| Clone Name | rbags27o11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 466 bits (235), Expect = e-128 Identities = 443/511 (86%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 1072 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 1013 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 1012 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 953 Query: 261 ccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactccaaaaccaacag 320 | || ||||| ||||||||||||||||| |||||||||||||| | || || ||||||| Sbjct: 952 ctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaacccaacag 893 Query: 321 caacagctttatccgtggcctgcttgatttccttaagaagagcttccaccttgaaactta 380 | |||||||| |||||| |||||||||| |||| ||||||| || ||||||| ||| | Sbjct: 892 ccacagctttgtccgtgacctgcttgatatcctggagaagagattgcaccttgccactga 833 Query: 381 cgtttgcacgggtgccagtaactccagtagtgcttacaagataaacaaatccttctgaag 440 | |||||||| | || ||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 832 catttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaag 773 Query: 441 cctttgtaattctctccattctttctgttggtgtagttggtgttgttagtaacaccagct 500 | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 772 cttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagct 713 Query: 501 caaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagaggaacatcag 560 ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 712 caaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagaggaacatcag 653 Query: 561 gtaccacaagaccatgtacacccggcgtctttcacaacagacatgaagttggcgacaccg 620 |||||||||||||||| ||| ||||| ||||| ||||||| ||||||||| |||| || Sbjct: 652 gtaccacaagaccatggaca-ccggcttcttttacaacagtcatgaagtttgcgatgcca 594 Query: 621 cgcttcagaatcgggttgtaatacgtgaaaa 651 ||||||||||||||||| ||||| ||||||| Sbjct: 593 cgcttcagaatcgggttataatatgtgaaaa 563
>ref|XM_506200.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_G02.1 patrial mRNA Length = 1161 Score = 466 bits (235), Expect = e-128 Identities = 443/511 (86%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 1073 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 1014 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 1013 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 954 Query: 261 ccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactccaaaaccaacag 320 | || ||||| ||||||||||||||||| |||||||||||||| | || || ||||||| Sbjct: 953 ctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaacccaacag 894 Query: 321 caacagctttatccgtggcctgcttgatttccttaagaagagcttccaccttgaaactta 380 | |||||||| |||||| |||||||||| |||| ||||||| || ||||||| ||| | Sbjct: 893 ccacagctttgtccgtgacctgcttgatatcctggagaagagattgcaccttgccactga 834 Query: 381 cgtttgcacgggtgccagtaactccagtagtgcttacaagataaacaaatccttctgaag 440 | |||||||| | || ||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 833 catttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaag 774 Query: 441 cctttgtaattctctccattctttctgttggtgtagttggtgttgttagtaacaccagct 500 | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 773 cttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagct 714 Query: 501 caaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagaggaacatcag 560 ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 713 caaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagaggaacatcag 654 Query: 561 gtaccacaagaccatgtacacccggcgtctttcacaacagacatgaagttggcgacaccg 620 |||||||||||||||| ||| ||||| ||||| ||||||| ||||||||| |||| || Sbjct: 653 gtaccacaagaccatggaca-ccggcttcttttacaacagtcatgaagtttgcgatgcca 595 Query: 621 cgcttcagaatcgggttgtaatacgtgaaaa 651 ||||||||||||||||| ||||| ||||||| Sbjct: 594 cgcttcagaatcgggttataatatgtgaaaa 564
>dbj|AK104002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G11, full insert sequence Length = 1256 Score = 466 bits (235), Expect = e-128 Identities = 443/511 (86%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 1072 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 1013 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 1012 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 953 Query: 261 ccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactccaaaaccaacag 320 | || ||||| ||||||||||||||||| |||||||||||||| | || || ||||||| Sbjct: 952 ctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaacccaacag 893 Query: 321 caacagctttatccgtggcctgcttgatttccttaagaagagcttccaccttgaaactta 380 | |||||||| |||||| |||||||||| |||| ||||||| || ||||||| ||| | Sbjct: 892 ccacagctttgtccgtgacctgcttgatatcctggagaagagattgcaccttgccactga 833 Query: 381 cgtttgcacgggtgccagtaactccagtagtgcttacaagataaacaaatccttctgaag 440 | |||||||| | || ||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 832 catttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaag 773 Query: 441 cctttgtaattctctccattctttctgttggtgtagttggtgttgttagtaacaccagct 500 | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 772 cttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagct 713 Query: 501 caaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagaggaacatcag 560 ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 712 caaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagaggaacatcag 653 Query: 561 gtaccacaagaccatgtacacccggcgtctttcacaacagacatgaagttggcgacaccg 620 |||||||||||||||| ||| ||||| ||||| ||||||| ||||||||| |||| || Sbjct: 652 gtaccacaagaccatggaca-ccggcttcttttacaacagtcatgaagtttgcgatgcca 594 Query: 621 cgcttcagaatcgggttgtaatacgtgaaaa 651 ||||||||||||||||| ||||| ||||||| Sbjct: 593 cgcttcagaatcgggttataatatgtgaaaa 563
