+++  G    +  +   P+P   PS++ + QL P     P  P LP    Q   S  P
Sbjct: 45  VQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFPPQLPYPQPQ---SFPP 101

Query: 221 QERSEERQKE 192
           Q+   ++Q +
Sbjct: 102 QQPYPQQQPQ 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,961,798
Number of Sequences: 219361
Number of extensions: 1429009
Number of successful extensions: 4706
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4706
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)