ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28d12 |
|---|---|
| Clone Library Name | barley_pub |
>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast| precursor Length = 374 Score = 37.0 bits (84), Expect = 0.050 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = -3 Query: 473 PSVSHNDDD----DLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPP 336 PS S N D WG P+P+S+ A P NDD WG APPP Sbjct: 85 PSASGNSRPVLVTDEWGEPGVPEPQSTSAADPPT---NDDEWGGDPAPPP 131
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 37.0 bits (84), Expect = 0.050 Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGK-ALKPAAANNDDLWGAIAAPPP 336 PAPK A A +P+ + + AAP P+ K A +PA A APP Sbjct: 85 PAPKPA---AAERPAAAERPA----AAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPS 137 Query: 335 ATKARPLASSGRGRGAKPAQPKLGAQR 255 A A A+SG GA+P PK G R Sbjct: 138 APAAPAAAASGPRPGARPGAPKPGGAR 164
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 36.6 bits (83), Expect = 0.065 Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Frame = -3 Query: 509 APKSAPKSAGIKPSVSHNDDDDLWGSIAAPQP----KSSGKALKPAAANNDDLWGAI--A 348 A +A K A KP+ S AAP+P K + A KPA A A A Sbjct: 63 AKPAAAKPAAPKPAAS-----------AAPKPGAPAKPAAPAAKPAPAAPSAASAAKPGA 111 Query: 347 APPPATKARPLASSGRGRGAKPAQP 273 AP P +A+P A++ G AKPA P Sbjct: 112 APKPGVQAKPAAAAKPGAPAKPAAP 136 Score = 30.4 bits (67), Expect = 4.6 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAA 345 P PAP + ++ KP + + AA G KPAA + +A Sbjct: 92 PAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAA----KPGAPAKPAAPAAPSAAKSGSA 147 Query: 344 PPPATKARPLASSGR-GRGAKPAQP--KLGAQ 258 P PA A+P S G AK A+P K GA+ Sbjct: 148 PKPAAAAKPAFSGPTPGDAAKKAEPAAKPGAE 179
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 35.8 bits (81), Expect = 0.11 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Frame = -3 Query: 530 WGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAA-----ANNDD 366 WG T AP A S S+ND WG A P +G A A+ ANN+D Sbjct: 36 WGETATETSAPAPPPASAPVSSSNNDG---WGEPAPSAPADNGWADAGASNGGSGANNND 92 Query: 365 LWGAIAAPPPATKARPLAS 309 W PP + + AS Sbjct: 93 GWFDAPVPPSSQPPKKEAS 111
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 35.4 bits (80), Expect = 0.14 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 14/100 (14%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKA---LKPAAANNDDLWGAIAA- 345 P P S+P +P + + AP P+S+ K + P+A D G + Sbjct: 138 PTPTSSPPKTAARPINAPISRPAIPSRPTAPTPRSANKPSSPVPPSAGGKDPRAGQTSTT 197 Query: 344 ----------PPPATKARPLASSGRGRGAKPAQPKLGAQR 255 P P +RP + + GR A PA+P + ++R Sbjct: 198 SKATTVSGGGPRPKIVSRPQSPTAPGRSAPPAKPSIPSER 237
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 35.0 bits (79), Expect = 0.19 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIA--APQPKSSGKALKPAAANNDDLWG-- 357 P+ VPA P+ A K + S N S A A QP +S L P DD+ Sbjct: 811 PSTVPATLLQPQPASSKTTSSRNVTSGAGTSSASSARQPSASASVLSPT---EDDVVSPA 867 Query: 356 -------AIAAPPPATKARPLASSGRGR--GAKPAQPKLGAQR-IGRTSS 237 + A+P PA A P GRG G +P LG + +GR S Sbjct: 868 TSPLSMLSSASPSPAKSAPPSPVKGRGSRVGVPSLKPTLGGKAVVGRPPS 917
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 33.5 bits (75), Expect = 0.55 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Frame = -3 Query: 524 PTVVPAPKSA-PKSAGIKPSVSHNDDDDLWGSIA-----APQPKSSGKALKPAAANNDDL 363 P P P +A P +A P + GS A A + +A +P +A+ L Sbjct: 740 PAASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLSRASRPLSASQPSL 799 Query: 362 WGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSS 237 + AP PA ARP +SS P+LG RT++ Sbjct: 800 PHGVPAPSPAASARPASSS---------TPRLGPAPTARTAA 832
