| Clone Name | rbags28d03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 630 bits (318), Expect = e-178 Identities = 361/373 (96%), Gaps = 2/373 (0%) Strand = Plus / Minus Query: 47 attcatcgtggcgactcttattggaacgatggaaaaa-cagaaatacataactaagatga 105 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 538 attcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataactaagatga 479 Query: 106 tacatttgcttcgatgtagctgatggtatcaagattgttgaagagaaaatgacaaaacga 165 ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| Sbjct: 478 tacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgacaaaacga 420 Query: 166 ccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatgact 225 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 419 ccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaatgact 360 Query: 226 gcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatc 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatc 300 Query: 286 tcttggccacggaaaacattgtccatgttgtcacaaacggaagtcatgcatccaattgtg 345 |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 299 tcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtg 240 Query: 346 cagtactcagtcgcatttggttcaccggattcagggagaagactcagcttaggatagtcc 405 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 239 cagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagtcc 180 Query: 406 ctangacatgttg 418 ||| ||||||||| Sbjct: 179 ctaggacatgttg 167
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 617 bits (311), Expect = e-173 Identities = 384/405 (94%), Gaps = 3/405 (0%) Strand = Plus / Minus Query: 15 aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74 ||||||||||||||| | ||||| |||||| ||||||||||| |||||||||||||| Sbjct: 642 aacttttatattaagccaagggtataaatag-attcatcgtgggttctcttattggaacg 584 Query: 75 atggaaaaa-cagaaatacataactaagatgatacatttgcttcgatgtagctgatggta 133 | ||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct: 583 agggaaaaaacagaaatacataactaagatgatacatttgcttcgatctgg-tgatggta 525 Query: 134 tcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 193 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 465 Query: 194 ggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatg 253 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 ggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatg 405 Query: 254 cgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgt 313 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 404 cgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgt 345 Query: 314 tgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgg 373 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccgg 285 Query: 374 attcagggagaagactcagcttaggatagtccctangacatgttg 418 |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 284 attcagggagaagattcagcttaggatagtccctaggacatgttg 240
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 609 bits (307), Expect = e-171 Identities = 383/405 (94%), Gaps = 3/405 (0%) Strand = Plus / Minus Query: 15 aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74 ||||||||||||||| | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 483 aacttttatattaagccaagggcataaatag-attcatcgtggtgactcttattggaacg 425 Query: 75 atggaaaaa-cagaaatacataactaagatgatacatttgcttcgatgtagctgatggta 133 | ||||||| ||||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct: 424 agggaaaaaacagaaatacataactaagatgatacatttgcttcgatctgg-tgatggta 366 Query: 134 tcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaa 193 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 365 tcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaa 306 Query: 194 ggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatg 253 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 305 ggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatg 246 Query: 254 cgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgt 313 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 245 cgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggt 186 Query: 314 tgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgg 373 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccgg 126 Query: 374 attcagggagaagactcagcttaggatagtccctangacatgttg 418 |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 125 attcagggagaagattcagcttaggatagtccctaggacaggttg 81
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 595 bits (300), Expect = e-167 Identities = 346/359 (96%), Gaps = 2/359 (0%) Strand = Plus / Minus Query: 61 ctcttattggaacgatggaaaaa-cagaaatacataactaagatgatacatttgcttcga 119 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 120 tgtagctgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaa 179 | | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 537 tctgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 180 atcatgcccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 240 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 300 aacattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgc 359 ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 360 atttggttcaccggattcagggagaagactcagcttaggatagtccctangacatgttg 418 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 529 bits (267), Expect = e-147 Identities = 360/390 (92%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 15 aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74 ||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| Sbjct: 624 aacttttatattaagccaagggtacaaatag-attcatcgtggcgacccttattggaaca 566 Query: 75 atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134 | |||||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||| Sbjct: 565 agggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtat 506 Query: 135 caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194 ||||||| || |||| |||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 505 caagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaag 446 Query: 195 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 445 gcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacatgc 386 Query: 255 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 326 Query: 315 gtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgga 374 |||||| || ||| || |||||||||| |||||||||| ||| ||| |||||||||||| Sbjct: 325 gtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccgga 266 Query: 375 ttcagggagaagactcagcttaggatagtc 404 ||||||||||||| | || ||||||||||| Sbjct: 265 ttcagggagaagattaagtttaggatagtc 236
