ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L28091.1|BLYTRA Hordeum vulgare transmembrane protein mRNA fr... 961 0.0
2emb|X57554.1|HVBLT14 H. vulgare BLT14 mRNA 914 0.0
3emb|AJ132439.1|TAE132439 Triticum aestivum mRNA for protein enco... 361 1e-96
4gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partia... 172 7e-40
5gb|AF271260.1|AF271260 Triticum aestivum cold-responsive protein... 153 7e-34
6gb|L28093.1|WHTCOREG Triticum aestivum pTACR7 (tacr7) mRNA, part... 101 2e-18
7emb|Z23257.1|SCRLT141A S.cereale RLT1412 mRNA, complete CDS 101 2e-18
8emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene 100 9e-18
9emb|X97916.1|HVBLT141 H.vulgare blt14.1 gene 94 5e-16
10gb|L28092.1|BLYTRAA Hordeum vulgare transmembrane protein mRNA f... 94 5e-16
11gb|AF069331.2|AF069331 Hordeum vulgare clone BLTI-5 low temperat... 86 1e-13
12emb|Y14061.1|HVY14061 Hordeum vulgare mRNA for a cold-regulated ... 86 1e-13
13emb|Z23258.1|SCACCPROA S.cereale acclimation protein mRNA, compl... 68 3e-08
14ref|XM_414354.1| PREDICTED: Gallus gallus similar to cadherin EG... 42 1.7
15emb|AL021175.1|CEY6E2A Caenorhabditis elegans YAC Y6E2A, complet... 42 1.7
16emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 42 1.7
17gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, comple... 42 1.7
18ref|NM_074515.3| Caenorhabditis elegans Seven TM Receptor family... 42 1.7
19emb|BX828293.1|CNS0A346 Arabidopsis thaliana Full-length cDNA Co... 42 1.7
20gb|AF033703.1|AF033703 Notoacmaea petterdi histone H3 gene, part... 42 1.7
21gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Can... 40 6.9
22emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on ch... 40 6.9
23emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.9
24emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 6.9
25dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.9
26gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complet... 40 6.9
27gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 40 6.9
28dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.9
29dbj|AK132876.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.9
30gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Canc... 40 6.9
31gb|AC012519.9|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell P... 40 6.9
32emb|CR854904.9| Zebrafish DNA sequence from clone CH211-214F6 in... 40 6.9
33gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.9 
>gb|L28091.1|BLYTRA Hordeum vulgare transmembrane protein mRNA fragment
          Length = 541

 Score =  961 bits (485), Expect = 0.0
 Identities = 500/504 (99%), Gaps = 1/504 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   atttattatgtn-ttgttgatacatgtagcgcacaaggaacgaaaaatacgagacgggaa 62
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atttattatgtcattgttgatacatgtagcgcacaaggaacgaaaaatacgagacgggaa 459

                                                                       
Query: 63  ctggaaataaatacagatgacagttgatacagacgctcagtaccgaacatggacatgagc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctggaaataaatacagatgacagttgatacagacgctcagtaccgaacatggacatgagc 399

                                                                       
Query: 123 gaaacgtcggcctttttcttcctggcggtgctacctatagaatctaaagggacaaggcga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gaaacgtcggcctttttcttcctggcggtgctacctatagaatctaaagggacaaggcga 339

                                                                       
Query: 183 gctttagcttcttgtagcgccagcacatgaggtagagatgatcatgggccgatagcaggg 242
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 338 gctttagcttcttgtagcgccacgacatgaggtagagatgatcatgggccgatagcaggg 279

                                                                       
Query: 243 atcccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttcccccc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atcccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttcccccc 219

                                                                       
Query: 303 agcagaggcaagtccaaagccttggagtcgccgacgccaccgctggcaccggcaccgtgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agcagaggcaagtccaaagccttggagtcgccgacgccaccgctggcaccggcaccgtgt 159

                                                                       
Query: 363 gtcgctgcaaccttctctttcagctcccgcccgtcgcatgacgcgagcaccaccagtagc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtcgctgcaaccttctctttcagctcccgcccgtcgcatgacgcgagcaccaccagtagc 99

                                                                       
Query: 423 aggagcgcgacggcgagactctttgccattgctcactgagaagttttgatattactactg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  aggagcgcgacggcgagactctttgccattgctcactgagaagttttgatattactactg 39