>dbj|AK066734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I01, full insert sequence Length = 1257 Score = 466 bits (235), Expect = e-128 Identities = 443/511 (86%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 1073 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 1014 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 1013 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 954 Query: 261 ccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactccaaaaccaacag 320 | || ||||| ||||||||||||||||| |||||||||||||| | || || ||||||| Sbjct: 953 ctgcgccccatcccgcaatctgcttcacatgctctggagtcgatataccgaacccaacag 894 Query: 321 caacagctttatccgtggcctgcttgatttccttaagaagagcttccaccttgaaactta 380 | |||||||| |||||| |||||||||| |||| ||||||| || ||||||| ||| | Sbjct: 893 ccacagctttgtccgtgacctgcttgatatcctggagaagagattgcaccttgccactga 834 Query: 381 cgtttgcacgggtgccagtaactccagtagtgcttacaagataaacaaatccttctgaag 440 | |||||||| | || ||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 833 catttgcacgtgcacctgtaactccaacagtgcttacaagataaataaatccttcagaag 774 Query: 441 cctttgtaattctctccattctttctgttggtgtagttggtgttgttagtaacaccagct 500 | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 773 cttttgtaattttctccattctttctgttggtgtagttggtgttgtcagtagcaccagct 714 Query: 501 caaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagaggaacatcag 560 ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||| Sbjct: 713 caaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagaggaacatcag 654 Query: 561 gtaccacaagaccatgtacacccggcgtctttcacaacagacatgaagttggcgacaccg 620 |||||||||||||||| ||| ||||| ||||| ||||||| ||||||||| |||| || Sbjct: 653 gtaccacaagaccatggaca-ccggcttcttttacaacagtcatgaagtttgcgatgcca 595 Query: 621 cgcttcagaatcgggttgtaatacgtgaaaa 651 ||||||||||||||||| ||||| ||||||| Sbjct: 594 cgcttcagaatcgggttataatatgtgaaaa 564
>gb|AY107255.1| Zea mays PCO145511 mRNA sequence Length = 769 Score = 333 bits (168), Expect = 4e-88 Identities = 418/500 (83%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 152 aatgcggcctttaggctcttggctaattcttccagcttcttcaacccttcttcaggagag 211 ||||||||||| ||| ||||||| || ||||| ||||||||||| |||||||| ||||| Sbjct: 607 aatgcggccttcaggttcttggcgaactcttctagcttcttcaatccttcttctggagaa 548 Query: 212 cctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 | | ||| ||||| | ||| || |||||| |||| ||||||||||| || ||||| Sbjct: 547 gcagcttcctccaacgtcttcatcactgcgctaccgataatcacaccatctgcgccccat 488 Query: 272 cccgcaatctgcttcacctgctctggagtcgacactccaaaaccaacagcaacagcttta 331 || ||||||||| || ||||||||||||||||| ||||| |||||||| || | ||| Sbjct: 487 cctgcaatctgccggacatgctctggagtcgacacaccaaagccaacagccacgggtttt 428 Query: 332 tccgtggcctgcttgatttccttaagaagagcttccaccttgaaacttacgtttgcacgg 391 || || ||| |||||| |||| |||||||| || ||||||| ||||| |||||||| Sbjct: 427 tctgtcaccttcttgatatcctgaagaagagattgcaccttgccgcttacatttgcacgt 368 Query: 392 gtgccagtaactccagtagtgcttacaagataaacaaatccttctgaagcctttgtaatt 451 || |||||||||||| ||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 367 gtaccagtaactccaacagtgcttacaagataaataaatccttctgaagcctgtgcaatt 308 Query: 452 ctctccattctttctgttggtgtagttggtgttgttagtaacaccagctcaaggttgttc 511 ||||||||||||| |||||||||| |||||||| | || ||||||||| |||||||| Sbjct: 307 ttctccattctttcatttggtgtagtcggtgttgtcaatagcaccagctctaggttgttt 248 Query: 512 ttggcagcctcgcttctcaaaatatccgtctcttccagaggaacatcaggtaccacaaga 571 ||||||||||| || ||||| | ||| |||||||||| ||||||||| |||||||||||| Sbjct: 247 ttggcagcctcactcctcaagacatctgtctcttccaaaggaacatctggtaccacaaga 188 Query: 572 ccatgtacacccggcgtctttcacaacagacatgaagttggcgacaccgcgcttcagaat 631 || ||||| ||| || ||||| |||| | ||||||||||| |||||| |||||||| || Sbjct: 187 ccgtgtac-cccagcttctttaacaatactcatgaagttggggacaccacgcttcaggat 129 Query: 632 cgggttgtaatacgtgaaaa 651 |||||||||||| ||||||| Sbjct: 128 cgggttgtaatatgtgaaaa 109
>dbj|AK102456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B09, full insert sequence Length = 2873 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Minus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 2690 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 2631 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 2630 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 2571 Query: 261 ccgcaccccaccccgcaatctgcttcacctgctctggagtcga 303 | || ||||| ||||||||||||||||| |||||||||||||| Sbjct: 2570 ctgcgccccatcccgcaatctgcttcacatgctctggagtcga 2528
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 4362839 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 4362898 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 4362899 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 4362958 Query: 261 ccgcaccccaccccgcaatctg 282 | || ||||| ||||||||||| Sbjct: 4362959 ctgcgccccatcccgcaatctg 4362980 Score = 113 bits (57), Expect = 7e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 |||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||| Sbjct: 4363550 acaagataaataaatccttcagaagcttttgtaattttctccattctttctgttggtgta 4363609 Query: 476 gttggtgttgttagtaacacc 496 ||||||||||| |||| |||| Sbjct: 4363610 gttggtgttgtcagtagcacc 4363630 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 494 accagctcaaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagagga 553 |||||||||||||||||||| ||||| || || |||||||||| ||||||||||||||| Sbjct: 4363948 accagctcaaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagagga 4364007 Query: 554 acatcaggtaccacaagacc 573 |||||||||||||||||||| Sbjct: 4364008 acatcaggtaccacaagacc 4364027 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 582 ccggcgtctttcacaacagacatgaagttggcgacaccgcgcttcagaatcgggttgtaa 641 ||||| ||||| ||||||| ||||||||| |||| || ||||||||||||||||| ||| Sbjct: 4364424 ccggcttcttttacaacagtcatgaagtttgcgatgccacgcttcagaatcgggttataa 4364483 Query: 642 tacgtgaaaa 651 || ||||||| Sbjct: 4364484 tatgtgaaaa 4364493 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacagctttatccgtg 337 ||||||||| |||||||||||||| | || || |||||||| |||||||| |||||| Sbjct: 4363072 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtccgtg 4363129
