ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 694 0.0
2ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 214 2e-52
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
4dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
5dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
6dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
7dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
10gb|AY108897.1| Zea mays PCO080076 mRNA sequence 168 8e-39
11gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence 66 9e-08
12ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA... 62 1e-06
13ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 62 1e-06
14emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 62 1e-06
15emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 62 1e-06
16gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 62 1e-06
17gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 62 1e-06
18gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds 60 6e-06
19gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing... 58 2e-05
20gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds 58 2e-05
21gb|AY322556.1| Brassica napus putative fatty acid desaturase BNZ... 52 0.001
22gb|AY322552.1| Triticum aestivum putative fatty acid desaturase ... 52 0.001
23gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se... 50 0.005
24gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, com... 46 0.084
25gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZI... 46 0.084
26gb|AY322554.1| Salix babylonica putative fatty acid desaturase S... 46 0.084
27gb|AY322553.1| Spinacia oleracea putative fatty acid desaturase ... 46 0.084
28gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 46 0.084
29gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, com... 42 1.3
30gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, com... 42 1.3
31gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromo... 42 1.3
32gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chrom... 42 1.3
33gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, comple... 42 1.3
34dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
35gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, co... 40 5.2
36gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, com... 40 5.2
37gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 5.2
38ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.2
39emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M... 40 5.2
40emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20... 40 5.2
41gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 5.2
42gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 5.2
43gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306... 40 5.2
44dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
45dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 5.2
46emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 40 5.2
47dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 5.2
48gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 40 5.2 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase
            (Xantha-l) gene, complete cds
          Length = 2097

 Score =  694 bits (350), Expect = 0.0
 Identities = 361/364 (99%), Gaps = 1/364 (0%)
 Strand = Plus / Minus

                                                                        
Query: 27   caggtgagcacaggnaagatgtagatcatgttaattaaccatggaccctgtgctcattta 86
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 caggtgagcacagg-aagatgtagatcatgttaattaaccatggaccctgtgctcattta 2039

                                                                        
Query: 87   gagactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcct 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 gagactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcct 1979

                                                                        
Query: 147  ttttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccaga 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 ttttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccaga 1919

                                                                        
Query: 207  ctcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1918 ctcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagg 1859

                                                                        
Query: 267  aaccctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatctt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 aaccctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatctt 1799

                                                                        
Query: 327  caggttgatatctaccatcctgtctaacttcctcttgaattcanggttctcaacatccgg 386
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1798 caggttgatatctaccatcctgtctaacttcctcttgaattcagggttctcaacatccgg 1739

                
Query: 387  naca 390
             |||
Sbjct: 1738 taca 1735
to top
>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1227 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1168

                                                                        
Query: 219  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1167 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1108

                                                                        
Query: 279  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1107 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1048

                                                   
Query: 339  taccatcctgtctaacttcctcttgaattcanggttctc 377
             |||||||||||||||||||||||||||||| |||||||
Sbjct: 1047 caccatcctgtctaacttcctcttgaattcagggttctc 1009
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                           
Query: 159     tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
               |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 9875240 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 9875181

                                                                           
Query: 219     catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
               ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 9875180 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 9875121

                                                                           
Query: 279     gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
               ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 9875120 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 9875061

                                                      
Query: 339     taccatcctgtctaacttcctcttgaattcanggttctc 377
                |||||||||||||||||||||||||||||| |||||||
Sbjct: 9875060 caccatcctgtctaacttcctcttgaattcagggttctc 9875022
to top
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                          
Query: 159    tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
              |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 139490 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 139431

                                                                          
Query: 219    catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
              ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 139430 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 139371

                                                                          
Query: 279    gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
              ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 139370 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 139311

                                                     
Query: 339    taccatcctgtctaacttcctcttgaattcanggttctc 377
               |||||||||||||||||||||||||||||| |||||||
Sbjct: 139310 caccatcctgtctaacttcctcttgaattcagggttctc 139272
to top
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                         
Query: 159   tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
             |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 11006 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 10947

                                                                         
Query: 219   catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
             ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 10946 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 10887

                                                                         
Query: 279   gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
             ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 10886 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 10827

                                                    
Query: 339   taccatcctgtctaacttcctcttgaattcanggttctc 377
              |||||||||||||||||||||||||||||| |||||||
Sbjct: 10826 caccatcctgtctaacttcctcttgaattcagggttctc 10788
to top
>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
            insert sequence
          Length = 1691

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1275 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1216

                                                                        
Query: 219  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1215 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1156

                                                                        
Query: 279  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1155 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1096