                                   
Query: 483 acgagacagtttagcttgtgtggc 506
           ||||||||||||||||||||||||
Sbjct: 38  acgagacagtttagcttgtgtggc 15
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>emb|X57554.1|HVBLT14 H. vulgare BLT14 mRNA
          Length = 514

 Score =  914 bits (461), Expect = 0.0
 Identities = 486/492 (98%), Gaps = 2/492 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgtatttattatgtn-ttgttgatacatgtagcgcacaaggaacgaaaaatacgagacgg 59
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgtatttattatgtcattgttgatacatgtagcgcacaaggaacgaaaaatacgagacgg 433

                                                                       
Query: 60  gaactggaaataaatacagatgacagttgatacagacgctcagtaccgaacatggacatg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaactggaaataaatacagatgacagttgatacagacgctcagtaccgaacatggacatg 373

                                                                       
Query: 120 agcgaaacgtcggcctttttcttcctggcggtgctacctatagaatctaaagggacaagg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agcgaaacgtcggcctttttcttcctggcggtgctacctatagaatctaaagggacaagg 313

                                                                       
Query: 180 cgagctttagcttcttgtagcgccagcacatgaggtagagatgatcatgggccgatagca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgagctttagcttcttgtagcgccagcacatgaggtagagatgatcatgggccgatagca 253

                                                                       
Query: 240 gggatcccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttccc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gggatcccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttccc 193

                                                                       
Query: 300 cccagcagaggcaagtccaaagccttggagtcgccgacgccaccgctggcaccggcaccg 359
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cccagcagcggcaagtccaaagccttggagtcgccgacgccaccgctggcaccggcaccg 133

                                                                       
Query: 360 tgtgtcgctgcaaccttctctttcagctcccgcccgtcgcatgacgcgagcaccaccagt 419
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 132 tgtgtcgctgcaaccttctctttcacgtcccgcccgtcgcatgacgcgagcaccaccagt 73

                                                                       
Query: 420 agca-ggagcgcgacggcgagactctttgccattgctcactgagaagttttgatattact 478
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  agcacggagcgcgacggcgagactctttgccattgctcactgagaagttttgatattact 13

                       
Query: 479 actgacgagaca 490
           ||||||||||||
Sbjct: 12  actgacgagaca 1
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>emb|AJ132439.1|TAE132439 Triticum aestivum mRNA for protein encoded by lt1.1 gene, partial
          Length = 416

 Score =  361 bits (182), Expect = 1e-96
 Identities = 348/399 (87%), Gaps = 6/399 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   ttattatgtnttgttgatacatgtagcgca-caaggaacgaaaaatacgaga-cgggaac 63
           ||||||| | ||| || |||||||||| || ||||||||||||||||||||| |  ||||
Sbjct: 401 ttattatttattgatggtacatgtagcacatcaaggaacgaaaaatacgagaacatgaac 342

                                                                       
Query: 64  tggaaataaata---cagatgacagttgatacagacgctcagtaccgaacatggacatga 120
           |||||||| |||   ||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 341 tggaaatagatagtacagatgacagttgatacaggcgctcagtaccgaacatggaaatga 282

                                                                       
Query: 121 gcgaaacgtcggcctttttcttcctggcggtgctacctatagaatctaaagggacaaggc 180
           || ||||||| || |||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 281 gcaaaacgtccgctttttccttcccggcggtgctacctacagaatctaaagcgacaaggc 222

                                                                       
Query: 181 gagctttagcttcttgtagcgccagcacatgaggtagagatgatcatgggccgatagcag 240
           ||||||||||| ||||||  |||||||||||||  ||||||||||||||||| |||||||
Sbjct: 221 gagctttagctccttgtaa-gccagcacatgagccagagatgatcatgggccaatagcag 163

                                                                       
Query: 241 ggatcccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttcccc 300
           |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 162 ggatcccaggaagcaccaccagcgggccggtaatggtgctggttcccgtaccggttcccc 103

                                                                       
Query: 301 ccagcagaggcaagtccaaagccttggagtcgccgacgccaccgctggcaccggcaccgt 360
           | |||| |||||||||||| ||||| || ||||||||||| || |  |||||  |  |  
Sbjct: 102 cgagcaaaggcaagtccaacgccttagactcgccgacgccgccacccgcacctacgacac 43

                                                  
Query: 361 gtgtcgctgcaaccttctctttcagctcccgcccgtcgc 399
           | ||||||||||||||||| |||||||||| ||| ||||
Sbjct: 42  gcgtcgctgcaaccttctcattcagctccctcccttcgc 4
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>gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partial cds
          Length = 770

