Clone Information

BLAST Search Result

Clone Name	rbags27n24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AY074784.1\| Triticum aestivum dehydroascorbate reductase (DHA...	595	e-167
2	emb\|AJ622892.1\| Triticum durum partial mRNA for DRP5 protein (dr...	420	e-114
3	gb\|DQ090998.1\| Puccinellia tenuiflora dehydroascorbate reductase...	238	2e-59
4	gb\|DQ093638.1\| Eustoma grandiflorum dehydroascorbate reductase p...	236	8e-59
5	gb\|AY106435.1\| Zea mays PCO106999 mRNA sequence	194	3e-46
6	gb\|AY074786.1\| Oryza sativa dehydroascorbate reductase (DHAR) mR...	139	1e-29
7	dbj\|AK070895.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	139	1e-29
8	dbj\|AK061836.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	139	1e-29
9	dbj\|AB037970.1\| Oryza sativa (japonica cultivar-group) DHAR1 mRN...	139	1e-29
10	gb\|DQ430382.1\| Sorghum propinquum locus pSB1945 genomic sequence	82	3e-12
11	gb\|DQ430381.1\| Sorghum bicolor voucher PI585454 locus pSB1945 ge...	82	3e-12
12	gb\|DQ430380.1\| Sorghum bicolor voucher PI267539 locus pSB1945 ge...	82	3e-12
13	gb\|DQ430378.1\| Sorghum bicolor voucher PI221607 locus pSB1945 ge...	82	3e-12
14	gb\|DQ430377.1\| Sorghum bicolor voucher PI152702 locus pSB1945 ge...	82	3e-12
15	gb\|DQ430376.1\| Sorghum bicolor voucher NSL92371 locus pSB1945 ge...	82	3e-12
16	gb\|DQ430375.1\| Sorghum bicolor voucher NSL87902 locus pSB1945 ge...	82	3e-12
17	gb\|DQ430374.1\| Sorghum bicolor voucher NSL87666 locus pSB1945 ge...	82	3e-12
18	gb\|DQ430373.1\| Sorghum bicolor voucher NSL77217 locus pSB1945 ge...	82	3e-12
19	gb\|DQ430372.1\| Sorghum bicolor voucher NSL77034 locus pSB1945 ge...	82	3e-12
20	gb\|DQ430371.1\| Sorghum bicolor voucher NSL56174 locus pSB1945 ge...	82	3e-12
21	gb\|DQ430370.1\| Sorghum bicolor voucher NSL56003 locus pSB1945 ge...	82	3e-12
22	gb\|DQ430369.1\| Sorghum bicolor voucher NSL55243 locus pSB1945 ge...	82	3e-12
23	gb\|DQ430368.1\| Sorghum bicolor voucher NSL51365 locus pSB1945 ge...	82	3e-12
24	gb\|DQ430367.1\| Sorghum bicolor voucher NSL51030 locus pSB1945 ge...	82	3e-12
25	gb\|DQ430366.1\| Sorghum bicolor voucher NSL50875 locus pSB1945 ge...	82	3e-12
26	gb\|DQ430365.1\| Sorghum bicolor voucher BTx623 locus pSB1945 geno...	82	3e-12
27	gb\|DQ430379.1\| Sorghum bicolor voucher PI267408 locus pSB1945 ge...	74	7e-10
28	gb\|AC078977.6\| Oryza sativa (japonica cultivar-group) chromosome...	66	2e-07
29	gb\|AC108504.2\| Oryza sativa (japonica cultivar-group) chromosome...	66	2e-07
30	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	66	2e-07
31	gb\|AE017283.1\| Propionibacterium acnes KPA171202, complete genome	44	0.59
32	gb\|CP000099.1\| Methanosarcina barkeri str. fusaro chromosome 1, ...	42	2.3
33	gb\|AC109221.32\| Mus musculus chromosome 7, clone RP23-207N2, com...	42	2.3
34	dbj\|AP006840.1\| Symbiobacterium thermophilum IAM 14863 DNA, comp...	42	2.3
35	gb\|CP000031.1\| Silicibacter pomeroyi DSS-3, complete genome	40	9.3
36	gb\|AC168056.3\| Mus musculus BAC clone RP24-189B1 from chromosome...	40	9.3
37	ref\|XM_366481.1\| Magnaporthe grisea 70-15 chromosome VII predict...	40	9.3
38	ref\|XM_714685.1\| Candida albicans SC5314 hypothetical protein (C...	40	9.3
39	ref\|XM_714802.1\| Candida albicans SC5314 hypothetical protein (C...	40	9.3
40	gb\|AC144402.2\| Atelerix albiventris clone LBNL4-89B6, complete s...	40	9.3
41	gb\|CP000270.1\| Burkholderia xenovorans LB400 chromosome 1, compl...	40	9.3
42	gb\|AC063918.21\| Homo sapiens 3 BAC RP11-49C18 (Roswell Park Canc...	40	9.3
43	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	9.3
44	emb\|BX088727.14\| Zebrafish DNA sequence from clone DKEY-218A22 i...	40	9.3
45	emb\|Z84494.1\|HSLUCA7 Human DNA sequence from clone XXcos-7 on ch...	40	9.3
46	emb\|AL928663.4\| Mouse DNA sequence from clone RP23-315A20 on chr...	40	9.3

>gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete
           cds
          Length = 956

 Score =  595 bits (300), Expect = e-167
 Identities = 378/404 (93%)
 Strand = Plus / Minus

                                                                       
Query: 273 ggcgggggagcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtc 332
           |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggcgggagggcttacgggttcactttcggcgcccacccggcgatcaggttctccttggtc 665

                                                                       
Query: 333 ggcttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 392
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gccttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 605

                                                                       
Query: 393 gtcagtgtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaag 452
           ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||
Sbjct: 604 gtcagggtttcagggaccttccagcccttgaagtgctccagggcgacctggagatggtag 545

                                                                       
Query: 453 agcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcca 512
           ||||||||||||| |||||||||  | |||||||  |||||||| ||||| |||||||||
Sbjct: 544 agcttcggagccaggctgagatcgacagcggagatgttcgccccattgatgtagggtcca 485

                                                                       
Query: 513 tgggcctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagcca 572
           |||||||| ||||||||||| || ||||||||||| |||||||||||||||||||| |||
Sbjct: 484 tgggccttcaggtgctcttcgagcgcctgcagctcatcaacaagtgccttctccgaacca 425

                                                                       
Query: 573 tcgctggcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccact 632
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 424 tcgctggcatccttgctcttcaagaacgtgacaaaggtggagaagatctttgatcccact 365

                                                       
Query: 633 gatgcatactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 364 gatgcatattcagcaggggtcacaagtgatggagttgggtactt 321



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 163 aggctcgctcgcattattccaa 184
           ||||||||||||||||||||||
Sbjct: 806 aggctcgctcgcattattccaa 785

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>emb|AJ622892.1| Triticum durum partial mRNA for DRP5 protein (drg5 gene)
          Length = 478

 Score =  420 bits (212), Expect = e-114
 Identities = 266/284 (93%)
 Strand = Plus / Plus

                                                                       
Query: 393 gtcagtgtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaag 452
           ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||
Sbjct: 1   gtcagggtttcagggaccttccagcccttgaagtgctccagggcgacctggaggtggtag 60

                                                                       
Query: 453 agcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcca 512
           ||||||||||||| |||||||||  |||||||||  |||||||||||||| |||||||||
Sbjct: 61  agcttcggagccaggctgagatcgacggcggagatgttcgccccgttgatgtagggtcca 120

                                                                       
Query: 513 tgggcctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagcca 572
           |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 121 tgggccttcaggtgctcttcgagtgcctgcagctcgtcaacaagtgccttttccgaacca 180

                                                                       
Query: 573 tcgctggcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccact 632
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 tcgctggcatccttgctcttcaagaacgtgacaaaggtggagaagatctttgatcccact 240

                                                       
Query: 633 gatgcatactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 241 gatgcatattcagcaggggtcacaagtgatggagttgggtactt 284

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>gb|DQ090998.1| Puccinellia tenuiflora dehydroascorbate reductase protein mRNA,
           partial cds
          Length = 202

 Score =  238 bits (120), Expect = 2e-59
 Identities = 162/176 (92%)
 Strand = Plus / Minus

                                                                       
Query: 282 gcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtc 341
           |||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 200 gcttacgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtc 141

                                                                       
Query: 342 ttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtt 401
           |||||||| || || |||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 140 ttgacgaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtt 81

                                                                   
Query: 402 tcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 457
           || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 80  tcggggaccttccatcctttgaaatgctccagggcaacctggagatggaagagctt 25

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>gb|DQ093638.1| Eustoma grandiflorum dehydroascorbate reductase protein mRNA,
           partial cds
          Length = 195