                                                   
Query: 339  taccatcctgtctaacttcctcttgaattcanggttctc 377
             |||||||||||||||||||||||||||||| |||||||
Sbjct: 1095 caccatcctgtctaacttcctcttgaattcagggttctc 1057
to top
>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full
           insert sequence
          Length = 618

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                       
Query: 159 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
           |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 350 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 291

                                                                       
Query: 219 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
           ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 290 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 231

                                                                       
Query: 279 gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
           ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 230 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 171

                                                  
Query: 339 taccatcctgtctaacttcctcttgaattcanggttctc 377
            |||||||||||||||||||||||||||||| |||||||
Sbjct: 170 caccatcctgtctaacttcctcttgaattcagggttctc 132
to top
>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
            insert sequence
          Length = 1944

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1265 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1206

                                                                        
Query: 219  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1205 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1146

                                                                        
Query: 279  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1145 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1086

                                                   
Query: 339  taccatcctgtctaacttcctcttgaattcanggttctc 377
             |||||||||||||||||||||||||||||| |||||||
Sbjct: 1085 caccatcctgtctaacttcctcttgaattcagggttctc 1047
to top
>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
            insert sequence
          Length = 1533

 Score =  214 bits (108), Expect = 2e-52
 Identities = 191/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 218
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1261 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1202

                                                                        
Query: 219  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 278
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1201 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1142

                                                                        
Query: 279  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 338
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1141 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1082

                                                   
Query: 339  taccatcctgtctaacttcctcttgaattcanggttctc 377
             |||||||||||||||||||||||||||||| |||||||
Sbjct: 1081 caccatcctgtctaacttcctcttgaattcagggttctc 1043
to top
>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  168 bits (85), Expect = 8e-39
 Identities = 174/204 (85%)
 Strand = Plus / Minus

                                                                        
Query: 174  gggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagc 233
            ||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct: 1251 gggctcaaattcggcgaaatcaaccgagccagactcgatggggggcatgaggtaggcggc 1192

                                                                        
Query: 234  gatgatctcagacactagttgggcaataagaggaaccctcttcaggttcttcaccagggg 293
            ||||||||| ||||| ||   ||| | |||||||| |||||||||||||||||| |||||
Sbjct: 1191 gatgatctcggacaccagagaggcgacaagaggaatcctcttcaggttcttcactagggg 1132

                                                                        
Query: 294  caagtcgttggactctcctatagaaatgatcttcaggttgatatctaccatcctgtctaa 353
             |  |||| ||||||||| |  | |||||||||| ||||||| || ||||||||||| | 
Sbjct: 1131 gatttcgtcggactctccgacggcaatgatcttctggttgatctcaaccatcctgtcaag 1072

                                    
Query: 354  cttcctcttgaattcanggttctc 377
            |||||||||||| ||  |||||||
Sbjct: 1071 cttcctcttgaactctgggttctc 1048
to top
>gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence
          Length = 1416

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 340  accatcctgtctaacttcctcttgaattcanggttctcaacatc 383
            ||||||||||| |||||||||||||||||  |||||||||||||
Sbjct: 1063 accatcctgtccaacttcctcttgaattctgggttctcaacatc 1020
to top
>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds
          Length = 1481

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 163  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1222 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1281

                                   
Query: 223  aggtacgcagcgatgatctcaga 245
            || || ||||| | |||||||||
Sbjct: 1282 agataagcagccaagatctcaga 1304



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 355  ttcctcttgaattcanggttctcaacatcc 384
            ||||||||||| ||| ||||||||||||||
Sbjct: 1414 ttcctcttgaactcagggttctcaacatcc 1443
to top
>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103)
            mRNA, complete cds
          Length = 1602

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 163  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1216

                                   
Query: 223  aggtacgcagcgatgatctcaga 245
            || || ||||| | |||||||||
Sbjct: 1215 agataagcagccaagatctcaga 1193



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 355  ttcctcttgaattcanggttctcaacatcc 384
            ||||||||||| ||| ||||||||||||||
Sbjct: 1083 ttcctcttgaactcagggttctcaacatcc 1054
to top
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 163   tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
             |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 94188 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 94129

                                    
Query: 223   aggtacgcagcgatgatctcaga 245
             || || ||||| | |||||||||
Sbjct: 94128 agataagcagccaagatctcaga 94106



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 355   ttcctcttgaattcanggttctcaacatcc 384
             ||||||||||| ||| ||||||||||||||
Sbjct: 93996 ttcctcttgaactcagggttctcaacatcc 93967
to top
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 163  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 6275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 6216

