>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds
          Length = 2558

 Score =  410 bits (207), Expect = e-112
 Identities = 230/239 (96%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cagatgaacaattcgcc-ctcaagtttacaatacacactgacaaccgcctcaaaaagcca 59
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 cagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaagcca 2466

                                                                        
Query: 60   ccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaagtgg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 ccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaagtgg 2406

                                                                        
Query: 120  acacgaggtccagattattcaaagtaaaacgccggccntggcaacggtgacatcctcctt 179
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2405 acacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctcctt 2346

                                                                       
Query: 180  gcaattaaaannnnnnnagagctgctatacgagcactgcttactgcgccttggcgagct 238
            ||||||||||       ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 gcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttggcgagct 2287

>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene)
          Length = 2642

 Score =  410 bits (207), Expect = e-112
 Identities = 230/239 (96%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cagatgaacaattcgcc-ctcaagtttacaatacacactgacaaccgcctcaaaaagcca 59
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2570 cagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaagcca 2511

                                                                        
Query: 60   ccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaagtgg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2510 ccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaagtgg 2451

                                                                        
Query: 120  acacgaggtccagattattcaaagtaaaacgccggccntggcaacggtgacatcctcctt 179
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2450 acacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctcctt 2391

                                                                       
Query: 180  gcaattaaaannnnnnnagagctgctatacgagcactgcttactgcgccttggcgagct 238
            ||||||||||       ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2390 gcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttggcgagct 2332

>gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, complete sequence
          Length = 196843

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ccagattattcaaagtaaaac 149
              |||||||||||||||||||||
Sbjct: 160771 ccagattattcaaagtaaaac 160791

>emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on chromosome 10 Contains part
              of the PARD3 gene for par-3 partitioning defective 3
              homolog (C.elegans), complete sequence
          Length = 193131

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ccagattattcaaagtaaaac 149
              |||||||||||||||||||||
Sbjct: 157149 ccagattattcaaagtaaaac 157169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,354,351
Number of Sequences: 3902068
Number of extensions: 1354351
Number of successful extensions: 20182
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20174
Number of HSP's gapped (non-prelim): 4
length of query: 240
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 218
effective length of database: 17,147,199,772
effective search space: 3738089550296
effective search space used: 3738089550296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)