>emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on chromosome 9, complete
              sequence
          Length = 147810

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 275    attcaaataaaactttagcctc 296
              ||||||||||||||||||||||
Sbjct: 138920 attcaaataaaactttagcctc 138941

>emb|BX004980.8| Zebrafish DNA sequence from clone DKEY-15N5 in linkage group 14, complete
              sequence
          Length = 159333

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 116    atcaaatgtagttatgatgatc 137
              ||||||||||||||||||||||
Sbjct: 121837 atcaaatgtagttatgatgatc 121858

>emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on chromosome 10 Contains a
             pseudogene similar to part of glycogen synthase kinase 3
             and a ubiquitin-conjugating enzyme pseudogene, complete
             sequence
          Length = 178942

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 271   tgaaattcaaataaaacttta 291
             |||||||||||||||||||||
Sbjct: 78371 tgaaattcaaataaaacttta 78391

>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 83627

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 265  gaaaaatgaaattcaaataaa 285
            |||||||||||||||||||||
Sbjct: 4451 gaaaaatgaaattcaaataaa 4431

>gb|AC008307.7|AC008307 Drosophila melanogaster, chromosome 3R, region 86F-87A, BAC clone
             BACR03D22, complete sequence
          Length = 157189

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   gaaaaatgaaattcaaataaa 285
             |||||||||||||||||||||
Sbjct: 97244 gaaaaatgaaattcaaataaa 97224

>gb|AC007725.5|AC007725 Drosophila melanogaster, chromosome 3R, region 87A-87A, BAC clone
             BACR03N24, complete sequence
          Length = 144152

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   gaaaaatgaaattcaaataaa 285
             |||||||||||||||||||||
Sbjct: 46963 gaaaaatgaaattcaaataaa 46943

>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence
          Length = 172617

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    aaattcaaataaaactttagc 293
              |||||||||||||||||||||
Sbjct: 170558 aaattcaaataaaactttagc 170538

>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete
              sequence
          Length = 226782

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    gaaaaatgaaattcaaataaa 285
              |||||||||||||||||||||
Sbjct: 119323 gaaaaatgaaattcaaataaa 119303

>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    cgggattaggttactttatgagtt 319
              |||||||||||| |||||||||||
Sbjct: 390762 cgggattaggttcctttatgagtt 390785

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aaatgaaattcaaataaaac 287
             ||||||||||||||||||||
Sbjct: 30119 aaatgaaattcaaataaaac 30100

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     acttgcaccttcgaaaaatg 272
               ||||||||||||||||||||
Sbjct: 5346928 acttgcaccttcgaaaaatg 5346947

>gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, complete sequence
          Length = 240173

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    gaaaaatgaaattcaaataa 284
              ||||||||||||||||||||
Sbjct: 168650 gaaaaatgaaattcaaataa 168631

>gb|AC122355.4| Mus musculus BAC clone RP23-401L7 from chromosome 14, complete sequence
          Length = 198831

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   tgaaattcaaataaaacttt 290
             ||||||||||||||||||||
Sbjct: 97357 tgaaattcaaataaaacttt 97376

>gb|AC091320.5| Homo sapiens BAC clone RP11-447A2 from 7, complete sequence
          Length = 179728

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    aaaatcaaatgtagttatgatgat 136
              ||||||| ||||||||||||||||
Sbjct: 147212 aaaatcacatgtagttatgatgat 147235

>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   acttgcaccttcgaaaaatg 272
             ||||||||||||||||||||
Sbjct: 53096 acttgcaccttcgaaaaatg 53115

>gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete sequence
          Length = 113939

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aaatgaaattcaaataaaac 287
             ||||||||||||||||||||
Sbjct: 72590 aaatgaaattcaaataaaac 72571

>emb|AL136132.15| Human DNA sequence from clone RP11-141M24 on chromosome 13q33.1-34
             Contains part of a novel gene, possible ortholog of rat
             myosin heavy chain Myr 8 (Loc192253), complete sequence
          Length = 173738

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   aaaatgaaattcaaataaaa 286
             ||||||||||||||||||||
Sbjct: 47733 aaaatgaaattcaaataaaa 47714

