>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 501  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 560
            ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1642 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 1583

                  
Query: 561  tcaagt 566
            ||||||
Sbjct: 1582 tcaagt 1577

>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 501 ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 560
           ||||| |||||||| || || |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 820 ggcggagtctgtggcttcggagctggctttggtttagtcatgatcggtttgcagaacctg 761

                 
Query: 561 tcaagt 566
           ||||||
Sbjct: 760 tcaagt 755

>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 501  ggcggggtctgtggttttggcgctggccttggtttggtcatgatgggtttgcagaacctg 560
            ||||| ||||| || || || |||||| | ||||| |||||||| || ||||||||||| 
Sbjct: 1484 ggcggagtctgcggcttaggagctggcttcggtttcgtcatgatcggcttgcagaaccta 1425

                  
Query: 561  tcaagt 566
            ||||||
Sbjct: 1424 tcaagt 1419

>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence
          Length = 170072

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    ccgtagataaaaattacaacg 84
             |||||||||||||||||||||
Sbjct: 86431 ccgtagataaaaattacaacg 86411

>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 129950

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 211   aaacactgcagaaactctcca 231
             |||||||||||||||||||||
Sbjct: 94033 aaacactgcagaaactctcca 94053

>emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chromosome 13 Contains a
              hepatocyte nuclear factor 4 alpha (HNF4A) pseudogene,
              complete sequence
          Length = 172342

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    aaacactgcagaaactctcca 231
              |||||||||||||||||||||
Sbjct: 159807 aaacactgcagaaactctcca 159787

>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17
          Length = 1645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 gtatgaaaacagccattcctt 275
           |||||||||||||||||||||
Sbjct: 495 gtatgaaaacagccattcctt 475

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 330      tctcctcagatcgacacctct 350
                |||||||||||||||||||||
Sbjct: 23968123 tctcctcagatcgacacctct 23968143



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 330     tctcctcagatcgacacctct 350
               |||||||||||||||||||||
Sbjct: 6273780 tctcctcagatcgacacctct 6273760

>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   tctcctcagatcgacacctct 350
             |||||||||||||||||||||
Sbjct: 71167 tctcctcagatcgacacctct 71147

>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1476_F05
          Length = 125426

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 330  tctcctcagatcgacacctct 350
            |||||||||||||||||||||
Sbjct: 3161 tctcctcagatcgacacctct 3181

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    tctcctcagatcgacacctct 350
              |||||||||||||||||||||
Sbjct: 102087 tctcctcagatcgacacctct 102107

>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
             complete sequence
          Length = 150825

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tccgtagtgaccaaaatttc 46
             ||||||||||||||||||||
Sbjct: 76892 tccgtagtgaccaaaatttc 76911

>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    tgctcacccacatgctcatc 406
              ||||||||||||||||||||
Sbjct: 100132 tgctcacccacatgctcatc 100113

>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0014K18, complete sequence
          Length = 123508

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   tccgtagtgaccaaaatttc 46
            ||||||||||||||||||||
Sbjct: 1442 tccgtagtgaccaaaatttc 1461

>gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, complete sequence
          Length = 152039

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gataaaaattacaacgttat 88
             ||||||||||||||||||||
Sbjct: 81064 gataaaaattacaacgttat 81045

>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tttgattgttcttctggtgt 469
             ||||||||||||||||||||
Sbjct: 76801 tttgattgttcttctggtgt 76782

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 27       tccgtagtgaccaaaatttc 46
                ||||||||||||||||||||
Sbjct: 19748818 tccgtagtgaccaaaatttc 19748837

>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete
             sequence
          Length = 181773

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gaaactctccatgttctact 240
             ||||||||||||||||||||
Sbjct: 59334 gaaactctccatgttctact 59315

>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tatcggtgtccatttgctca 392
              ||||||||||||||||||||
Sbjct: 144817 tatcggtgtccatttgctca 144836

>ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 gtggttttggcgctggcctt 530
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165

>gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing glucosidase I mRNA,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 gtggttttggcgctggcctt 530
           ||||||||||||||||||||
Sbjct: 146 gtggttttggcgctggcctt 165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,031,901
Number of Sequences: 3902068
Number of extensions: 5031901
Number of successful extensions: 78668
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78565
Number of HSP's gapped (non-prelim): 103
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)