 Score =  236 bits (119), Expect = 8e-59
 Identities = 158/171 (92%)
 Strand = Plus / Minus

                                                                       
Query: 287 cgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgac 346
           ||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 195 cgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtcttgac 136

                                                                       
Query: 347 gaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagg 406
           ||| || || |||||||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 135 gaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtttcagg 76

                                                              
Query: 407 gaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 457
           ||||||||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 75  gaccttccatcctttgaaatgctccagggcaacctggagatggaagagctt 25

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>gb|AY106435.1| Zea mays PCO106999 mRNA sequence
          Length = 1141

 Score =  194 bits (98), Expect = 3e-46
 Identities = 314/386 (81%)
 Strand = Plus / Minus

                                                                       
Query: 291 ttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgacgaac 350
           |||||||| |||||||| || || |||| || ||||| ||  ||||| |||||||| || 
Sbjct: 728 ttcaccttgggcgcccatcccgcaatcacgtgctcctcggatggcttagtcttgacaaaa 669

                                                                       
Query: 351 gactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagggacc 410
           || || |||||||| ||||||| ||||||||| |||||| |||| ||  |||| |||| |
Sbjct: 668 gattcacggctgaaaagagccttggtgtaggcgtggacgttggttaggttttctgggatc 609

                                                                       
Query: 411 ttccagcctttgaagtgctccagggcaacctggaggtggaagagcttcggagccaagctg 470
           |||||||||||||| |||||||| || | ||| |||||||| ||||| ||  ||| ||| 
Sbjct: 608 ttccagcctttgaaatgctccagtgcgatctgtaggtggaaaagctttggccccaggcta 549

                                                                       
Query: 471 agatccgcggcggagacattcgccccgttgatatagggtccatgggcctttaggtgctct 530
           ||||| || || || || ||| |||| || || ||||| ||||| || || || || || 
Sbjct: 548 agatcagctgctgacacgttctccccatttatgtaggggccatgagctttgagatgatca 489

                                                                       
Query: 531 tccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtccttgctc 590
           ||||||||||||||||| || | ||| |||||||| || ||||| || || |||||||||
Sbjct: 488 tccagtgcctgcagctcatccagaagcgccttctctgacccatcactagcatccttgctc 429

                                                                       
Query: 591 ttcaagaaggtgacaaaggtggagaagatctttgatcccactgatgcatactcaggaggg 650
           ||||||||  |||||||||  | ||| ||||||||||||||||||||||| || ||||||
Sbjct: 428 ttcaagaacttgacaaaggctgggaaaatctttgatcccactgatgcatattctggaggg 369

                                     
Query: 651 gtcacaagtgatggagttgggtactt 676
           || || || || ||||||||| ||||
Sbjct: 368 gtgaccagagaaggagttgggaactt 343

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>gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mRNA, complete cds
          Length = 1067

 Score =  139 bits (70), Expect = 1e-29
 Identities = 271/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 339 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 398
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 666 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 607

                                                                       
Query: 399 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 458
             ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| 
Sbjct: 606 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 547

                                                                       
Query: 459 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 518
           || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| || 
Sbjct: 546 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 487

                                                                       
Query: 519 tttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 578
           || || ||||| || ||||||||||| ||   || |||||||||||| || |||||  | 
Sbjct: 486 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 427

                                                                       
Query: 579 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccactgatgca 638
           |  ||||||||||||||||| ||    |||   ||||| || ||||||||||||||||||
Sbjct: 426 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 367

                                                 
Query: 639 tactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||||||||| ||||| || || |||||||||||
Sbjct: 366 tactcaggaggggtgacaagagacggggttgggtactt 329

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>dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074C02, full
           insert sequence
          Length = 1198

 Score =  139 bits (70), Expect = 1e-29
 Identities = 271/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 339 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 398
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 667 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 608

                                                                       
Query: 399 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 458
             ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| 
Sbjct: 607 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 548

                                                                       
Query: 459 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 518
           || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| || 
Sbjct: 547 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 488

                                                                       
Query: 519 tttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 578
           || || ||||| || ||||||||||| ||   || |||||||||||| || |||||  | 
Sbjct: 487 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 428

                                                                       
Query: 579 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccactgatgca 638
           |  ||||||||||||||||| ||    |||   ||||| || ||||||||||||||||||
Sbjct: 427 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 368