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 2688 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 2747 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 2748 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 2807 Query: 261 ccgcaccccaccccgcaatctg 282 | || ||||| ||||||||||| Sbjct: 2808 ctgcgccccatcccgcaatctg 2829 Score = 113 bits (57), Expect = 7e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 |||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||| Sbjct: 3399 acaagataaataaatccttcagaagcttttgtaattttctccattctttctgttggtgta 3458 Query: 476 gttggtgttgttagtaacacc 496 ||||||||||| |||| |||| Sbjct: 3459 gttggtgttgtcagtagcacc 3479 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 494 accagctcaaggttgttcttggcagcctcgcttctcaaaatatccgtctcttccagagga 553 |||||||||||||||||||| ||||| || || |||||||||| ||||||||||||||| Sbjct: 3797 accagctcaaggttgttcttagcagcttcactcctcaaaatatttgtctcttccagagga 3856 Query: 554 acatcaggtaccacaagacc 573 |||||||||||||||||||| Sbjct: 3857 acatcaggtaccacaagacc 3876 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 582 ccggcgtctttcacaacagacatgaagttggcgacaccgcgcttcagaatcgggttgtaa 641 ||||| ||||| ||||||| ||||||||| |||| || ||||||||||||||||| ||| Sbjct: 4273 ccggcttcttttacaacagtcatgaagtttgcgatgccacgcttcagaatcgggttataa 4332 Query: 642 tacgtgaaaa 651 || ||||||| Sbjct: 4333 tatgtgaaaa 4342 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacagctttatccgtg 337 ||||||||| |||||||||||||| | || || |||||||| |||||||| |||||| Sbjct: 2921 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtccgtg 2978
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 141 tgtttcatggaaatgcggcctttaggctcttggctaattcttccagcttcttcaaccctt 200 ||||||| || ||||| ||||| ||||||||||||| ||||| ||||||||||| |||| Sbjct: 183893 tgtttcagggcaatgcagccttcaggctcttggctagctcttctagcttcttcaatcctt 183952 Query: 201 cttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacgatcacaccat 260 |||| || || | | ||||||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 183953 cttcgggtgaagcagcttcgcccaattgcctcaccatagcgctcccaatgatcacaccat 184012 Query: 261 ccgcaccccaccccgcaatctg 282 | || ||||| ||||||||||| Sbjct: 184013 ctgcgccccatcccgcaatctg 184034 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacagctttatccgtg 337 ||||||||| |||||||||||||| | || || |||||||| |||||||| |||||| Sbjct: 184126 ctgcttcacatgctctggagtcgatataccgaacccaacagccacagctttgtccgtg 184183
>gb|AY462226.1| Hordeum lechleri indole-3-glycerol phosphate lyase mRNA, partial cds Length = 979 Score = 93.7 bits (47), Expect = 7e-16 Identities = 140/171 (81%) Strand = Plus / Minus Query: 191 ttcaacccttcttcaggagagcctgattcgcccaactgcctcaccattgcgctcccgacg 250 |||||||||||||| ||||| ||| ||| || |||||| |||||||||| || |||| | Sbjct: 797 ttcaacccttcttctggagaagctgcttcacctaactgcttcaccattgcactgccgatg 738 Query: 251 atcacaccatccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactcca 310 ||||| ||||| ||||||||| | ||||||||||| || || || || ||||| | |||| Sbjct: 737 atcactccatctgcaccccactctgcaatctgcttaacatggtcaggggtcgaaattcca 678 Query: 311 aaaccaacagcaacagctttatccgtggcctgcttgatttccttaagaaga 361 || |||||||| || || || || ||| ||||||| || | |||||||||| Sbjct: 677 aagccaacagccactgccttgtcagtgacctgcttaatcttcttaagaaga 627
>ref|NM_185069.1| Oryza sativa (japonica cultivar-group), mRNA Length = 995 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 239 gcgctcccgacgatcacaccatccgcaccccaccccgcaatctgcttcacctgctctgga 298 ||||| |||| |||||||||||| || ||||| || ||||||||||| || ||||||||| Sbjct: 746 gcgctgccgatgatcacaccatctgctccccagcctgcaatctgctttacatgctctgga 687 Query: 299 gtcgacactccaaaaccaacagcaacagctttatccgtggcctgcttgatttccttaaga 358 ||||| | ||||| ||||||||||||| ||| || || ||| |||||| |||| |||| Sbjct: 686 gtcgatatgccaaagccaacagcaacaggtttgtctgtaaccttcttgatctcctgaaga 627 Query: 359 ag 360 || Sbjct: 626 ag 625 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 413 cttacaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggt 472 ||||||||||||| ||||||||||||||| |||| ||| || ||| || ||||||||| Sbjct: 572 cttacaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggt 513 Query: 473 gtagttggtgttgttagtaacaccagctc 501 || ||||||||||| || | ||||||||| Sbjct: 512 gtggttggtgttgtaagcagcaccagctc 484 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 539 gtctcttccagaggaacatcaggtaccacaagaccatgtac 579 |||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 446 gtctcttccaaaggaagatcaggtactacaagaccatgtac 406
>dbj|AK073440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F03, full insert sequence Length = 1284 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 239 gcgctcccgacgatcacaccatccgcaccccaccccgcaatctgcttcacctgctctgga 298 ||||| |||| |||||||||||| || ||||| || ||||||||||| || ||||||||| Sbjct: 914 gcgctgccgatgatcacaccatctgctccccagcctgcaatctgctttacatgctctgga 855 Query: 299 gtcgacactccaaaaccaacagcaacagctttatccgtggcctgcttgatttccttaaga 358 ||||| | ||||| ||||||||||||| ||| || || ||| |||||| |||| |||| Sbjct: 854 gtcgatatgccaaagccaacagcaacaggtttgtctgtaaccttcttgatctcctgaaga 795 Query: 359 ag 360 || Sbjct: 794 ag 793 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 413 cttacaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggt 472 ||||||||||||| ||||||||||||||| |||| ||| || ||| || ||||||||| Sbjct: 740 cttacaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggt 681 Query: 473 gtagttggtgttgttagtaacaccagctc 501 || ||||||||||| || | ||||||||| Sbjct: 680 gtggttggtgttgtaagcagcaccagctc 652 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 539 gtctcttccagaggaacatcaggtaccacaagaccatgtac 579 |||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 614 gtctcttccaaaggaagatcaggtactacaagaccatgtac 574