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 33.5 bits (75), Expect = 0.55 Identities = 38/131 (29%), Positives = 53/131 (40%) Frame = -3 Query: 635 IQAAQKRPVVHPKQXXXXXXXXXXXXXXXAEEDALWGPTVVPAPKSAPKSAGIKPSVSHN 456 + AQ R VV KQ EE + + A ++A ++A K Sbjct: 138 LMEAQARDVVEAKQRAEDEARRKVE-----EEQRIAAEKMEAANRAAEEAAAAK------ 186 Query: 455 DDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQ 276 +AA QP + +A +PA+ A AAP P T ARP +++ R A PA Sbjct: 187 --------VAASQPAAEVRA-EPASERP----AAAAAPAPRTDARPQSAAAAPRSA-PAT 232 Query: 275 PKLGAQRIGRT 243 P A R RT Sbjct: 233 PDAAAPRGRRT 243
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 33.1 bits (74), Expect = 0.72 Identities = 31/97 (31%), Positives = 40/97 (41%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAA 345 P PA K KSA KP+ + A +P + A KPAA A AA Sbjct: 266 PAAKPAAKPVAKSAAAKPAAKPAAKP---AAKPAAKPAAKPVAAKPAATKPAT---APAA 319 Query: 344 PPPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSST 234 P AT + P A+S A A P G+ TS++ Sbjct: 320 KPAATPSAPAAAS----SAASATPAAGSNGAAPTSAS 352
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 32.7 bits (73), Expect = 0.94 Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 1/94 (1%) Frame = -3 Query: 527 GPTVVPAPKSAPKSAGIKPSVSHNDDDDLWG-SIAAPQPKSSGKALKPAAANNDDLWGAI 351 G T P P APK A P V +N P+P A +P A Sbjct: 157 GATPGPRPGPAPKPAARTPRVGNNPFSSAQPVDRPIPRPVPRPGAPRPGAPRP------- 209 Query: 350 AAPPPATKARPLASSGRGRGAKPAQPKLGAQRIG 249 A P RP G GR A+P P+ G R G Sbjct: 210 GASPGNMPPRPGGVGGPGRPARPGAPRPGGGRPG 243
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 32.7 bits (73), Expect = 0.94 Identities = 29/93 (31%), Positives = 35/93 (37%) Frame = -3 Query: 527 GPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIA 348 GP P PK AP+ A P + S AP P KP GA Sbjct: 124 GPRPTPGPKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGP----KPG--------GARP 171 Query: 347 APPPATKARPLASSGRGRGAKPAQPKLGAQRIG 249 P ARP + G+ RG + Q + G QR G Sbjct: 172 GAPKPGGARP-SGPGQDRGQQGGQGRPGGQRPG 203
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 32.3 bits (72), Expect = 1.2 Identities = 30/89 (33%), Positives = 36/89 (40%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAA 345 P PAP +AP +A P + G A P P ++ PAAA N GA A Sbjct: 257 PPAAPAP-AAPAAAPPPPPPAPATLARPPGHPAGP-PTAAPAVPPPAAAQNGGSAGAAPA 314 Query: 344 PPPATKARPLASSGRGRGAKPAQPKLGAQ 258 P PA S G GA A P G + Sbjct: 315 PAPAAGGPAGVSGQPGPGAAAAAPAPGVK 343
>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein| Length = 977 Score = 32.3 bits (72), Expect = 1.2 Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKA---LKPAAANNDD--LW 360 PT P +PK+A ++ S APQP + A L P AA D +W Sbjct: 869 PTPGPIASGSPKTARVQEIRRF--------STPAPQPTAEPLAPTVLAPRAATTLDEPIW 920 Query: 359 GAIAAPPPATKARPLASSGRGRGAKP-------AQPKLGAQRIG 249 A P P + RG GA P A+P+ A R G Sbjct: 921 RTELASAPVPSPAPPPEAPRGLGASPSSCGFQVARPRFSATRTG 964