 Score =  172 bits (87), Expect = 7e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                       
Query: 320 agccttggagtcgccgacgccaccgctggcaccggcaccgtgtgtcgctgcaaccttctc 379
           ||||||||| ||||||||||| |||| | ||||||||||| ||||||||||| |||||||
Sbjct: 387 agccttggactcgccgacgccgccgccgacaccggcaccgcgtgtcgctgcagccttctc 328

                                                                       
Query: 380 tttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgag 439
            |||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||
Sbjct: 327 gttcagctccctcccgtcgcaggacgcgagcagcaccactagcaggagcgcgacggcgag 268

                          
Query: 440 actctttgccattgc 454
           || ||||||||||||
Sbjct: 267 acactttgccattgc 253



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 254 caccaccagcgggccggtaatggt 277
           |||||||| |||||||||||||||
Sbjct: 546 caccaccaccgggccggtaatggt 523
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>gb|AF271260.1|AF271260 Triticum aestivum cold-responsive protein (Wlt10) mRNA, complete
           cds
          Length = 548

 Score =  153 bits (77), Expect = 7e-34
 Identities = 131/149 (87%)
 Strand = Plus / Minus

                                                                       
Query: 351 ccggcaccgtgtgtcgctgcaaccttctctttcagctcccgcccgtcgcatgacgcgagc 410
           ||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||
Sbjct: 149 ccggcaccgcgtgtcgctgcaaccttctcgttcagctccctcccgtcgcaggacgcgagc 90

                                                                       
Query: 411 accaccagtagcaggagcgcgacggcgagactctttgccattgctcactgagaagttttg 470
           ||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| || | | ||
Sbjct: 89  accgccagtagcaggagcgcggcggcgagacacttcgccattgctaactgggaggctctg 30

                                        
Query: 471 atattactactgacgagacagtttagctt 499
            || ||||||||| |||| ||| ||||||
Sbjct: 29  gtaatactactgaggagatagtctagctt 1
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>gb|L28093.1|WHTCOREG Triticum aestivum pTACR7 (tacr7) mRNA, partial cds
          Length = 292

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                       
Query: 224 tcatgggccgatagcagggatcccagggatcaccaccagcgggccggtaatggtgcttgt 283
           ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||
Sbjct: 292 tcatgggccgagagcagggatcccaggaagcaccaccagcgggccggtaatggtgctggt 233

                          
Query: 284 tccggtaccggttcc 298
            |||||| |||||||
Sbjct: 232 accggtaacggttcc 218



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           |||||||||| |||||||||  |||||||| |||||||||| ||||||||||||||||||
Sbjct: 120 ttcagctccctcccgtcgcagtacgcgagcgccaccagtaggaggagcgcgacggcgaga 61

                      
Query: 441 ctctttgccat 451
           |||||||||||
Sbjct: 60  ctctttgccat 50
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>emb|Z23257.1|SCRLT141A S.cereale RLT1412 mRNA, complete CDS
          Length = 525

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           |||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||
Sbjct: 116 ttcagctccctcccgtcgcagtacgcgagcaccaccagtagcaggagcgcggcggcgaga 57

                      
Query: 441 ctctttgccat 451
           | |||||||||
Sbjct: 56  cactttgccat 46



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 84  agttgatacagacgctcagtaccgaacatggacatgagcgaaacg 128
           |||||||||||||||||| ||  |||||||   ||||||||||||
Sbjct: 428 agttgatacagacgctcattaaggaacatgctaatgagcgaaacg 384
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>emb|X97917.1|HVBLT142 H.vulgare blt14.2 gene
          Length = 687

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 382 tcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgagac 441
           ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 297 tcagctccctcccatcgcaggacgcgagcaccaccagtagcaggagcgcgacggcaagac 238

                         
Query: 442 tctttgccattgct 455
            ||| |||||||||
Sbjct: 237 acttcgccattgct 224



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 245 cccagggatcaccaccagcgggccggtaatggtgcttgttccggtaccggttccc 299
           |||||| |||||||||||||||||| ||||||| || || |||||||||||||||
Sbjct: 458 cccaggaatcaccaccagcgggccgttaatggtactggtaccggtaccggttccc 404
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>emb|X97916.1|HVBLT141 H.vulgare blt14.1 gene
          Length = 963

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           ||||||||||  ||||||||  ||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 ttcagctccctaccgtcgcagtacgcgagcaccaccagtagcaggagcgcggcggcgaga 432