>gb|AF271383.1|AF271383 Zea mays indole-3-glycerol phosphate lyase (Igl) gene, complete cds; and putative tryptophan synthase alpha (TSAlike) gene, partial cds Length = 6644 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 189 tcttcaacccttcttcaggagagcctgattcgcccaactgcctcaccattgcgctcccga 248 ||||||| ||||| | |||||| ||| |||||| ||||| |||||||||||||| || | Sbjct: 1809 tcttcaatccttccttgggagaggctgcttcgcctaactgtctcaccattgcgctaccaa 1750 Query: 249 cgatcacaccatccgcaccccaccccgcaatctg 282 |||||||||||| ||||||||| | |||||||| Sbjct: 1749 tgatcacaccatctgcaccccactctgcaatctg 1716
>gb|BT009176.1| Triticum aestivum clone wl1n.pk0109.d5:fis, full insert mRNA sequence Length = 1041 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 217 ttcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgc 276 |||||||| |||||||||||| ||||| |||| |||||| || || || |||||| ||| Sbjct: 558 ttcgcccagctgcctcaccatggcgctgccgatgatcaccccgtcagcgccccactgcgc 499 Query: 277 aatctgcttcacctgctctgg 297 |||||||||||| |||||||| Sbjct: 498 aatctgcttcacgtgctctgg 478
>gb|AY104439.1| Zea mays PCO064449 mRNA sequence Length = 1504 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 217 ttcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgc 276 |||||||| |||||||||||| ||||| |||| |||||| || || || |||||| ||| Sbjct: 1027 ttcgcccagctgcctcaccatggcgctgccgatgatcaccccgtcagcgccccactgcgc 968 Query: 277 aatctgcttcacctgctctgg 297 |||||||||||| |||||||| Sbjct: 967 aatctgcttcacgtgctctgg 947
>gb|AY254104.1| Zea mays clone ASJ-Bx1.2 indole synthase mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 217 ttcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgc 276 |||||||| |||||||||||| ||||| |||| |||||| || || || |||||| ||| Sbjct: 972 ttcgcccagctgcctcaccatggcgctgccgatgatcaccccgtcagcgccccactgcgc 913 Query: 277 aatctgcttcacctgctc 294 |||||||||||| ||||| Sbjct: 912 aatctgcttcacgtgctc 895
>dbj|AB124849.1| Triticum aestivum TaBx1-B mRNA for Indole synthase, complete cds Length = 1308 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 224 aactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatctgc 283 |||||||||||||| || || || | |||||| ||||||||||||||||| ||||||||| Sbjct: 927 aactgcctcaccatcgcactgccaatgatcaccccatccgcaccccaccctgcaatctgc 868 Query: 284 tt 285 || Sbjct: 867 tt 866 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 431 ccttctgaagcctttgtaattctctccattctttctgttggtgtagttggtgttgttagt 490 ||||||||||| || || ||| || |||||||||| |||| | | ||||||||| || Sbjct: 720 ccttctgaagctttcgtgatttccttcattctttcttctggtatggctggtgttgtgagc 661 Query: 491 aacaccagctcaaggttgttctt 513 | ||||||||| ||||||||||| Sbjct: 660 agcaccagctcgaggttgttctt 638
>dbj|AB094060.1| Triticum aestivum TaBx1-A mRNA for indole synthase, complete cds Length = 1315 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatc 280 ||||||||||||||||| || || || | |||||| |||||||||||||| || |||||| Sbjct: 922 cccaactgcctcaccatcgcactgccaatgatcaccccatccgcaccccatcctgcaatc 863 Query: 281 tgctt 285 ||||| Sbjct: 862 tgctt 858 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 431 ccttctgaagcctttgtaattctctccattctttctgttggtgtagttggtgttgttagt 490 ||||| ||||| || || |||| || |||||||||| |||| | | ||||||||| || Sbjct: 712 ccttccgaagctttcgtgattcccttcattctttcttctggtatggctggtgttgtgagc 653 Query: 491 aacaccagctcaaggttgttctt 513 | ||||||||| ||||||||||| Sbjct: 652 agcaccagctcgaggttgttctt 630
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 |||||||||| ||||||||||||||| |||| ||| || ||| || ||||||||||| Sbjct: 32891752 acaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgtg 32891811 Query: 476 gttggtgttgt 486 ||||||||||| Sbjct: 32891812 gttggtgttgt 32891822 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcacccca 270 ||||||||||||||||||||||| || | |||||| ||||| |||||||| Sbjct: 32922881 cccaactgcctcaccattgcgctgccaatgatcactccatctgcacccca 32922930 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 226 ctgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatctgc 283 ||||||||||||||| ||||| | |||||| ||||| ||||||||||| || |||||| Sbjct: 32904268 ctgcctcaccattgcactcccaatgatcactccatctgcaccccaccctgctatctgc 32904325 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 |||| ||||||||||||||| || || | |||||| ||||| ||||||||| Sbjct: 32910959 cccagctgcctcaccattgcactgccaatgatcaccccatctgcaccccac 32911009 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacag 326 |||||| || |||||||||||||| | ||||| ||||||||||||| Sbjct: 32891109 ctgctttacatgctctggagtcgatatgccaaagccaacagcaacag 32891155 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 ttacaagataaacaaatccttctgaagcc 442 |||| ||||||||||||||| |||||||| Sbjct: 32923292 ttaccagataaacaaatcctcctgaagcc 32923320 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 413 cttacaagataaacaaatccttctgaagc 441 |||||||| |||||||||||| ||||||| Sbjct: 32904690 cttacaaggtaaacaaatcctcctgaagc 32904718 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 239 gcgctcccgacgatcacaccatccgcaccccaccccgcaatctg 282 ||||| |||| |||||||||||| || ||||| || |||||||| Sbjct: 32890988 gcgctgccgatgatcacaccatctgctccccagcctgcaatctg 32891031