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = -3 Query: 428 AAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGR------GRGAKPAQPKL 267 A P PK + KA AAA G P P P+A +G G KPA PK Sbjct: 69 AKPGPKPAAKAAPKAAAKPGPKPGPKPGPQPVKNTNPVAGAGTRPTSTVKPGEKPA-PKP 127 Query: 266 GAQRIGRTSS 237 GA+ +T++ Sbjct: 128 GAKPAPKTAA 137 Score = 29.6 bits (65), Expect = 7.9 Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 11/100 (11%) Frame = -3 Query: 524 PTVVPAPKSAPKSA---GIKPSVSHNDDDDLWGSIAAPQPKSS-----GKALKPAAANND 369 P PA K+APK+A G KP G PQP + G +P + Sbjct: 71 PGPKPAAKAAPKAAAKPGPKP-----------GPKPGPQPVKNTNPVAGAGTRPTSTVKP 119 Query: 368 DLWGAI---AAPPPATKARPLASSGRGRGAKPAQPKLGAQ 258 A A P P T A+P G G KP K GA+ Sbjct: 120 GEKPAPKPGAKPAPKTAAKPTPKPGAKPGPKPGGAKPGAK 159
>ADRB1_HUMAN (P08588) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 477 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -3 Query: 491 KSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLA 312 + A + +H D G +A P P S P AA++DD + A PPA P A Sbjct: 395 RRAARRRHATHGDRPRASGCLARPGPPPS-----PGAASDDDDDDVVGATPPARLLEPWA 449 Query: 311 SSGRGRGA 288 G A Sbjct: 450 GCNGGAAA 457
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Frame = -3 Query: 539 DALWGPTVVPAPK----SAPKSAG---IKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAA 381 D GP V PA +AP A +P+ D WG AP ++G+ P Sbjct: 285 DPWGGPAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAP---AAGEGPTPDP 341 Query: 380 ANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRIG 249 + D ++ PP + P + G PA+P +G Sbjct: 342 WGSSDGGAPVSGPPSSDPWAPAPAFSDPWGGSPAKPSSNGTAVG 385
>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 245 Score = 31.6 bits (70), Expect = 2.1 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAA 345 P P +SAP + G PS S L + P+ S ++DD W Sbjct: 34 PNSEPVVRSAPAAGGPPPSCSLL----LRQWLHVPESASDD--------DDDDDWPDSPP 81 Query: 344 PPPATKARPLAS----------SGRGRGAKPAQP 273 P PA +ARP A+ +G G GA P+ P Sbjct: 82 PEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHP 115
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Frame = -3 Query: 524 PTVVPAPKSA-PKSAGIKPSVSHNDDDDLWGSIA-----APQPKSSGKALKPAAANNDDL 363 P P P +A P +A P + GS A A + +A +P +A+ L Sbjct: 740 PAASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLSRASRPLSASQPSL 799 Query: 362 WGAIAAPPPATKARPLASSGRGRGAKP 282 AP PA ARP +SS G P Sbjct: 800 PHGAPAPSPAASARPASSSTPRLGPAP 826
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/79 (26%), Positives = 31/79 (39%) Frame = -3 Query: 506 PKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATK 327 P + P + KP + G++AAP+P + A A P PA Sbjct: 70 PAAKPGAPAPKPGTAQKPTAPTPGAVAAPKPGT-----------------AAAKPTPAKP 112 Query: 326 ARPLASSGRGRGAKPAQPK 270 A P ++ + AKP PK Sbjct: 113 AAPKPTAAKPAPAKPTAPK 131
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 31.2 bits (69), Expect = 2.7 Identities = 31/114 (27%), Positives = 48/114 (42%) Frame = -3 Query: 539 DALWGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLW 360 D + P P + P +P +++ AA P++ A AA D Sbjct: 359 DCTYPPDAEPKDDAFPLYGDFQPPALKIKEEEEAAEAAARSPRTYLVAGANPAAFPDF-- 416 Query: 359 GAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSSTGM*SAMIQLLYK 198 +AAPPP + + SS G A A P G+ + +SS+G S + +LYK Sbjct: 417 -QLAAPPPPSLPPRVPSSRPGEAAVAASP--GSASVSSSSSSG--STLECILYK 465
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPA 333 P+P+ P G VS + G P+SSG+A +P AA + + +PP A Sbjct: 371 PSPRR-PAGPGPLSFVSSSSAQVSSGPGGGGLPQSSGRAARPRAA----VAPRVRSPPRA 425 Query: 332 TKARPLASSGRGRGAKPAQPKLGAQRIGRTSST 234 A +++S G P + A R R+ T Sbjct: 426 AAAPVVSASADAAGPAPPAVPVDAHRAPRSRMT 458
