ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags28d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 630 e-178
2gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 617 e-173
3emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 609 e-171
4gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 595 e-167
5emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 529 e-147
6emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 521 e-145
7gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 519 e-144
8emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 498 e-138
9gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 414 e-113
10emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 379 e-102
11gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 319 4e-84
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 174 1e-40
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 100 7e-18
14emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in... 44 0.36
15emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040... 42 1.4
16emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 42 1.4
17gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 42 1.4
18gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete seq... 40 5.6
19gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 geno... 40 5.6
20gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete se... 40 5.6
21emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4... 40 5.6
22emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in ... 40 5.6
23gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete ... 40 5.6
24gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, com... 40 5.6
25gb|AC174465.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 5.6
26gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, c... 40 5.6
27gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small he... 40 5.6
28gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small he... 40 5.6
29gb|AC004108.1|AC004108 Homo sapiens chromosome 17, clone HCIT342... 40 5.6
30dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, ... 40 5.6
31gb|AC005879.3|AC005879 citb_287_c_20, complete sequence 40 5.6
32gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338)... 40 5.6

>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  630 bits (318), Expect = e-178
 Identities = 361/373 (96%), Gaps = 2/373 (0%)
 Strand = Plus / Minus

                                                                       
Query: 47  attcatcgtggcgactcttattggaacgatggaaaaa-cagaaatacataactaagatga 105
           ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 538 attcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataactaagatga 479

                                                                       
Query: 106 tacatttgcttcgatgtagctgatggtatcaagattgttgaagagaaaatgacaaaacga 165
           ||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||
Sbjct: 478 tacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgacaaaacga 420

                                                                       
Query: 166 ccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatgact 225
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 419 ccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaatgact 360

                                                                       
Query: 226 gcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatc 285
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatc 300

                                                                       
Query: 286 tcttggccacggaaaacattgtccatgttgtcacaaacggaagtcatgcatccaattgtg 345
           |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 299 tcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtg 240

                                                                       
Query: 346 cagtactcagtcgcatttggttcaccggattcagggagaagactcagcttaggatagtcc 405
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 239 cagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagtcc 180

                        
Query: 406 ctangacatgttg 418
           ||| |||||||||
Sbjct: 179 ctaggacatgttg 167



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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  617 bits (311), Expect = e-173
 Identities = 384/405 (94%), Gaps = 3/405 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74
           ||||||||||||||| |  ||||| |||||| |||||||||||   ||||||||||||||
Sbjct: 642 aacttttatattaagccaagggtataaatag-attcatcgtgggttctcttattggaacg 584

                                                                       
Query: 75  atggaaaaa-cagaaatacataactaagatgatacatttgcttcgatgtagctgatggta 133
           | ||||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 583 agggaaaaaacagaaatacataactaagatgatacatttgcttcgatctgg-tgatggta 525

                                                                       
Query: 134 tcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 193
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 465

                                                                       
Query: 194 ggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatg 253
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 464 ggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatg 405

                                                                       
Query: 254 cgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgt 313
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 404 cgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgt 345

                                                                       
Query: 314 tgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgg 373
           ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccgg 285

                                                        
Query: 374 attcagggagaagactcagcttaggatagtccctangacatgttg 418
           |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 284 attcagggagaagattcagcttaggatagtccctaggacatgttg 240



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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  609 bits (307), Expect = e-171
 Identities = 383/405 (94%), Gaps = 3/405 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74
           ||||||||||||||| |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 483 aacttttatattaagccaagggcataaatag-attcatcgtggtgactcttattggaacg 425

                                                                       
Query: 75  atggaaaaa-cagaaatacataactaagatgatacatttgcttcgatgtagctgatggta 133
           | ||||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 424 agggaaaaaacagaaatacataactaagatgatacatttgcttcgatctgg-tgatggta 366

                                                                       
Query: 134 tcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 193
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 365 tcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaa 306

                                                                       
Query: 194 ggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatg 253
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 305 ggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatg 246

                                                                       
Query: 254 cgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgt 313
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 245 cgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggt 186