>emb|BX640475.3| Mouse DNA sequence from clone RP23-377F5 on chromosome 4 Contains the
            3' end of the Tle1 gene for transducin-like enhancer of
            split 1 homolog of Drosophila E(spl), complete sequence
          Length = 21444

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  tctaccaaccaataaacatg 199
            ||||||||||||||||||||
Sbjct: 2771 tctaccaaccaataaacatg 2752

>emb|AL845338.4| Mouse DNA sequence from clone RP24-480C2 on chromosome 4, complete
              sequence
          Length = 172305

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    caataaacatggtttggcca 208
              ||||||||||||||||||||
Sbjct: 153832 caataaacatggtttggcca 153813

>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   aaaatgaaattcaaataaaa 286
             ||||||||||||||||||||
Sbjct: 44440 aaaatgaaattcaaataaaa 44421

>dbj|AK147281.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1006L15 product:unclassifiable, full insert
            sequence
          Length = 4981

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  tctaccaaccaataaacatg 199
            ||||||||||||||||||||
Sbjct: 2718 tctaccaaccaataaacatg 2737

>gb|AC021264.5|AC021264 Homo sapiens chromosome , clone RP11-14H1, complete sequence
          Length = 117083

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   taccaaccaataaacatggtttgg 205
             |||||||||||||||||| |||||
Sbjct: 34468 taccaaccaataaacatgctttgg 34445

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     atgaaattcaaataaaactt 289
               ||||||||||||||||||||
Sbjct: 2869578 atgaaattcaaataaaactt 2869559

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     gaaattcaaataaaacttta 291
               ||||||||||||||||||||
Sbjct: 5792001 gaaattcaaataaaacttta 5791982

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     acttgcaccttcgaaaaatg 272
               ||||||||||||||||||||
Sbjct: 5346143 acttgcaccttcgaaaaatg 5346162

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     ttcgaaaaatgaaattcaaa 281
               ||||||||||||||||||||
Sbjct: 8959346 ttcgaaaaatgaaattcaaa 8959365

>gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, complete sequence
          Length = 212237

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   aaatgaaattcaaataaaac 287
             ||||||||||||||||||||
Sbjct: 88521 aaatgaaattcaaataaaac 88540

>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   ttcgaaaaatgaaattcaaa 281
             ||||||||||||||||||||
Sbjct: 67101 ttcgaaaaatgaaattcaaa 67120

>gb|AF257323.1|AF257323 Trichomonas vaginalis unknown gene
          Length = 8243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tttgaaacttgcaccttcga 266
            ||||||||||||||||||||
Sbjct: 7098 tttgaaacttgcaccttcga 7079



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tttgaaacttgcaccttcga 266
            ||||||||||||||||||||
Sbjct: 6423 tttgaaacttgcaccttcga 6404



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tttgaaacttgcaccttcga 266
            ||||||||||||||||||||
Sbjct: 5619 tttgaaacttgcaccttcga 5600

>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0701E06
          Length = 123415

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   gaaattcaaataaaacttta 291
             ||||||||||||||||||||
Sbjct: 88206 gaaattcaaataaaacttta 88187

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     atgaaattcaaataaaactt 289
               ||||||||||||||||||||
Sbjct: 2869522 atgaaattcaaataaaactt 2869503

>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 atgaaattcaaataaaactt 289
           ||||||||||||||||||||
Sbjct: 869 atgaaattcaaataaaactt 888

>gb|AC153512.2| Mus musculus 10 BAC RP23-18K14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209885

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    gaaaaatgaaattcaaataa 284
              ||||||||||||||||||||
Sbjct: 184088 gaaaaatgaaattcaaataa 184107

>emb|AL390097.2|CNS06C7L Human chromosome 14 DNA sequence BAC C-2278M12 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 92590

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   aaaaatgaaattcaaataaa 285
             ||||||||||||||||||||
Sbjct: 36495 aaaaatgaaattcaaataaa 36514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,904,955
Number of Sequences: 3902068
Number of extensions: 2904955
Number of successful extensions: 55617
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55394
Number of HSP's gapped (non-prelim): 223
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)