>SPTN2_HUMAN (O15020) Spectrin beta chain, brain 2 (Spectrin, non-erythroid beta| chain 2) (Beta-III spectrin) Length = 2390 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = -3 Query: 425 APQPKSS---GKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQR 255 AP+P +S G + A++ G PPP+T+A + +G +P+QP LG QR Sbjct: 2100 APEPTASVPPGDLVGGQTASDTTWDGTQPRPPPSTQAPSV--NGVCTDGEPSQPLLGQQR 2157 Query: 254 IGRTS 240 + +S Sbjct: 2158 LEHSS 2162
>XYLD_MORMO (Q59545) D-xylulose reductase (EC 1.1.1.9) (Xylitol dehydrogenase)| (XDH) Length = 338 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +1 Query: 379 AAAGFKAFPDD--FG*GAAIEPQRSSSSLCDTEGLMPADFGALLGAGT 516 AA FK PD+ F GA +EP G+ P D G ++GAGT Sbjct: 132 AAFTFK-LPDNVSFAQGAMVEPLAIGMQSATKAGIKPGDIGLVIGAGT 178
>KCNH3_HUMAN (Q9ULD8) Potassium voltage-gated channel subfamily H member 3| (Voltage-gated potassium channel subunit Kv12.2) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Brain-specific eag-like channel 1) (BEC1) Length = 1083 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = -3 Query: 545 EEDALWGPTVVPAPKSAPKSAGIKPSVSHNDDDD--LWGSIAAPQPKSSGKALKPAAANN 372 E D GPTV PAP P S + P + + L AP+P+ G+ +P A Sbjct: 732 ETDGEQGPTVSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRG-RPGRAGA 790 Query: 371 DDLWGAIAAPPPA 333 +APP A Sbjct: 791 LKAEAGPSAPPRA 803
>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 252 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = -3 Query: 479 IKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGR 300 + S S +DDDD W P+P +P A AAP P + P +G Sbjct: 70 VPESASDDDDDDDWPDSPPPEPAPEA---RPTA----------AAPRPRS---PPPGAGP 113 Query: 299 GRGAKPAQP 273 G GA P+ P Sbjct: 114 GGGADPSHP 122
>QA1F_NEUCR (P11638) Quinic acid utilization activator| Length = 816 Score = 30.4 bits (67), Expect = 4.6 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 14/92 (15%) Frame = -3 Query: 506 PKSAPKSAGIKP-------SVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAI- 351 P +A +A I P S S N +D + I P P +S AL ND +G++ Sbjct: 655 PPTATATASIMPHVMEQPLSTSINPVNDRFNGIPNPTPYNSDAALDAITQTND--YGSVN 712 Query: 350 ------AAPPPATKARPLASSGRGRGAKPAQP 273 PPPAT + + GA P P Sbjct: 713 THGILSTYPPPATHLNEASVALAPGGAPPRPP 744
>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 263 Score = 30.4 bits (67), Expect = 4.6 Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 17/101 (16%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALK----PAAANNDDL-- 363 P PA +SAP +A P S P P S + P +A++DD Sbjct: 33 PNSEPAVRSAPAAAPPPPPAS------------GPPPSCSLLLRQWLHVPESASDDDDDD 80 Query: 362 -WGAIAAPPPATKARPLAS----------SGRGRGAKPAQP 273 W P PA +ARP A+ +G G GA P+ P Sbjct: 81 DWPDSPPPEPAPEARPTAAAPRPRSPPPGAGPGGGANPSHP 121
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/66 (34%), Positives = 28/66 (42%) Frame = -3 Query: 500 SAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKAR 321 +AP AG P D + AAP P A P A D+L+ A+ PA R Sbjct: 17 AAPDLAGRAP--------DSEAARAAPTPSGPPAAAAPPGAPGDELYAALEDYHPAELYR 68 Query: 320 PLASSG 303 LA SG Sbjct: 69 ALAVSG 74
>TRP_DROME (P19334) Transient receptor potential protein| Length = 1275 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/83 (30%), Positives = 31/83 (37%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPA 333 P S P + G KP D AP+P+++G KP + D AP P Sbjct: 1017 PPKDSKPSAGGPKPG-----DQKPTPGAGAPKPQAAGTISKPGESQKKD------APAPP 1065 Query: 332 TKARPLASSGRGRGAKPAQPKLG 264 TK KPA PK G Sbjct: 1066 TKP---------GDTKPAAPKPG 1079