                                                                       
Query: 314 tgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgg 373
           ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccgg 126

                                                        
Query: 374 attcagggagaagactcagcttaggatagtccctangacatgttg 418
           |||||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 125 attcagggagaagattcagcttaggatagtccctaggacaggttg 81



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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  595 bits (300), Expect = e-167
 Identities = 346/359 (96%), Gaps = 2/359 (0%)
 Strand = Plus / Minus

                                                                       
Query: 61  ctcttattggaacgatggaaaaa-cagaaatacataactaagatgatacatttgcttcga 119
           ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 120 tgtagctgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaa 179
           | | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 537 tctgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

                                                                       
Query: 180 atcatgcccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 239
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419

                                                                       
Query: 240 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359

                                                                       
Query: 300 aacattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgc 359
           ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||
Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299

                                                                      
Query: 360 atttggttcaccggattcagggagaagactcagcttaggatagtccctangacatgttg 418
           |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240



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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  529 bits (267), Expect = e-147
 Identities = 360/390 (92%), Gaps = 1/390 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74
           ||||||||||||||| |  |||||||||||| ||||||||||||||| ||||||||||| 
Sbjct: 624 aacttttatattaagccaagggtacaaatag-attcatcgtggcgacccttattggaaca 566

                                                                       
Query: 75  atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134
           | |||||||||||||| ||||| ||||||||||||||| |||||||  ||||||||||||
Sbjct: 565 agggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtat 506

                                                                       
Query: 135 caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194
           ||||||| || |||| |||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 505 caagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaag 446

                                                                       
Query: 195 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 gcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacatgc 386

                                                                       
Query: 255 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 326

                                                                       
Query: 315 gtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgga 374
           |||||| || ||| || |||||||||| |||||||||| |||  ||| ||||||||||||
Sbjct: 325 gtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccgga 266

                                         
Query: 375 ttcagggagaagactcagcttaggatagtc 404
           ||||||||||||| | || |||||||||||
Sbjct: 265 ttcagggagaagattaagtttaggatagtc 236



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>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  521 bits (263), Expect = e-145
 Identities = 359/390 (92%), Gaps = 1/390 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74
           ||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 617 aacttttatattaagccaagggtacaaatag-attcatcgtggcgactcttattggaaca 559

                                                                       
Query: 75  atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134
           | ||||||| | |||||||||| |||||||||||||| ||||| ||  ||||||||||||
Sbjct: 558 agggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtat 499

                                                                       
Query: 135 caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194
           ||||||| || |||| |||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 498 caagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaagaag 439

                                                                       
Query: 195 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 379

                                                                       
Query: 255 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 319

                                                                       
Query: 315 gtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgga 374
           |||||| || ||| || |||||||||| ||||||||||  ||  ||| ||||||||||||
Sbjct: 318 gtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcaccgga 259

                                         
Query: 375 ttcagggagaagactcagcttaggatagtc 404
           ||||||||||||| |||| |||||||||||
Sbjct: 258 ttcagggagaagattcagtttaggatagtc 229



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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  519 bits (262), Expect = e-144
 Identities = 285/293 (97%)
 Strand = Plus / Minus

                                                                       
Query: 126 tgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatg 185
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473

                                                                       
Query: 186 cccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 245
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413

                                                                       
Query: 246 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 305
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353

                                                                       
Query: 306 gtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttgg 365
           ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293

                                                                
Query: 366 ttcaccggattcagggagaagactcagcttaggatagtccctangacatgttg 418
           |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240



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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  498 bits (251), Expect = e-138
 Identities = 353/386 (91%), Gaps = 1/386 (0%)
 Strand = Plus / Minus

                                                                       
Query: 19  tttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacgatgg 78
           ||||||||||| |  |||||||||||| ||||||||||||||| ||||||||||| | ||
Sbjct: 440 tttatattaagccaagggtacaaatag-attcatcgtggcgacccttattggaacaaggg 382