                                                 
Query: 639 tactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||||||||| ||||| || || |||||||||||
Sbjct: 367 tactcaggaggggtgacaagagacggggttgggtactt 330

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>dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D08, full
           insert sequence
          Length = 1053

 Score =  139 bits (70), Expect = 1e-29
 Identities = 271/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 339 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 398
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 671 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 612

                                                                       
Query: 399 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 458
             ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| 
Sbjct: 611 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 552

                                                                       
Query: 459 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 518
           || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| || 
Sbjct: 551 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 492

                                                                       
Query: 519 tttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 578
           || || ||||| || ||||||||||| ||   || |||||||||||| || |||||  | 
Sbjct: 491 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 432

                                                                       
Query: 579 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccactgatgca 638
           |  ||||||||||||||||| ||    |||   ||||| || ||||||||||||||||||
Sbjct: 431 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 372

                                                 
Query: 639 tactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||||||||| ||||| || || |||||||||||
Sbjct: 371 tactcaggaggggtgacaagagacggggttgggtactt 334

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>dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRNA for GSH-dependent
           dehydroascorbate reductase 1, complete cds
          Length = 1044

 Score =  139 bits (70), Expect = 1e-29
 Identities = 271/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 339 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 398
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 636 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 577

                                                                       
Query: 399 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 458
             ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| 
Sbjct: 576 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 517

                                                                       
Query: 459 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 518
           || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| || 
Sbjct: 516 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 457

                                                                       
Query: 519 tttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 578
           || || ||||| || ||||||||||| ||   || |||||||||||| || |||||  | 
Sbjct: 456 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 397

                                                                       
Query: 579 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatctttgatcccactgatgca 638
           |  ||||||||||||||||| ||    |||   ||||| || ||||||||||||||||||
Sbjct: 396 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 337

                                                 
Query: 639 tactcaggaggggtcacaagtgatggagttgggtactt 676
           |||||||||||||| ||||| || || |||||||||||
Sbjct: 336 tactcaggaggggtgacaagagacggggttgggtactt 299

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>gb|DQ430382.1| Sorghum propinquum locus pSB1945 genomic sequence
          Length = 610

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 597 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 538

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 537 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 493

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>gb|DQ430381.1| Sorghum bicolor voucher PI585454 locus pSB1945 genomic sequence
          Length = 618

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 546

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 545 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 501

to top

>gb|DQ430380.1| Sorghum bicolor voucher PI267539 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430378.1| Sorghum bicolor voucher PI221607 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430377.1| Sorghum bicolor voucher PI152702 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430376.1| Sorghum bicolor voucher NSL92371 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430375.1| Sorghum bicolor voucher NSL87902 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430374.1| Sorghum bicolor voucher NSL87666 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430373.1| Sorghum bicolor voucher NSL77217 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430372.1| Sorghum bicolor voucher NSL77034 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430371.1| Sorghum bicolor voucher NSL56174 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430370.1| Sorghum bicolor voucher NSL56003 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430369.1| Sorghum bicolor voucher NSL55243 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430368.1| Sorghum bicolor voucher NSL51365 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430367.1| Sorghum bicolor voucher NSL51030 locus pSB1945 genomic sequence
          Length = 618

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 546

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 545 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 501

to top

>gb|DQ430366.1| Sorghum bicolor voucher NSL50875 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430365.1| Sorghum bicolor voucher BTx623 locus pSB1945 genomic sequence
          Length = 798

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           ||||||||||||||  |||||||||  | ||| ||||||||||||
Sbjct: 725 ttgctcttcaagaacttgacaaaggctgggaaaatctttgatccc 681

to top

>gb|DQ430379.1| Sorghum bicolor voucher PI267408 locus pSB1945 genomic sequence
          Length = 609

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                       
Query: 525 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 584
           ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || |||
Sbjct: 596 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 537

                                                        
Query: 585 ttgctcttcaagaaggtgacaaaggtggagaagatctttgatccc 629
           |||||||||| |||  |||||||||  | ||| ||||||||||||
Sbjct: 536 ttgctcttcaggaacttgacaaaggctgggaaaatctttgatccc 492

to top

>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 405   gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 457
             |||| ||||||||||||||| |||||||| ||||||||||| ||| |||||||
Sbjct: 50721 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 50773



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 629   cactgatgcatactcaggaggggtcacaagtgatggagttgggtactt 676
             |||||||||||||||||||||||| ||||| || || |||||||||||
Sbjct: 51804 cactgatgcatactcaggaggggtgacaagagacggggttgggtactt 51851

to top

>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
              complete sequence
          Length = 140282