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Frame = -3 Query: 542 EDALWGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDL 363 +DALW T S+ + G +P +P P S + + PA L Sbjct: 73 QDALWIST------SSAGAGGAEPPA------------LSPAPASPARPVSPAPGRRLSL 114 Query: 362 WGAIAAPP--------------PATKARPLASSGRGRGAKP 282 W A PP P++ RPL SS G +P Sbjct: 115 WAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEP 155
>PARG_RAT (Q9QYM2) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)| Length = 972 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +2 Query: 338 AGVLQWHPIGRHYSLLLASKPSQMILAEVQLLN 436 AGV +WH G L AS+PS + A QL N Sbjct: 150 AGVCKWHSAGERAEQLSASEPSAVTQAPKQLSN 182
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -3 Query: 527 GPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQ--PKSSGKALKPAAANNDDLWGA 354 GPT+ P+P S P ++ P A P P SS + AA+++ + Sbjct: 349 GPTLAPSPHSLPPASSSAP--------------APPMRFPYSSSSSSSAAASSSSSSSSS 394 Query: 353 IAAPPPATKARP 318 A+P PA++A P Sbjct: 395 SASPFPASQALP 406
>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -3 Query: 419 QPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRI 252 QP+ A + + + APPP P A R R A+PA P GA ++ Sbjct: 2 QPRGERPAGRTQSPEHSSPGPGPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57
>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -3 Query: 419 QPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRI 252 QP+ A + + + APPP P A R R A+PA P GA ++ Sbjct: 2 QPRGERPAGRTQSPEHSSPGPGPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 30.0 bits (66), Expect = 6.1 Identities = 29/83 (34%), Positives = 37/83 (44%) Frame = -3 Query: 428 AAPQPKSSGKALKPAAANNDDLWGAIAAPPPATKARPLASSGRGRGAKPAQPKLGAQRIG 249 +AP+P S K+ +P+AA + D AP P + P R AKPAQP L Q + Sbjct: 2187 SAPKP-SITKSPEPSAATSRDS-PQPPAPQPVPEKIPEPKPEPVRAAKPAQPPLALQ-MP 2243 Query: 248 RTSSTGM*SAMIQLLYKDATFSP 180 S T M L T SP Sbjct: 2244 AQSLTPYAQIMQSLQLSSPTLSP 2266
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Frame = -3 Query: 542 EDALWGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDL 363 +DALW T S+ + G +P +P P S + + PA L Sbjct: 73 QDALWIST------SSAGAGGAEPPA------------LSPAPASPARPVSPAPGRRLSL 114 Query: 362 WGAIAAPP--------------PATKARPLASSGRGRGAKP 282 W A PP P++ RPL SS G +P Sbjct: 115 WAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEP 155
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Frame = -3 Query: 542 EDALWGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDL 363 +DALW T S+ + G +P +P P S + + PA L Sbjct: 73 QDALWIST------SSAGTGGAEPPA------------LSPAPASPARPVSPAPGRRLSL 114 Query: 362 WGAIAAPP--------------PATKARPLASSGRGRGAKP 282 W A PP P++ RPL SS G +P Sbjct: 115 WAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEP 155
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -3 Query: 527 GPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQ--PKSSGKALKPAAANNDDLWGA 354 GPT+ P+P S P ++ P A P P SS + AA+++ + Sbjct: 348 GPTLAPSPHSLPPASSSAP--------------APPMRFPYSSSSSSSAAASSSSSSSSS 393 Query: 353 IAAPPPATKARP 318 A+P PA++A P Sbjct: 394 SASPFPASQALP 405
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQP---KSSGKALKPAAANNDDLWGAIAAP 342 PA ++ P +G DDD G + P P +S A AA D A AAP Sbjct: 1369 PAEQTEPPPSGTPGPDDARDDDHEGGPVEGPGPLPSPASATATAAPAAPEDAATSAAAAP 1428 Query: 341 ---PPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSSTG 231 P A + P S+ A P +P G + G Sbjct: 1429 GEGPAAPSSAPPPSNSSSSSA-PRRPSSLQSLFGLPEAAG 1467
