>gb|AY112405.1| Zea mays CL10251_1 mRNA sequence
          Length = 565

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 254 tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
           ||||||||| || |||| ||||||||||||||| || ||||||||||| |||||||| ||
Sbjct: 398 tcatctgtatttacctagctccattttcttcttgagtgccttctgtccgtggtatataaa 457

                  
Query: 314 cgagtcg 320
           |||||||
Sbjct: 458 cgagtcg 464



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 205 cctccttacaagccacaaaacttggaaa 232
           |||||||||| |||||||||||||||||
Sbjct: 341 cctccttacatgccacaaaacttggaaa 368

>ref|XM_475457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 1155 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1096

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 1095 cgagtc 1090

>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 9798 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 9739

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 9738 cgagtc 9733

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                            
Query: 254      tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
                ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 23941309 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 23941250

                      
Query: 314      cgagtc 319
                ||||||
Sbjct: 23941249 cgagtc 23941244

>dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A06, full
            insert sequence
          Length = 1630

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 1354 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1295

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 1294 cgagtc 1289

>dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026P06, full
            insert sequence
          Length = 1874

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 1366 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1307

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 1306 cgagtc 1301

>dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072O04, full
            insert sequence
          Length = 3048

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 2772 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 2713

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 2712 cgagtc 2707

>dbj|AK071895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058G08, full
            insert sequence
          Length = 1536

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatctgtacttgcctatctccattttcttcttaagngccttctgtccatggtatatgaa 313
            ||||||||||||||||| ||||||||| ||||| || |||||||| || || ||||||||
Sbjct: 1260 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1201

                  
Query: 314  cgagtc 319
            ||||||
Sbjct: 1200 cgagtc 1195

>ref|NM_102070.2| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
            AT1G22200.1 mRNA, complete cds
          Length = 1576

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 270  atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
            |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 1302 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1256

>ref|NM_001036000.1| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
            AT1G22200.2 mRNA, complete cds
          Length = 1617

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 270  atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
            |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 1335 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1289

>gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1192

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 270  atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
            |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 1145 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1099

>gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1522

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 270  atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
            |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 1302 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1256

>gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete sequence
          Length = 1540

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 270  atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
            |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 1285 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1239

>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 36030

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 270   atctccattttcttcttaagngccttctgtccatggtatatgaacga 316
             |||||||||||||||||||  ||    ||||||||||||||||||||
Sbjct: 22411 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 22365

>emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on chromosome 11, complete
             sequence
          Length = 176011

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 70    atgaaagcacttgcccccaagac 92
             |||||||||||||||||||||||
Sbjct: 64927 atgaaagcacttgcccccaagac 64949

>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone
             BACR48A14, complete sequence
          Length = 188337

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 96    gcctattctgttttcctttttt 117
             ||||||||||||||||||||||
Sbjct: 76680 gcctattctgttttcctttttt 76701

>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the complete
              sequence
          Length = 216994

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 96     gcctattctgttttcctttttt 117
              ||||||||||||||||||||||
Sbjct: 150850 gcctattctgttttcctttttt 150829

>emb|BX510307.21| Zebrafish DNA sequence from clone DKEY-9F17 in linkage group 5,
             complete sequence
          Length = 102019

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   cttttttacaagttttcatca 131
             |||||||||||||||||||||
Sbjct: 99832 cttttttacaagttttcatca 99812

>gb|U61950.2| Caenorhabditis elegans cosmid C45E5, complete sequence
          Length = 27188

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tctgttttccttttttacaa 121
             ||||||||||||||||||||
Sbjct: 25156 tctgttttccttttttacaa 25137

>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete
             sequence
          Length = 236365

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 222   aaacttggaaaatgttaggtgtgg 245
             ||||||||||||| ||||||||||
Sbjct: 23124 aaacttggaaaatattaggtgtgg 23101

>gb|U41008.1| Caenorhabditis elegans cosmid F44E8, complete sequence
          Length = 26465

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  tctgttttccttttttacaa 121
            ||||||||||||||||||||
Sbjct: 7568 tctgttttccttttttacaa 7549

>emb|AL139374.18| Human DNA sequence from clone RP11-118F16 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 53536

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   tttccttttttacaagtttt 126
             ||||||||||||||||||||
Sbjct: 49536 tttccttttttacaagtttt 49555

>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
             5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
             (TiT3 complex), an aldo-keto reductase family 1 member D1
             (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
             pseudogene, the CREG gene for cellular repressor of
             E1A-stimulated genes, a ribosomal protein S18 (RPS18)
             pseudogene, a novel gene, the 5' end of the gene for a
             novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ttgcccccaagacccagcct 99
             ||||||||||||||||||||
Sbjct: 55154 ttgcccccaagacccagcct 55173

>ref|XM_782112.1| PREDICTED: Strongylocentrotus purpuratus similar to CG13409-PA
           (LOC582145), mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ttttcatggccttcggcatctcgt 176
           |||||||||| |||||||||||||
Sbjct: 74  ttttcatggctttcggcatctcgt 97

>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
             sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    attcaactaattctctaccc 63
             ||||||||||||||||||||
Sbjct: 17147 attcaactaattctctaccc 17166

>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence
          Length = 171818

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ttacaagccacaaaacttggaaaa 233
             |||||||| |||||||||||||||
Sbjct: 49494 ttacaagcaacaaaacttggaaaa 49517

>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence
          Length = 159519

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 210   ttacaagccacaaaacttggaaaa 233
             |||||||| |||||||||||||||
Sbjct: 22498 ttacaagcaacaaaacttggaaaa 22475

>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence
          Length = 194973

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   cttacaagccacaaaacttggaaa 232
             ||||| ||||||||||||||||||
Sbjct: 57742 cttaccagccacaaaacttggaaa 57765

>gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172945

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ttacaagccacaaaacttggaaaa 233
             |||||||| |||||||||||||||
Sbjct: 28899 ttacaagctacaaaacttggaaaa 28922

>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8
          Length = 80167

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    tcaactaattctctacccat 65
             ||||||||||||||||||||
Sbjct: 13526 tcaactaattctctacccat 13507

>gb|AC091777.26| Mus musculus strain C57BL/6J chromosome 17 clone rp23-355b17, complete
              sequence
          Length = 216109

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    aaacttggaaaatgttaggtgtgg 245
              ||||||||||||| ||||||||||
Sbjct: 124496 aaacttggaaaatattaggtgtgg 124473

>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  cttacaagccacaaaacttggaaa 232
            ||||| ||||||||||||||||||
Sbjct: 8059 cttaccagccacaaaacttggaaa 8082

>emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on chromosome X, complete
              sequence
          Length = 212659

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     ctattctgttttcctttttt 117
              ||||||||||||||||||||
Sbjct: 166293 ctattctgttttcctttttt 166312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,260,221
Number of Sequences: 3902068
Number of extensions: 3260221
Number of successful extensions: 69078
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69002
Number of HSP's gapped (non-prelim): 70
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)