                                                                       
Query: 79  aaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtatcaag 138
           |||||||||||| ||||| ||||||||||||||| |||||||  ||||||||||||||||
Sbjct: 381 aaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322

                                                                       
Query: 139 attgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 198
           ||| || |||| |||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262

                                                                       
Query: 199 gattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttg 258
           ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 202

                                                                       
Query: 259 ctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtca 318
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtca 142

                                                                       
Query: 319 caaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 378
           || || ||| || |||||||||| |||||||||| |||  |||  |||||||||||||||
Sbjct: 141 cagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattca 82

                                     
Query: 379 gggagaagactcagcttaggatagtc 404
           ||||||||| | || |||||||||||
Sbjct: 81  gggagaagattaagtttaggatagtc 56



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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  414 bits (209), Expect = e-113
 Identities = 269/288 (93%), Gaps = 1/288 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74
            ||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||| 
Sbjct: 2317 aacttttatattaagccaagggtacaaatag-attcatcgtggcgactcttgttggaaca 2259

                                                                        
Query: 75   atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134
            | ||||||| | |||||||||| |||||||||||||| ||||| ||  ||||||||||||
Sbjct: 2258 agggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtat 2199

                                                                        
Query: 135  caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194
            ||||||| || |||| |||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 2198 caagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaag 2139

                                                                        
Query: 195  gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 2079

                                                            
Query: 255  gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 302
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 302  cattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcat 361
            ||||||||||||||||||| || ||| || |||||||||| |||||||||| |||  |||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878

                      
Query: 362  ttggttcacc 371
             |||||||||
Sbjct: 1877 ctggttcacc 1868



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 369  accggattcagggagaagactcagcttaggatagtc 404
            ||||||||||||||||||| |||| |||||||||||
Sbjct: 1776 accggattcagggagaagattcagtttaggatagtc 1741



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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  379 bits (191), Expect = e-102
 Identities = 211/218 (96%)
 Strand = Plus / Minus

                                                                       
Query: 201 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 260
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 261 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 320
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                                                       
Query: 321 aacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 380
            ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235

                                                 
Query: 381 gagaagactcagcttaggatagtccctangacatgttg 418
           ||||||| |||||||||||||||||||| |||||||||
Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttg 197



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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  319 bits (161), Expect = 4e-84
 Identities = 173/177 (97%)
 Strand = Plus / Minus

                                                                        
Query: 126  tgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatg 185
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171

                                                                        
Query: 186  cccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 245
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111

                                                                     
Query: 246  ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 302
            |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score =  123 bits (62), Expect = 5e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                        
Query: 302  cattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcat 361
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904

                      
Query: 362  ttggttcacc 371
            ||||||||||
Sbjct: 1903 ttggttcacc 1894



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 369  accggattcagggagaagactcagcttaggatagtccctangacatgttg 418
            ||||||||||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttg 1748



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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  174 bits (88), Expect = 1e-40
 Identities = 190/224 (84%)
 Strand = Plus / Minus

                                                                       
Query: 164 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 223
           ||||| ||||| ||||||||||| |||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 224 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 283
           | ||||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 284 tctcttggccacggaaaacattgtccatgttgtcacaaacggaagtcatgcatccaattg 343
           ||||||||||| | | ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                                                       
Query: 344 tgcagtactcagtcgcatttggttcaccggattcagggagaaga 387
           |||||||||||||  |||  ||||||||||||||| | ||||||
Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaaga 273



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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                       
Query: 310 atgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttca 369
           |||||||||||||||||||||||||||||||| |||||||||||||  |||| || ||||
Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327

                             
Query: 370 ccggattcagggagaaga 387
           ||| |||||| |||||||
Sbjct: 326 ccgtattcagagagaaga 309



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Minus

                                                                       
Query: 153 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 212
           |||| |||||||||| ||||||||||||| | || | |||  ||||||||||||  | ||
Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499

                                                                       
Query: 213 agactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 272
           |||  || |||| ||||| |  |||||||||||| ||||||||||| |||||| |  |||
Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439