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                   
Query: 405    gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 457
              |||| ||||||||||||||| |||||||| ||||||||||| ||| |||||||
Sbjct: 118740 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 118792



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 629    cactgatgcatactcaggaggggtcacaagtgatggagttgggtactt 676
              |||||||||||||||||||||||| ||||| || || |||||||||||
Sbjct: 119823 cactgatgcatactcaggaggggtgacaagagacggggttgggtactt 119870

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                   
Query: 405    gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 457
              |||| ||||||||||||||| |||||||| ||||||||||| ||| |||||||
Sbjct: 846298 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 846350



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 629    cactgatgcatactcaggaggggtcacaagtgatggagttgggtactt 676
              |||||||||||||||||||||||| ||||| || || |||||||||||
Sbjct: 847381 cactgatgcatactcaggaggggtgacaagagacggggttgggtactt 847428

to top

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 329     ggtcggcttggtcttgacgaacgact 354
               ||||||| ||||||||||||||||||
Sbjct: 1119794 ggtcggcctggtcttgacgaacgact 1119769

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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 512     atgggcctttaggtgctcttccagt 536
               |||||||||||||||||||| ||||
Sbjct: 3943514 atgggcctttaggtgctcttgcagt 3943538

to top

>gb|AC109221.32| Mus musculus chromosome 7, clone RP23-207N2, complete sequence
          Length = 195657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    agccaggcagggggcagacag 117
             |||||||||||||||||||||
Sbjct: 71257 agccaggcagggggcagacag 71277

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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    acgggttcaccttcggcgccc 306
              |||||||||||||||||||||
Sbjct: 209716 acgggttcaccttcggcgccc 209736

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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    ccttggtcggcttggtcttg 344
              ||||||||||||||||||||
Sbjct: 505341 ccttggtcggcttggtcttg 505322

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>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence
          Length = 179458

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   cctggaggtggaagagcttc 458
             ||||||||||||||||||||
Sbjct: 51516 cctggaggtggaagagcttc 51497

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>ref|XM_366481.1| Magnaporthe grisea 70-15 chromosome VII predicted protein
           (MG02557.4) partial mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 cggcttggtcttgacgaacg 351
           ||||||||||||||||||||
Sbjct: 216 cggcttggtcttgacgaacg 197

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>ref|XM_714685.1| Candida albicans SC5314 hypothetical protein (CaO19_14092), mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 224  tactactgccatcactactggcac 247
            ||||||||||| ||||||||||||
Sbjct: 1363 tactactgccagcactactggcac 1340

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>ref|XM_714802.1| Candida albicans SC5314 hypothetical protein (CaO19_6800), mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 224  tactactgccatcactactggcac 247
            ||||||||||| ||||||||||||
Sbjct: 1363 tactactgccagcactactggcac 1340

to top

>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence
          Length = 161430

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    caggcagagcacacagcaga 163
              ||||||||||||||||||||
Sbjct: 111810 caggcagagcacacagcaga 111829

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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     cggcgatcaggttctccttg 329
               ||||||||||||||||||||
Sbjct: 3304928 cggcgatcaggttctccttg 3304947

to top

>gb|AC063918.21| Homo sapiens 3 BAC RP11-49C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97001

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   tttcagggaccttccagcct 419
             ||||||||||||||||||||
Sbjct: 18007 tttcagggaccttccagcct 17988

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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     gatcaggttctccttggtcg 333
               ||||||||||||||||||||
Sbjct: 3814314 gatcaggttctccttggtcg 3814295

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>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2,
             complete sequence
          Length = 185178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ctcgcattattccaaaccca 189
             ||||||||||||||||||||
Sbjct: 28852 ctcgcattattccaaaccca 28833

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>emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on chromosome 3, complete
             sequence
          Length = 16950

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agccaggcagggggcagaca 116
             ||||||||||||||||||||
Sbjct: 12882 agccaggcagggggcagaca 12863

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>emb|AL928663.4| Mouse DNA sequence from clone RP23-315A20 on chromosome 2, complete
             sequence
          Length = 94702

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   gaagtgctccagggcaacct 441
             ||||||||||||||||||||
Sbjct: 10457 gaagtgctccagggcaacct 10476


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,526,266
Number of Sequences: 3902068
Number of extensions: 4526266
Number of successful extensions: 80810
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80504
Number of HSP's gapped (non-prelim): 299
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result