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 521 bits (263), Expect = e-145 Identities = 359/390 (92%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 15 aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74 ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 617 aacttttatattaagccaagggtacaaatag-attcatcgtggcgactcttattggaaca 559 Query: 75 atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134 | ||||||| | |||||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 558 agggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtat 499 Query: 135 caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194 ||||||| || |||| |||||||||| |||||| |||||||||||||||||| ||||||| Sbjct: 498 caagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaagaag 439 Query: 195 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 379 Query: 255 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 319 Query: 315 gtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccgga 374 |||||| || ||| || |||||||||| |||||||||| || ||| |||||||||||| Sbjct: 318 gtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcaccgga 259 Query: 375 ttcagggagaagactcagcttaggatagtc 404 ||||||||||||| |||| ||||||||||| Sbjct: 258 ttcagggagaagattcagtttaggatagtc 229
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 519 bits (262), Expect = e-144 Identities = 285/293 (97%) Strand = Plus / Minus Query: 126 tgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatg 185 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 186 cccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 245 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 246 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 306 gtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttgg 365 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 366 ttcaccggattcagggagaagactcagcttaggatagtccctangacatgttg 418 |||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 498 bits (251), Expect = e-138 Identities = 353/386 (91%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 19 tttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacgatgg 78 ||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| | || Sbjct: 440 tttatattaagccaagggtacaaatag-attcatcgtggcgacccttattggaacaaggg 382 Query: 79 aaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtatcaag 138 |||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 381 aaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322 Query: 139 attgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 198 ||| || |||| |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262 Query: 199 gattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttg 258 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 202 Query: 259 ctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtca 318 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 201 ctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtca 142 Query: 319 caaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 378 || || ||| || |||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 141 cagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattca 82 Query: 379 gggagaagactcagcttaggatagtc 404 ||||||||| | || ||||||||||| Sbjct: 81 gggagaagattaagtttaggatagtc 56
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 414 bits (209), Expect = e-113 Identities = 269/288 (93%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 15 aacttttatattaagncccgggtacaaatagtattcatcgtggcgactcttattggaacg 74 ||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||||| Sbjct: 2317 aacttttatattaagccaagggtacaaatag-attcatcgtggcgactcttgttggaaca 2259 Query: 75 atggaaaaacagaaatacataactaagatgatacatttgcttcgatgtagctgatggtat 134 | ||||||| | |||||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 2258 agggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtat 2199 Query: 135 caagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaag 194 ||||||| || |||| |||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 2198 caagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaag 2139 Query: 195 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2138 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 2079 Query: 255 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 302 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2078 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 302 cattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcat 361 ||||||||||||||||||| || ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 362 ttggttcacc 371 ||||||||| Sbjct: 1877 ctggttcacc 1868 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 369 accggattcagggagaagactcagcttaggatagtc 404 ||||||||||||||||||| |||| ||||||||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtc 1741
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 379 bits (191), Expect = e-102 Identities = 211/218 (96%) Strand = Plus / Minus Query: 201 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 260 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 261 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 320 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 321 aacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 380 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 381 gagaagactcagcttaggatagtccctangacatgttg 418 ||||||| |||||||||||||||||||| ||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttg 197