                                   
Query: 223  aggtacgcagcgatgatctcaga 245
            || || ||||| | |||||||||
Sbjct: 6215 agataagcagccaagatctcaga 6193



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 355  ttcctcttgaattcanggttctcaacatcc 384
            ||||||||||| ||| ||||||||||||||
Sbjct: 6083 ttcctcttgaactcagggttctcaacatcc 6054
to top
>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
            mRNA, complete cds
          Length = 1407

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 163  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1265 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1206

                                   
Query: 223  aggtacgcagcgatgatctcaga 245
            || || ||||| | |||||||||
Sbjct: 1205 agataagcagccaagatctcaga 1183



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 355  ttcctcttgaattcanggttctcaacatcc 384
            ||||||||||| ||| ||||||||||||||
Sbjct: 1073 ttcctcttgaactcagggttctcaacatcc 1044
to top
>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 163  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 222
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1241 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1182

                                   
Query: 223  aggtacgcagcgatgatctcaga 245
            || || ||||| | |||||||||
Sbjct: 1181 agataagcagccaagatctcaga 1159



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 355  ttcctcttgaattcanggttctcaacatcc 384
            ||||||||||| ||| ||||||||||||||
Sbjct: 1049 ttcctcttgaactcagggttctcaacatcc 1020
to top
>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds
          Length = 1323

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 340 accatcctgtctaacttcctcttgaattcanggttctcaac 380
           ||||||||||| |||||||||||||||||  ||||||||||
Sbjct: 945 accatcctgtccaacttcctcttgaattctgggttctcaac 905
to top
>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds
          Length = 5083

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                         
Query: 340  accatcctgtctaacttcctcttgaattc 368
            |||||||||||||||||||||||||||||
Sbjct: 1797 accatcctgtctaacttcctcttgaattc 1825



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 259  ataagaggaaccctcttcaggttcttcac 287
            ||||| ||||||||||||| |||||||||
Sbjct: 4641 ataagtggaaccctcttcaagttcttcac 4613



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 340  accatcctgtctaacttcctcttgaattc 368
            ||||| ||||| |||||||||||||||||
Sbjct: 4560 accattctgtccaacttcctcttgaattc 4532
to top
>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds
          Length = 1403

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 340  accatcctgtctaacttcctcttgaattcanggttctcaacatc 383
            ||||||||||| |||||||||||||| ||  |||||||||||||
Sbjct: 1048 accatcctgtccaacttcctcttgaactccgggttctcaacatc 1005
to top
>gb|AY322556.1| Brassica napus putative fatty acid desaturase BNZIP mRNA, partial
           cds
          Length = 924

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 340 accatcctgtctaacttcctcttgaattcanggttctcaacatcc 384
           ||||| || |||| |||||||||||| ||| ||||||||||||||
Sbjct: 737 accattctatctagcttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 175 ggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagcg 234
           ||||| |||||||| |||||||| ||||||||||| |  || |||||||| || ||||| 
Sbjct: 902 ggctcgaattcggcgaaatcaacagagccagactcaacaggaggcatgagataagcagcc 843

                     
Query: 235 atgatctcag 244
           | ||||||||
Sbjct: 842 aagatctcag 833



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 355 ttcctcttgaattcanggttctcaacatcc 384
           ||||||||||| ||| ||||||||||||||
Sbjct: 722 ttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence
          Length = 96930

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 161   agtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggca 220
             |||| ||||| || || ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct: 95940 agtaaacaagttttggttcaaactctgcaaaatcaacagatccagactcgattggtggca 95881

              
Query: 221   t 221
             |
Sbjct: 95880 t 95880



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 340   accatcctgtctaacttcctcttgaattcanggttctcaacatc 383
             ||||||||||| |||||||||||||| ||  ||||||| |||||
Sbjct: 95761 accatcctgtccaacttcctcttgaactctgggttctctacatc 95718
to top
>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence
          Length = 173716

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 270   cctcttcaggttcttcaccaggg 292
             |||||||||||||||||||||||
Sbjct: 64529 cctcttcaggttcttcaccaggg 64551
to top
>gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZIP mRNA, partial
           cds
          Length = 999

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 355 ttcctcttgaattcanggttctcaacatcc 384
           ||||||||||| ||| ||||||||||||||
Sbjct: 818 ttcctcttgaactcagggttctcaacatcc 789
to top
>gb|AY322554.1| Salix babylonica putative fatty acid desaturase SBZIP mRNA, partial
           cds
          Length = 999