>gb|BT009154.1| Triticum aestivum clone wl1n.pk0067.f2:fis, full insert mRNA sequence Length = 514 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 251 atcacaccatccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactcca 310 |||||||| ||||| ||||| ||| | ||||| ||||| |||||||||||||| || || Sbjct: 450 atcacaccgtccgctccccagcccacgatctgtttcacatgctctggagtcgatacaccg 391 Query: 311 aaaccaacagc 321 ||||||||||| Sbjct: 390 aaaccaacagc 380
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 |||||||||| ||||||||||||||| |||| ||| || ||| || ||||||||||| Sbjct: 98423 acaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgtg 98364 Query: 476 gttggtgttgt 486 ||||||||||| Sbjct: 98363 gttggtgttgt 98353 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 226 ctgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatctgc 283 ||||||||||||||| ||||| | |||||| ||||| ||||||||||| || |||||| Sbjct: 85907 ctgcctcaccattgcactcccaatgatcactccatctgcaccccaccctgctatctgc 85850 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcacccca 270 ||||||||||||||||||||||| || | |||||| ||||| |||||||| Sbjct: 67294 cccaactgcctcaccattgcgctgccaatgatcactccatctgcacccca 67245 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacag 326 |||||| || |||||||||||||| | ||||| ||||||||||||| Sbjct: 99066 ctgctttacatgctctggagtcgatatgccaaagccaacagcaacag 99020 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 |||| ||||||||||||||| || || | |||||| ||||| ||||||||| Sbjct: 79216 cccagctgcctcaccattgcactgccaatgatcaccccatctgcaccccac 79166 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 413 cttacaagataaacaaatccttctgaagc 441 |||||||| |||||||||||| ||||||| Sbjct: 85485 cttacaaggtaaacaaatcctcctgaagc 85457 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 414 ttacaagataaacaaatccttctgaagcc 442 |||| ||||||||||||||| |||||||| Sbjct: 66883 ttaccagataaacaaatcctcctgaagcc 66855 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 239 gcgctcccgacgatcacaccatccgcaccccaccccgcaatctg 282 ||||| |||| |||||||||||| || ||||| || |||||||| Sbjct: 99187 gcgctgccgatgatcacaccatctgctccccagcctgcaatctg 99144
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 |||||||||| ||||||||||||||| |||| ||| || ||| || ||||||||||| Sbjct: 32982262 acaagataaataaatccttctgaagcttttgcaatctccttcatcctctctgttggtgtg 32982321 Query: 476 gttggtgttgt 486 ||||||||||| Sbjct: 32982322 gttggtgttgt 32982332 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcacccca 270 ||||||||||||||||||||||| || | |||||| ||||| |||||||| Sbjct: 33013391 cccaactgcctcaccattgcgctgccaatgatcactccatctgcacccca 33013440 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 226 ctgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatctgc 283 ||||||||||||||| ||||| | |||||| ||||| ||||||||||| || |||||| Sbjct: 32994778 ctgcctcaccattgcactcccaatgatcactccatctgcaccccaccctgctatctgc 32994835 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 |||| ||||||||||||||| || || | |||||| ||||| ||||||||| Sbjct: 33001469 cccagctgcctcaccattgcactgccaatgatcaccccatctgcaccccac 33001519 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 ctgcttcacctgctctggagtcgacactccaaaaccaacagcaacag 326 |||||| || |||||||||||||| | ||||| ||||||||||||| Sbjct: 32981619 ctgctttacatgctctggagtcgatatgccaaagccaacagcaacag 32981665 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 ttacaagataaacaaatccttctgaagcc 442 |||| ||||||||||||||| |||||||| Sbjct: 33013802 ttaccagataaacaaatcctcctgaagcc 33013830 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 413 cttacaagataaacaaatccttctgaagc 441 |||||||| |||||||||||| ||||||| Sbjct: 32995200 cttacaaggtaaacaaatcctcctgaagc 32995228 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 239 gcgctcccgacgatcacaccatccgcaccccaccccgcaatctg 282 ||||| |||| |||||||||||| || ||||| || |||||||| Sbjct: 32981498 gcgctgccgatgatcacaccatctgctccccagcctgcaatctg 32981541
>gb|AF271384.1|AF271384 Zea mays putative tryptophan synthase alpha (TSAlike) mRNA, complete cds Length = 1447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 251 atcacaccatccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactcca 310 |||||||| ||||| ||||| ||| | ||||| ||||| |||||||||||||| || || Sbjct: 914 atcacaccgtccgctccccagcccacgatctgtttcacatgctctggagtcgatacaccg 855 Query: 311 aaaccaacagc 321 ||||||||||| Sbjct: 854 aaaccaacagc 844
>gb|AY103922.1| Zea mays PCO082497 mRNA sequence Length = 1364 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 251 atcacaccatccgcaccccaccccgcaatctgcttcacctgctctggagtcgacactcca 310 |||||||| ||||| ||||| ||| | ||||| ||||| |||||||||||||| || || Sbjct: 907 atcacaccgtccgctccccagcccacgatctgtttcacatgctctggagtcgatacaccg 848 Query: 311 aaaccaacagc 321 ||||||||||| Sbjct: 847 aaaccaacagc 837
>ref|NM_185063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcacccca 270 ||||||||||||||||||||||| || | |||||| ||||| |||||||| Sbjct: 896 cccaactgcctcaccattgcgctgccaatgatcactccatctgcacccca 847 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 419 agataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgtagtt 478 ||||||||||||||| |||||||| ||| ||| || ||| || |||| ||||||| | Sbjct: 698 agataaacaaatcctcctgaagccgctgtgattgccttcatcctgtctgccggtgtagct 639 Query: 479 ggtgttgttagtaacaccagctcaaggttgttcttg 514 ||||| || || | ||||||||| |||||||||||| Sbjct: 638 ggtgtagtaagcagcaccagctctaggttgttcttg 603
>ref|NM_185066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 226 ctgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatctgc 283 ||||||||||||||| ||||| | |||||| ||||| ||||||||||| || |||||| Sbjct: 900 ctgcctcaccattgcactcccaatgatcactccatctgcaccccaccctgctatctgc 843 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 ||||| |||||||||||| ||||||| | ||| || ||| ||| || ||| |||||| Sbjct: 710 acaaggtaaacaaatcctcctgaagcttctgtgatgatcttcatcctctctcccggtgta 651 Query: 476 gttggtgttgttagtaacaccagctcaaggttgttctt 513 | |||||||||||| | ||||||||| |||||| |||| Sbjct: 650 gctggtgttgttagcagcaccagctctaggttgctctt 613