                                   
Query: 273 gtcgaatttcatctcttggccacg 296
           |||||  |||||||||||||||||
Sbjct: 438 gtcgatgttcatctcttggccacg 415



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>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3,
             complete sequence
          Length = 102377

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 68    tggaacgatggaaaaacagaaa 89
             ||||||||||||||||||||||
Sbjct: 59947 tggaacgatggaaaaacagaaa 59968



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>emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040G13 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 113473

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    atggaaaaacagaaatacata 95
             |||||||||||||||||||||
Sbjct: 86345 atggaaaaacagaaatacata 86365



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>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5
          Length = 167014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   ggaaaacattgtccatgttgt 316
             |||||||||||||||||||||
Sbjct: 33995 ggaaaacattgtccatgttgt 34015



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>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 304   ttgtccatgttgtcacaaacggaag 328
             ||||||||||||||||||| |||||
Sbjct: 87238 ttgtccatgttgtcacaaatggaag 87262



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>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence
          Length = 58609

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   aaaaacagaaatacataact 98
            ||||||||||||||||||||
Sbjct: 8229 aaaaacagaaatacataact 8210



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>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence
          Length = 43887

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   gttgtcacaaacggaagtca 331
             ||||||||||||||||||||
Sbjct: 41207 gttgtcacaaacggaagtca 41226



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>gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete sequence
          Length = 150457

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aagattgttgaagagaaaat 155
              ||||||||||||||||||||
Sbjct: 107763 aagattgttgaagagaaaat 107782



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>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE
          Length = 114414

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aaatacataactaagatgat 106
             ||||||||||||||||||||
Sbjct: 70952 aaatacataactaagatgat 70971



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>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17,
             complete sequence
          Length = 120315

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   aacagactgaatgactgcac 229
             ||||||||||||||||||||
Sbjct: 61583 aacagactgaatgactgcac 61602



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>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
          Length = 109548

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  aaatacataactaagatgat 106
           ||||||||||||||||||||
Sbjct: 645 aaatacataactaagatgat 664



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>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence
          Length = 193669

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aactaagatgatacatttgc 114
             ||||||||||||||||||||
Sbjct: 96493 aactaagatgatacatttgc 96512



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>gb|AC174465.2| Medicago truncatula chromosome 2 BAC clone mth2-189f20, complete
             sequence
          Length = 90320

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ttgaagagaaaatgacaaaa 162
             ||||||||||||||||||||
Sbjct: 49881 ttgaagagaaaatgacaaaa 49900



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>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence
          Length = 34686

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    acagaaatacataactaaga 102
             ||||||||||||||||||||
Sbjct: 19747 acagaaatacataactaaga 19766



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>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein
            (vis1) gene, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   actcttattggaacgatggaaaaa 83
            |||||||||||||||| |||||||
Sbjct: 1736 actcttattggaacgaaggaaaaa 1713



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>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein
            (vis1) gene, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   actcttattggaacgatggaaaaa 83
            |||||||||||||||| |||||||
Sbjct: 1703 actcttattggaacgaaggaaaaa 1680



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>gb|AC004108.1|AC004108 Homo sapiens chromosome 17, clone HCIT342E3, complete sequence
          Length = 92312

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gaaaaacagaaatacataac 97
             ||||||||||||||||||||
Sbjct: 20724 gaaaaacagaaatacataac 20705



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>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete
             sequences
          Length = 135513

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   ttgtccatgttgtcacaaac 323
             ||||||||||||||||||||
Sbjct: 53181 ttgtccatgttgtcacaaac 53200



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>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence
          Length = 190982

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aactaagatgatacatttgc 114
             ||||||||||||||||||||
Sbjct: 32396 aactaagatgatacatttgc 32377



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>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete
           cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 ccttggccatagaaatcatgccca 189
           |||||||||| |||||||||||||
Sbjct: 862 ccttggccattgaaatcatgccca 839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,448,291
Number of Sequences: 3902068
Number of extensions: 3448291
Number of successful extensions: 64081
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64025
Number of HSP's gapped (non-prelim): 41
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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