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 355 ttcctcttgaattcanggttctcaacatcc 384
           ||||||||||| ||| ||||||||||||||
Sbjct: 818 ttcctcttgaactcagggttctcaacatcc 789
to top
>gb|AY322553.1| Spinacia oleracea putative fatty acid desaturase SOZIP mRNA,
           partial cds
          Length = 903

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 355 ttcctcttgaattcanggttctcaacatcc 384
           ||||||||||| ||| ||||||||||||||
Sbjct: 722 ttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 270   cctcttcaggttcttcaccaggg 292
             |||||||||||||||||||||||
Sbjct: 21035 cctcttcaggttcttcaccaggg 21013
to top
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence
          Length = 186659

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 294    caagtcgttggactctcctatagaa 318
              ||||| |||||||||||||||||||
Sbjct: 148356 caagtagttggactctcctatagaa 148332
to top
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence
          Length = 168986

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 294    caagtcgttggactctcctatagaa 318
              ||||| |||||||||||||||||||
Sbjct: 166280 caagtagttggactctcctatagaa 166256
to top
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
             sequence
          Length = 155911

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   ctctcctatagaaatgatctt 326
             |||||||||||||||||||||
Sbjct: 56233 ctctcctatagaaatgatctt 56253
to top
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete
           sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 306 ctctcctatagaaatgatctt 326
           |||||||||||||||||||||
Sbjct: 425 ctctcctatagaaatgatctt 405
to top
>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence
          Length = 148689

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   ctctcctatagaaatgatctt 326
             |||||||||||||||||||||
Sbjct: 98032 ctctcctatagaaatgatctt 98052
to top
>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 161    agtagacaagcttgggctcaaattc 185
              ||||||||||||||| |||||||||
Sbjct: 149100 agtagacaagcttggtctcaaattc 149076
to top
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence
          Length = 200229

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   tcctatagaaatgatcttca 328
             ||||||||||||||||||||
Sbjct: 81049 tcctatagaaatgatcttca 81030
to top
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence
          Length = 165405

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    atgcatcattatgtttgtaa 125
              ||||||||||||||||||||
Sbjct: 100909 atgcatcattatgtttgtaa 100890
to top
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete
            sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  atgcatcattatgtttgtaa 125
            ||||||||||||||||||||
Sbjct: 1404 atgcatcattatgtttgtaa 1385
to top
>ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00831.1)
            partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  gcaataagaggaaccctcttcagg 279
            ||||||||||||||| ||||||||
Sbjct: 2081 gcaataagaggaaccttcttcagg 2058
to top
>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3
             Contains the 3' end of the SUMO-1-specific protease
             (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI
             (DFNA22 KIAA0389) and one CpG island, complete sequence
          Length = 121764

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gagcatgatgcatcattatg 118
             ||||||||||||||||||||
Sbjct: 43566 gagcatgatgcatcattatg 43585
to top
>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12,
             complete sequence
          Length = 65237

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ctatagaaatgatcttcagg 330
             ||||||||||||||||||||
Sbjct: 58039 ctatagaaatgatcttcagg 58058
to top
>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    gtaaagataggcagagatga 141
              ||||||||||||||||||||
Sbjct: 141296 gtaaagataggcagagatga 141277
to top
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tgtaaagataggcagagatg 140
             ||||||||||||||||||||
Sbjct: 95539 tgtaaagataggcagagatg 95520
to top
>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete
             sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   agacaagcttgggctcaaat 183
             ||||||||||||||||||||
Sbjct: 64006 agacaagcttgggctcaaat 64025
to top
>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 tttttcgacaaattcagtag 165
           ||||||||||||||||||||
Sbjct: 631 tttttcgacaaattcagtag 612
to top
>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete
              sequences
          Length = 206624

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    ctctcctatagaaatgatct 325
              ||||||||||||||||||||
Sbjct: 158166 ctctcctatagaaatgatct 158147
to top
>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   atgatgcatcattatgtttg 122
             ||||||||||||||||||||
Sbjct: 72853 atgatgcatcattatgtttg 72872
to top
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     attcggcaaaatcaacggag 201
               ||||||||||||||||||||
Sbjct: 3368423 attcggcaaaatcaacggag 3368442
to top
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    gtaaagataggcagagatga 141
              ||||||||||||||||||||
Sbjct: 162669 gtaaagataggcagagatga 162688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,773,251
Number of Sequences: 3902068
Number of extensions: 2773251
Number of successful extensions: 53720
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53605
Number of HSP's gapped (non-prelim): 105
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top