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 319 bits (161), Expect = 4e-84 Identities = 173/177 (97%) Strand = Plus / Minus Query: 126 tgatggtatcaagattgttgaagagaaaatgacaaaacgaccttggccatagaaatcatg 185 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 186 cccaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 245 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 246 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 302 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 123 bits (62), Expect = 5e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 302 cattgtccatgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcat 361 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 362 ttggttcacc 371 |||||||||| Sbjct: 1903 ttggttcacc 1894 Score = 77.8 bits (39), Expect = 3e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 369 accggattcagggagaagactcagcttaggatagtccctangacatgttg 418 ||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttg 1748
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 174 bits (88), Expect = 1e-40 Identities = 190/224 (84%) Strand = Plus / Minus Query: 164 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 223 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 224 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 283 | ||||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 284 tctcttggccacggaaaacattgtccatgttgtcacaaacggaagtcatgcatccaattg 343 ||||||||||| | | ||||||||||||||||||||||||||||||||||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 344 tgcagtactcagtcgcatttggttcaccggattcagggagaaga 387 ||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaaga 273
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 310 atgttgtcacaaacggaagtcatgcatccaattgtgcagtactcagtcgcatttggttca 369 |||||||||||||||||||||||||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 370 ccggattcagggagaaga 387 ||| |||||| ||||||| Sbjct: 326 ccgtattcagagagaaga 309 Score = 87.7 bits (44), Expect = 3e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 153 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 212 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 213 agactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 272 ||| || |||| ||||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 273 gtcgaatttcatctcttggccacg 296 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3, complete sequence Length = 102377 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 tggaacgatggaaaaacagaaa 89 |||||||||||||||||||||| Sbjct: 59947 tggaacgatggaaaaacagaaa 59968
>emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040G13 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 113473 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 atggaaaaacagaaatacata 95 ||||||||||||||||||||| Sbjct: 86345 atggaaaaacagaaatacata 86365
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ggaaaacattgtccatgttgt 316 ||||||||||||||||||||| Sbjct: 33995 ggaaaacattgtccatgttgt 34015
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 ttgtccatgttgtcacaaacggaag 328 ||||||||||||||||||| ||||| Sbjct: 87238 ttgtccatgttgtcacaaatggaag 87262
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence Length = 58609 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaaaacagaaatacataact 98 |||||||||||||||||||| Sbjct: 8229 aaaaacagaaatacataact 8210
>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence Length = 43887 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gttgtcacaaacggaagtca 331 |||||||||||||||||||| Sbjct: 41207 gttgtcacaaacggaagtca 41226
>gb|AC147889.2| Xenopus tropicalis clone CH216-168F2, complete sequence Length = 150457 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 aagattgttgaagagaaaat 155 |||||||||||||||||||| Sbjct: 107763 aagattgttgaagagaaaat 107782
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaatacataactaagatgat 106 |||||||||||||||||||| Sbjct: 70952 aaatacataactaagatgat 70971
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aacagactgaatgactgcac 229 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaatacataactaagatgat 106 |||||||||||||||||||| Sbjct: 645 aaatacataactaagatgat 664
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aactaagatgatacatttgc 114 |||||||||||||||||||| Sbjct: 96493 aactaagatgatacatttgc 96512
>gb|AC174465.2| Medicago truncatula chromosome 2 BAC clone mth2-189f20, complete sequence Length = 90320 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ttgaagagaaaatgacaaaa 162 |||||||||||||||||||| Sbjct: 49881 ttgaagagaaaatgacaaaa 49900
>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence Length = 34686 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 acagaaatacataactaaga 102 |||||||||||||||||||| Sbjct: 19747 acagaaatacataactaaga 19766
>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein (vis1) gene, complete cds Length = 2257 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 actcttattggaacgatggaaaaa 83 |||||||||||||||| ||||||| Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein (vis1) gene, complete cds Length = 2224 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 actcttattggaacgatggaaaaa 83 |||||||||||||||| ||||||| Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
>gb|AC004108.1|AC004108 Homo sapiens chromosome 17, clone HCIT342E3, complete sequence Length = 92312 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gaaaaacagaaatacataac 97 |||||||||||||||||||| Sbjct: 20724 gaaaaacagaaatacataac 20705
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ttgtccatgttgtcacaaac 323 |||||||||||||||||||| Sbjct: 53181 ttgtccatgttgtcacaaac 53200
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aactaagatgatacatttgc 114 |||||||||||||||||||| Sbjct: 32396 aactaagatgatacatttgc 32377
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ccttggccatagaaatcatgccca 189 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,448,291 Number of Sequences: 3902068 Number of extensions: 3448291 Number of successful extensions: 64081 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64025 Number of HSP's gapped (non-prelim): 41 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)