                      
Query: 441 ctctttgccat 451
           | |||||||||
Sbjct: 431 cactttgccat 421



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 330 tcgccgacgccaccgctggcaccggcaccg 359
           |||||||||||||| | |||||||||||||
Sbjct: 557 tcgccgacgccaccaccggcaccggcaccg 528
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>gb|L28092.1|BLYTRAA Hordeum vulgare transmembrane protein mRNA fragment
          Length = 642

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           ||||||||||  ||||||||  ||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 ttcagctccctaccgtcgcagtacgcgagcaccaccagtagcaggagcgcggcggcgaga 123

                      
Query: 441 ctctttgccat 451
           | |||||||||
Sbjct: 122 cactttgccat 112



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 330 tcgccgacgccaccgctggcaccggcaccg 359
           |||||||||||||| | |||||||||||||
Sbjct: 248 tcgccgacgccaccaccggcaccggcaccg 219
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>gb|AF069331.2|AF069331 Hordeum vulgare clone BLTI-5 low temperature induced protein mRNA,
           complete cds
          Length = 546

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           |||||||||| |||||||||  |||||||| |||||||||| ||||||||||||||||| 
Sbjct: 171 ttcagctccctcccgtcgcagtacgcgagcgccaccagtaggaggagcgcgacggcgagg 112

                      
Query: 441 ctctttgccat 451
           | |||||||||
Sbjct: 111 cactttgccat 101



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 82/99 (82%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                       
Query: 201 gccagcacatgaggtagagatgatcatgggccgatagcagggatcccagggatcaccacc 260
           ||||||||||||  ||| ||||||||||||     ||||||||||||||| | |||||||
Sbjct: 354 gccagcacatgaactagtgatgatcatgggtg---agcagggatcccaggaagcaccacc 298

                                                  
Query: 261 agcgggccggtaatggtgcttgttccggtaccggttccc 299
           | ||||||| || ||||||| || |||||| | ||||||
Sbjct: 297 aacgggccgttagtggtgctggtaccggtaactgttccc 259
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>emb|Y14061.1|HVY14061 Hordeum vulgare mRNA for a cold-regulated protein
          Length = 484

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 381 ttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcaggagcgcgacggcgaga 440
           |||||||||| |||||||||  |||||||| |||||||||| ||||||||||||||||| 
Sbjct: 94  ttcagctccctcccgtcgcagtacgcgagcgccaccagtaggaggagcgcgacggcgagg 35

                      
Query: 441 ctctttgccat 451
           | |||||||||
Sbjct: 34  cactttgccat 24



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 82/99 (82%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                       
Query: 201 gccagcacatgaggtagagatgatcatgggccgatagcagggatcccagggatcaccacc 260
           ||||||||||||  ||| ||||||||||||     ||||||||||||||| | |||||||
Sbjct: 277 gccagcacatgaactagtgatgatcatgggtg---agcagggatcccaggaagcaccacc 221

                                                  
Query: 261 agcgggccggtaatggtgcttgttccggtaccggttccc 299
           | ||||||| || ||||||| || || ||| ||||||||
Sbjct: 220 aacgggccgttagtggtgctggtaccagtaacggttccc 182
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>emb|Z23258.1|SCACCPROA S.cereale acclimation protein mRNA, complete CDS
          Length = 479

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 373 ccttctctttcagctcccgcccgtcgcatgacgcgagcaccaccagtagcagga 426
           ||||||| |||||||||| ||| ||||| || ||||||||||||||||||||||
Sbjct: 54  ccttctcgttcagctccctcccttcgcaggaggcgagcaccaccagtagcagga 1



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 238 cagggatcccagggatcaccaccagcgggccggtaatggtgcttgttccggta 290
           |||| |||||||| |||||||||||||||||| ||||||| || |||||||||
Sbjct: 204 caggaatcccaggaatcaccaccagcgggccgttaatggtactggttccggta 152
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>ref|XM_414354.1| PREDICTED: Gallus gallus similar to cadherin EGF LAG seven-pass
            G-type receptor 3; multiple EGF-like domains 2;
            EGF-like-domain, multiple 1; epidermal growth factor-like
            1; cadherin EGF LAG seven-pass G-type receptor 3,
            flamingo (Drosophila) homolog (LOC416011), mRNA
          Length = 12274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 252  atcaccaccagcgggccggta 272
            |||||||||||||||||||||
Sbjct: 3635 atcaccaccagcgggccggta 3655
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>emb|AL021175.1|CEY6E2A Caenorhabditis elegans YAC Y6E2A, complete sequence
          Length = 22377