>gb|AY254103.1| Zea mays clone ASJ-Bx1.1 indole synthase mRNA, complete cds Length = 1044 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 217 ttcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgc 276 |||||||| |||||||||||| ||||| |||| |||||| || || || |||||| ||| Sbjct: 972 ttcgcccagctgcctcaccatggcgctgccgatgatcaccccgtcagcgccccactgcgc 913 Query: 277 aatctgcttcacctgctc 294 ||||||||| || ||||| Sbjct: 912 aatctgctttacgtgctc 895
>dbj|AB124850.1| Triticum aestivum TaBx1-D mRNA for Indole synthase, complete cds Length = 1298 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgcaatc 280 ||||||||||||||||| || || || | |||||| |||||||||||||| | |||||| Sbjct: 924 cccaactgcctcaccatcgcactgccaatgatcaccccatccgcaccccatcttgcaatc 865 Query: 281 tgctt 285 ||||| Sbjct: 864 tgctt 860 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Minus Query: 457 cattctttctgttggtgtagttggtgttgttagtaacaccagctcaaggttgttctt 513 |||||||||| |||| | | ||||||||| || | ||||||||| ||||||||||| Sbjct: 688 cattctttcttctggtatggctggtgttgtgagcagcaccagctcgaggttgttctt 632
>ref|NM_185065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 464 tctgttggtgtagttggtgttgttagtaacaccagctcaaggttgttcttg 514 |||| ||||||||||||||| || || | ||||||||| |||||||||||| Sbjct: 775 tctggtggtgtagttggtgtagtaagcagcaccagctctaggttgttcttg 725 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 |||| ||||||||||||||| || || | |||||| ||||| ||||||||| Sbjct: 1018 cccagctgcctcaccattgcactgccaatgatcaccccatctgcaccccac 968
>dbj|AK072595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E11, full insert sequence Length = 1372 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 464 tctgttggtgtagttggtgttgttagtaacaccagctcaaggttgttcttg 514 |||| ||||||||||||||| || || | ||||||||| |||||||||||| Sbjct: 790 tctggtggtgtagttggtgtagtaagcagcaccagctctaggttgttcttg 740 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 221 cccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccac 271 |||| ||||||||||||||| || || | |||||| ||||| ||||||||| Sbjct: 1033 cccagctgcctcaccattgcactgccaatgatcaccccatctgcaccccac 983
>emb|X76713.1|ZMTRPA Z.mays (C6000237) trpA gene Length = 4796 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 217 ttcgcccaactgcctcaccattgcgctcccgacgatcacaccatccgcaccccaccccgc 276 |||||||| |||||||||||| ||||| |||| |||||| || || || |||||| ||| Sbjct: 3301 ttcgcccagctgcctcaccatggcgctgccgatgatcaccccgtcagcgccccactgcgc 3242 Query: 277 aatctg 282 |||||| Sbjct: 3241 aatctg 3236
>gb|AY316528.1| Brassica oleracea var. capitata putative tryptophan synthase alpha chain mRNA, partial cds Length = 800 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 416 acaagataaacaaatccttctgaagcctttgtaattctctccattctttctgttggtgta 475 ||||| |||| |||||||||||| || | |||||||| |||||| ||||||||||| Sbjct: 410 acaaggtaaataaatccttctgatgcgtcaacaattctcttcattctctctgttggtgtt 351 Query: 476 gttggtgt 483 |||||||| Sbjct: 350 gttggtgt 343 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 200 agaatcgggttgtaatacgtgaa 178
>emb|BX825792.1|CNS0A6HC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 464 tctgttggtgtagttggtgttgttagtaacaccagctcaa 503 ||||||||||| |||||||| ||||||| |||||||||| Sbjct: 640 tctgttggtgtggttggtgtagttagtaggaccagctcaa 601 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 478 agaatcgggttgtaatacgtgaa 456
>ref|NM_115321.2| Arabidopsis thaliana TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN); tryptophan synthase AT3G54640 (TSA1) mRNA, complete cds Length = 1331 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 678 agaatcgggttgtaatacgtgaa 656 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 464 tctgttggtgtagttggtgttgttagtaacaccagctcaa 503 ||||||||||| |||||||| || |||| |||||||||| Sbjct: 840 tctgttggtgtggttggtgtagtgagtaggaccagctcaa 801
>emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, BAC clone T14E10 Length = 94911 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 93135 agaatcgggttgtaatacgtgaa 93157
>emb|AJ841705.1| Isatis tinctoria tsa gene for tryptophan synthase, alpha subunit (TSA1), exons 1-8 Length = 2132 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 971 agaatcgggttgtaatacgtgaa 949
>emb|AJ841704.1| Isatis tinctoria mRNA for tryptophan synthase, alpha subunit (TSA1) (tsa gene) Length = 1128 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 506 agaatcgggttgtaatacgtgaa 484
>emb|BX825994.1|CNS0A6C0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 111 agaatcgggttgtaatacgtgaa 89
>gb|AY087980.1| Arabidopsis thaliana clone 40110 mRNA, complete sequence Length = 1258 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 677 agaatcgggttgtaatacgtgaa 655 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Minus Query: 395 ccagtaactccagtagtgcttacaagataaacaaatccttctgaagcctttgtaattctc 454 ||||| |||||| | | ||| ||||| |||| |||||||||||| || | ||||| | Sbjct: 908 ccagtcactccaattgagctcacaaggtaaataaatccttctgacgcatcaacaattcgc 849 Query: 455 tccattctttctgttggtgtagttggtgttgttagtaacaccagctcaa 503 | ||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 848 ttcattcgctctgttggtgtggttggtgtagtgagtaggaccagctcaa 800
>gb|U18993.1|ATU18993 Arabidopsis thaliana tryptophan synthase alpha chain (TSA1) gene, complete cds Length = 5035 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 627 agaatcgggttgtaatacgtgaa 649 ||||||||||||||||||||||| Sbjct: 2643 agaatcgggttgtaatacgtgaa 2621
