| Clone Name | rbags28e10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RL7A_ARATH (P49692) 60S ribosomal protein L7a | 47 | 1e-05 | 2 | RL7A_ORYSA (P35685) 60S ribosomal protein L7a | 46 | 3e-05 |
|---|
>RL7A_ARATH (P49692) 60S ribosomal protein L7a| Length = 257 Score = 47.4 bits (111), Expect = 1e-05 Identities = 22/27 (81%), Positives = 25/27 (92%) Frame = -1 Query: 137 GVMGSKXQAKTKARERLIAKEAAXRMN 57 G+MGSK QAKTKA+ER+IAKEAA RMN Sbjct: 231 GIMGSKSQAKTKAKERVIAKEAAQRMN 257
>RL7A_ORYSA (P35685) 60S ribosomal protein L7a| Length = 258 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = -1 Query: 137 GVMGSKXQAKTKARERLIAKEAAXRM 60 GVMGSK QAKTKARE+L+AKEAA RM Sbjct: 232 GVMGSKSQAKTKAREKLLAKEAAQRM 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,236,358 Number of Sequences: 219361 Number of extensions: 116808 Number of successful extensions: 279 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 279 length of database: 80,573,946 effective HSP length: 21 effective length of database: 75,967,365 effective search space used: 1823216760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)