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   ccattgctcactgagaagttt 468
             |||||||||||||||||||||
Sbjct: 22172 ccattgctcactgagaagttt 22192
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>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
              sequence
          Length = 158069

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    ggatcccagggatcaccacca 261
              |||||||||||||||||||||
Sbjct: 152949 ggatcccagggatcaccacca 152929
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>gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, complete sequence
          Length = 178780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 459    tgagaagttttgatattacta 479
              |||||||||||||||||||||
Sbjct: 136925 tgagaagttttgatattacta 136945
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>ref|NM_074515.3| Caenorhabditis elegans Seven TM Receptor family member (str-38)
           (str-38) mRNA, complete cds
          Length = 1825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 448 ccattgctcactgagaagttt 468
           |||||||||||||||||||||
Sbjct: 825 ccattgctcactgagaagttt 805
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>emb|BX828293.1|CNS0A346 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZH08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1593

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 485 gagacagtttagcttgtgtggctgc 509
           ||||||||| |||||||||||||||
Sbjct: 722 gagacagttcagcttgtgtggctgc 746
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>gb|AF033703.1|AF033703 Notoacmaea petterdi histone H3 gene, partial cds
          Length = 274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 410 caccaccagtagcaggagcgc 430
           |||||||||||||||||||||
Sbjct: 65  caccaccagtagcaggagcgc 45
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>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 192392

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    catgaggtagagatgatcat 227
              ||||||||||||||||||||
Sbjct: 173220 catgaggtagagatgatcat 173201



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    catgaggtagagatgatcat 227
              ||||||||||||||||||||
Sbjct: 163082 catgaggtagagatgatcat 163063
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>emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on chromosome 9 Contains a
             novel gene (FLJ33868) and 2 CpG islands, complete sequence
          Length = 174911

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ccccagcagaggcaagtcca 318
             ||||||||||||||||||||
Sbjct: 16334 ccccagcagaggcaagtcca 16353
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    caccgctggcaccggcaccg 359
              ||||||||||||||||||||
Sbjct: 118088 caccgctggcaccggcaccg 118069
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>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             3/8
          Length = 347625

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 330   tcgccgacgccaccgctggcaccg 353
             |||||| |||||||||||||||||
Sbjct: 84896 tcgccgtcgccaccgctggcaccg 84873
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 330     tcgccgacgccaccgctggcaccg 353
               |||||||||||||||| |||||||
Sbjct: 3131598 tcgccgacgccaccgcgggcaccg 3131621
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>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence
          Length = 48498

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 342  ccgctggcaccggcaccgtg 361
            ||||||||||||||||||||
Sbjct: 9273 ccgctggcaccggcaccgtg 9292
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>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    ccgctggcaccggcaccgtg 361
              ||||||||||||||||||||
Sbjct: 156788 ccgctggcaccggcaccgtg 156807
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     ccagcgggccggtaatggtg 278
               ||||||||||||||||||||
Sbjct: 2825820 ccagcgggccggtaatggtg 2825839
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>dbj|AK132876.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930473F20 product:unclassifiable, full
            insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  catgaggtagagatgatcat 227
            ||||||||||||||||||||
Sbjct: 1171 catgaggtagagatgatcat 1190
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>gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183269

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   catgaggtagagatgatcat 227
             ||||||||||||||||||||
Sbjct: 23176 catgaggtagagatgatcat 23157



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   catgaggtagagatgatcat 227
             ||||||||||||||||||||
Sbjct: 13038 catgaggtagagatgatcat 13019
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>gb|AC012519.9|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 184447

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   ggaaataaatacagatgaca 84
            ||||||||||||||||||||
Sbjct: 1413 ggaaataaatacagatgaca 1432
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>emb|CR854904.9| Zebrafish DNA sequence from clone CH211-214F6 in linkage group 10,
             complete sequence
          Length = 116150

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   gcgagctttagcttcttgtagcgc 202
             ||||| ||||||||||||||||||
Sbjct: 32931 gcgagttttagcttcttgtagcgc 32908
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 330     tcgccgacgccaccgctggcaccg 353
               |||||||||||||||| |||||||
Sbjct: 3138906 tcgccgacgccaccgcgggcaccg 3138929


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,986,644
Number of Sequences: 3902068
Number of extensions: 3986644
Number of successful extensions: 68702
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68484
Number of HSP's gapped (non-prelim): 214
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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