>ref|XM_638056.1| Dictyostelium discoideum hypothetical protein (DDB0217819), partial mRNA Length = 6315 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 466 tgttggtgtagttggtgttgtt 487 |||||||||||||||||||||| Sbjct: 45 tgttggtgtagttggtgttgtt 24
>gb|AC114263.2| Dictyostelium discoideum chromosome 2 map 215673-367476 strain AX4, complete sequence Length = 151802 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 466 tgttggtgtagttggtgttgtt 487 |||||||||||||||||||||| Sbjct: 102633 tgttggtgtagttggtgttgtt 102612
>ref|XM_637602.1| Dictyostelium discoideum hypothetical protein (DDB0169078), partial mRNA Length = 3492 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 gttggtgtagttggtgttgtt 487 ||||||||||||||||||||| Sbjct: 2561 gttggtgtagttggtgttgtt 2541
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gttggtgtagttggtgttgtt 487 ||||||||||||||||||||| Sbjct: 42045 gttggtgtagttggtgttgtt 42065
>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence Length = 141442 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ttctctccattctttctgttg 470 ||||||||||||||||||||| Sbjct: 67819 ttctctccattctttctgttg 67839
>emb|BX465183.9| Zebrafish DNA sequence from clone CH211-250A23 in linkage group 21, complete sequence Length = 119419 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 aatgtaatgctacactgtaaa 78 ||||||||||||||||||||| Sbjct: 108879 aatgtaatgctacactgtaaa 108859
>emb|BX470181.7| Zebrafish DNA sequence from clone CH211-91P22 in linkage group 18, complete sequence Length = 186084 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atgtaatgctacactgtaaaa 79 ||||||||||||||||||||| Sbjct: 133587 atgtaatgctacactgtaaaa 133607
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 cttacaagataaacaaatccttctg 437 ||||||||||| ||||||||||||| Sbjct: 48762 cttacaagatacacaaatccttctg 48738
>gb|AF282130.1| Meleagrid herpesvirus 1 unique long region, IRL region, IRS region, unique short region, complete sequences and IRS partial sequence Length = 151102 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 ttcagaatcgggttgtaata 643 |||||||||||||||||||| Sbjct: 21141 ttcagaatcgggttgtaata 21160
>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete sequence Length = 216816 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gcccaactgcctcaccattg 239 |||||||||||||||||||| Sbjct: 196234 gcccaactgcctcaccattg 196215
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 caaaagataaaaatgcatgtttca 147 |||||||||||||| ||||||||| Sbjct: 185661 caaaagataaaaatccatgtttca 185684
>gb|AC125486.4| Mus musculus BAC clone RP23-21G7 from chromosome 10, complete sequence Length = 222316 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gcccaactgcctcaccattg 239 |||||||||||||||||||| Sbjct: 143242 gcccaactgcctcaccattg 143223
>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence Length = 229669 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ttccagcttcttcaaccctt 200 |||||||||||||||||||| Sbjct: 24883 ttccagcttcttcaaccctt 24864
>emb|AL391215.12| Human DNA sequence from clone RP11-408B19 on chromosome 1 Contains part of a novel gene (KIAA1026) and a CpG island, complete sequence Length = 120551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tccaaaaccaacagcaacag 326 |||||||||||||||||||| Sbjct: 53979 tccaaaaccaacagcaacag 53960
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatccgcaccccaccccgc 276 |||||||||||||||||||| Sbjct: 201399 ccatccgcaccccaccccgc 201418
>emb|AL669946.9| Mouse DNA sequence from clone RP23-71G18 on chromosome 11 Contains the 3' end of a novel gene, the Nsg2 gene neuron specific gene family, a novel gene and a CpG island, complete sequence Length = 177182 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 aattctctccattctttctg 467 |||||||||||||||||||| Sbjct: 149103 aattctctccattctttctg 149084
>emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in linkage group 5, complete sequence Length = 226730 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taatgctacactgtaaaaca 81 |||||||||||||||||||| Sbjct: 212375 taatgctacactgtaaaaca 212356
>gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, complete sequence Length = 171340 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gtcgacactccaaaaccaac 318 |||||||||||||||||||| Sbjct: 17630 gtcgacactccaaaaccaac 17649
>emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor cluster Length = 210954 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 attctctccattctttctgt 468 |||||||||||||||||||| Sbjct: 35473 attctctccattctttctgt 35454
>gb|AF291866.1|AF291866 Meleagrid herpesvirus 1 strain FC126, complete genome Length = 159160 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 ttcagaatcgggttgtaata 643 |||||||||||||||||||| Sbjct: 27218 ttcagaatcgggttgtaata 27237
>gb|AC084599.1|CBRG42P09 Caenorhabditis briggsae cosmid G42P09, complete sequence Length = 44251 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 caacatgatccttcgaaatctaaa 51 ||||| |||||||||||||||||| Sbjct: 2140 caacaagatccttcgaaatctaaa 2117
>gb|AC129502.10| Homo sapiens chromosome 11, clone RP11-1110F20, complete sequence Length = 97538 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 caccatccgcaccccacccc 274 |||||||||||||||||||| Sbjct: 61972 caccatccgcaccccacccc 61991
>gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, complete sequence Length = 176900 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aatgcatgtttcatggaaat 154 |||||||||||||||||||| Sbjct: 148745 aatgcatgtttcatggaaat 148764