>CD248_HUMAN (Q9HCU0) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 757 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -3 Query: 536 ALWGPTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQP 414 ALW P+ PAP +AP + G H+ DD W +A P Sbjct: 656 ALWLPS--PAPTAAPTALGEAGLAEHSQRDDRWLLVALLVP 694
>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)| Length = 575 Score = 29.6 bits (65), Expect = 7.9 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 10/91 (10%) Frame = -3 Query: 509 APKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPK------SSGKALKPAAANNDDLWGAIA 348 A + + + G K S D D++ + A PQ +S P AA D WGA A Sbjct: 241 AIEESKRETGGKEESSLMDLADVFTTPAPPQASDPWGGPASVPTAVPVAAAASDPWGAPA 300 Query: 347 APPPATK---ARPLASSG-RGRGAKPAQPKL 267 PP A A P +SG R A P P + Sbjct: 301 VPPAADPWGGAAPTPASGDPWRPAAPTGPSV 331
>UPC2_YEAST (Q12151) Sterol uptake control protein 2 (Mannoprotein regulation| by oxygen protein 4) Length = 913 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = -1 Query: 640 LTYKLPRSVRWCIRSNQFQVHQDQIRQRHRKQRRMLYGALRLFQHPKAHRSLQASNPRYR 461 L ++P + + Q+Q+HQ Q+H++ + Y LR QH + + Q +Y+ Sbjct: 277 LCNRIPSGQNYTQQQLQYQLHQQLQLQQHQQVQLQQYQQLRQEQHQQVQQQQQEQLQQYQ 336
>SNI2_YEAST (P38163) Protein SNI2 (Suppressor of RHO3 protein 77)| Length = 1010 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = -3 Query: 449 DDLWGSIAAPQPKSSGKALKPAAANNDDLWGAIAAPPPATK----ARPLASSGRGRG 291 D+L G I P+ K A+ ++ A PP TK ARP+ SSGR G Sbjct: 904 DELLGGIERPESKYEESAIARGCISSSSS-NAARKLPPGTKDHRYARPVRSSGRSNG 959
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 29.6 bits (65), Expect = 7.9 Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Frame = -3 Query: 512 PAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALKPAAANNDDLWG-------A 354 PAPK A K KP S + AAP+P A KPAA ++ A Sbjct: 108 PAPKPAAKPVP-KPGFSAAKAESSAPKPAAPKPA----APKPAAQSSTTATPGSMPRPQA 162 Query: 353 IAAPPPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSSTG 231 AP P +A +A++ G +PA G R G G Sbjct: 163 KPAPKPGGRAPRVANNPFSSGPRPAPRPGGGNRSGNAPRPG 203
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 29.6 bits (65), Expect = 7.9 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 5/99 (5%) Frame = -3 Query: 515 VPAPKSAPKSAGIKPSVSHNDDDDLWG-----SIAAPQPKSSGKALKPAAANNDDLWGAI 351 V K+ S G + VS +D + S P+SSGK ++ D Sbjct: 443 VSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSLGT 502 Query: 350 AAPPPATKARPLASSGRGRGAKPAQPKLGAQRIGRTSST 234 A PP A KA P G+G + K G G+ + T Sbjct: 503 AGPPSAVKAEPATG---GKGDPLSSEKAGLVASGKAAPT 538
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 18/102 (17%) Frame = -3 Query: 524 PTVVPAPKSAPKSAGIKPSVSHNDDDDLWGSIAAPQPKSSGKALK-----PAAANNDDL- 363 P PA +SAP +A P A P S L+ P +A++DD Sbjct: 33 PNSEPAVRSAPAAAPPPPP-------------AGGPPPSCSLLLRQWLHVPESASDDDDD 79 Query: 362 --WGAIAAPPPATKARPLASS----------GRGRGAKPAQP 273 W P PA +ARP A++ G G GA P+ P Sbjct: 80 DDWPDSPPPEPAPEARPTAAAPRPRPPPPGVGPGGGADPSHP 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,367,708 Number of Sequences: 219361 Number of extensions: 2329952 Number of successful extensions: 6735 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 6272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6696 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