>dbj|BS000026.1| Pan troglodytes chromosome 22 clone:RP43-035C07, map 22, complete sequences Length = 20681 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 53 ccaggaatg-taatgctacactgtaaaacaga 83 ||||||||| |||||||||||||||| ||||| Sbjct: 2257 ccaggaatgataatgctacactgtaacacaga 2288
>dbj|BS000025.1| Pan troglodytes chromosome 22 clone:PTB-017K18, map 22, complete sequences Length = 144566 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 53 ccaggaatg-taatgctacactgtaaaacaga 83 ||||||||| |||||||||||||||| ||||| Sbjct: 143920 ccaggaatgataatgctacactgtaacacaga 143951
>gb|AC002133.1|AC002133 Human DNA from chromosome 19 cosmid R33502, genomic sequence, complete sequence Length = 41525 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 452 ctctccattctttctgttggtgtagttggtgttgtt 487 ||||||||||||| ||||| ||| |||| ||||||| Sbjct: 16887 ctctccattctttttgttgttgttgttgttgttgtt 16852
>emb|CR759908.11| Zebrafish DNA sequence from clone DKEYP-38F5 in linkage group 20, complete sequence Length = 164351 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gaatgtaatgctacactgtaaaac 80 |||||||| ||||||||||||||| Sbjct: 51592 gaatgtaaagctacactgtaaaac 51615
>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence Length = 189528 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 aatccttctgaagcctttgt 447 |||||||||||||||||||| Sbjct: 86271 aatccttctgaagcctttgt 86252
>emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 in linkage group 20, complete sequence Length = 208051 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tgtaatgctacactgtaaaa 79 |||||||||||||||||||| Sbjct: 124180 tgtaatgctacactgtaaaa 124161
>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete sequence Length = 230105 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tccgtggcctgcttgatttc 351 |||||||||||||||||||| Sbjct: 184788 tccgtggcctgcttgatttc 184807
>emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in linkage group 7, complete sequence Length = 189608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgtaatgctacactgtaaaa 79 |||||||||||||||||||| Sbjct: 132370 tgtaatgctacactgtaaaa 132389
>emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-340L3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188165 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 atccttctgaagcctttgta 448 |||||||||||||||||||| Sbjct: 161441 atccttctgaagcctttgta 161460
>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 53 ccaggaatg-taatgctacactgtaaaacaga 83 ||||||||| |||||||||||||||| ||||| Sbjct: 37690 ccaggaatgataatgctacactgtaacacaga 37721
>emb|CR555302.7| Zebrafish DNA sequence from clone CH211-212C19 in linkage group 10, complete sequence Length = 202469 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 aatgtaatgctacactgtaaaaca 81 |||||| ||||||||||||||||| Sbjct: 160678 aatgtattgctacactgtaaaaca 160655
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 600 gacatgaagttggcgacaccgcgc 623 |||| ||||||||||||||||||| Sbjct: 922021 gacaggaagttggcgacaccgcgc 921998
>gb|AC153968.3| Mus musculus 10 BAC RP24-343C11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151710 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 taattctctccattctttct 466 |||||||||||||||||||| Sbjct: 140184 taattctctccattctttct 140165
>gb|AC110537.19| Mus musculus chromosome 5, clone RP23-44A4, complete sequence Length = 208136 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aatgcatgtttcatggaaat 154 |||||||||||||||||||| Sbjct: 137529 aatgcatgtttcatggaaat 137510 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aatgcatgtttcatggaaat 154 |||||||||||||||||||| Sbjct: 89987 aatgcatgtttcatggaaat 89968 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aatgcatgtttcatggaaat 154 |||||||||||||||||||| Sbjct: 2953 aatgcatgtttcatggaaat 2972
>emb|AL928672.14| Zebrafish DNA sequence from clone CH211-136O4, complete sequence Length = 187939 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 aatgtaatgctacactgtaaaaca 81 |||||| ||||||||||||||||| Sbjct: 65415 aatgtattgctacactgtaaaaca 65392
>gb|AC125532.3| Mus musculus BAC clone RP23-447C2 from 10, complete sequence Length = 182582 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 taattctctccattctttct 466 |||||||||||||||||||| Sbjct: 22067 taattctctccattctttct 22048
>gb|AC160934.2| Mus musculus BAC clone RP23-435H22 from chromosome 15, complete sequence Length = 183147 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ttccagcttcttcaaccctt 200 |||||||||||||||||||| Sbjct: 113963 ttccagcttcttcaaccctt 113982
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcttcacctgctctggagtc 301 |||||||||||||||||||| Sbjct: 41535 gcttcacctgctctggagtc 41554
>gb|M61157.1|DROEAG D.melanogaster putative potassium channel protein (eag) mRNA, complete cds Length = 4061 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atccttcgaaatctaaagccagga 58 ||||||||||||| |||||||||| Sbjct: 157 atccttcgaaatcaaaagccagga 180
>dbj|AP001172.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B812E1, LL56-APP region, complete sequence Length = 149114 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 53 ccaggaatg-taatgctacactgtaaaacaga 83 ||||||||| |||||||||||||||| ||||| Sbjct: 117770 ccaggaatgataatgctacactgtaacacaga 117801 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,376,321 Number of Sequences: 3902068 Number of extensions: 6376321 Number of successful extensions: 154041 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 153663 Number of HSP's gapped (non-prelim): 367 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)