ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27n15 |
|---|---|
| Clone Library Name | barley_pub |
>IF1A_WHEAT (P47815) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 149 bits (375), Expect = 2e-36 Identities = 75/92 (81%), Positives = 76/92 (82%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DGTKRLCHIRGKMH KVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT Sbjct: 52 DGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 +RLN DYIQFEDEDIDKI Sbjct: 112 VRLNEGVDVDGPEEGEGDSDYIQFEDEDIDKI 143
>IF1A_ONOVI (P56331) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 144 Score = 135 bits (339), Expect = 3e-32 Identities = 70/93 (75%), Positives = 72/93 (77%), Gaps = 1/93 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DGTKRLCHIRGKMH KVWIAAGDI+LVGLRDYQDDKADVILK M DEARLLKAYGELPD Sbjct: 52 DGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDN 111 Query: 213 LRLN-XXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 RLN DYI+FEDEDIDKI Sbjct: 112 TRLNEGIGAGGLDEEMDTANDYIEFEDEDIDKI 144
>IF1AY_PANTR (Q6GVM3) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 106 bits (264), Expect = 2e-23 Identities = 55/92 (59%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEVQFDDIGDDDEDIDDI 143
>IF1AY_HUMAN (O14602) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 106 bits (264), Expect = 2e-23 Identities = 55/92 (59%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1AX_PONPY (Q5RA42) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 106 bits (264), Expect = 2e-23 Identities = 55/92 (59%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1AX_MOUSE (Q8BMJ3) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 106 bits (264), Expect = 2e-23 Identities = 55/92 (59%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1AX_HUMAN (P47813) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 106 bits (264), Expect = 2e-23 Identities = 55/92 (59%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1A_RAT (Q6VV72) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) (Liver regeneration-related protein LRRG048) Length = 143 Score = 104 bits (260), Expect = 4e-23 Identities = 53/92 (57%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG +RLCHIRGK+ KVWI DI+L+GLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1A_MOUSE (Q60872) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) Length = 143 Score = 104 bits (260), Expect = 4e-23 Identities = 53/92 (57%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG +RLCHIRGK+ KVWI DI+L+GLRDYQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1AH_HUMAN (O75642) Putative eukaryotic translation initiation factor 1A| (eIF-1A) (eIF-4C) Length = 143 Score = 104 bits (260), Expect = 4e-23 Identities = 54/92 (58%), Positives = 62/92 (67%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRLCHIRGK+ KVWI DI+LVGLRDYQD+KADVILKY DEAR L+AYGELP+ Sbjct: 52 DGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLQAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1A_RABIT (P47814) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 100 bits (249), Expect = 8e-22 Identities = 53/92 (57%), Positives = 61/92 (66%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRL HIRGK+ KVWI DI+LVGLR+YQD+KADVILKY DEAR LKAYGELP+ Sbjct: 52 DGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEH 111 Query: 213 LRLNXXXXXXXXXXXXXXXDYIQFEDEDIDKI 118 ++N D I +DEDID I Sbjct: 112 AKINETDTFGPGDDDEIQFDDIGDDDEDIDDI 143
>IF1A_SCHPO (P55877) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 138 Score = 89.0 bits (219), Expect = 3e-18 Identities = 41/64 (64%), Positives = 50/64 (78%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KRL HIRGK+ KVWI GDI+L+ LR++QD+K DVILKY DEAR LK GELP+T Sbjct: 53 DGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPET 112 Query: 213 LRLN 202 ++N Sbjct: 113 AKIN 116
>IF1A_YEAST (P38912) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 153 Score = 85.9 bits (211), Expect = 2e-17 Identities = 38/64 (59%), Positives = 48/64 (75%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG KR+ HIRGK+ KVW+ GDI+LV LRD+QDD+ DV+ KY DEAR LK GELP+ Sbjct: 53 DGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPEN 112 Query: 213 LRLN 202 ++N Sbjct: 113 AKIN 116
>IF1A_SULSO (Q97W62) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 57.4 bits (137), Expect = 8e-09 Identities = 24/51 (47%), Positives = 36/51 (70%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLL 241 DG +RL I GK+ K+W+ GD+VLVG+ D+Q ++ D++ KY NDE + L Sbjct: 42 DGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
>IF1A_ARCFU (O29481) Translation initiation factor 1A (aIF-1A)| Length = 97 Score = 53.9 bits (128), Expect = 9e-08 Identities = 24/57 (42%), Positives = 35/57 (61%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG +RL I GKM K+WI GD+V+V +Q D+AD++ +Y N + L+ G L Sbjct: 39 DGVERLARIPGKMRKKIWIREGDVVIVVPWSFQKDRADIVWRYTNPQVEWLERKGYL 95
>IF1A_PICTO (Q6L2G4) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/61 (39%), Positives = 36/61 (59%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG R C I GKM ++WI GD+V+V ++QD+K D+I +Y +A L LP+ Sbjct: 41 DGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEKGDIIYRYTKTQAAYLSRNHMLPEI 100 Query: 213 L 211 + Sbjct: 101 I 101
>IF1A_SULTO (Q974Z9) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLK 238 DG +RL I GKM K+W+ GD+VL D+Q +K D+I KY E R L+ Sbjct: 42 DGKERLGRIPGKMKKKMWVKEGDVVLAAPWDFQPNKCDIIYKYSESEVRRLE 93
>IF1A1_HALSA (Q9HN64) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 95 Score = 51.6 bits (122), Expect = 4e-07 Identities = 25/57 (43%), Positives = 34/57 (59%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG +R I G+M ++WI DIVLV D+QDDKADV +Y +A L+ G + Sbjct: 38 DGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEGHI 94
>IF1A_SULAC (Q4JA54) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 50.8 bits (120), Expect = 8e-07 Identities = 23/51 (45%), Positives = 31/51 (60%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLL 241 DG +RL I GK+ KVWI GD+VL D+Q +K D++ +Y E R L Sbjct: 42 DGKERLGRIPGKLKKKVWIREGDVVLAAPWDFQPNKCDIVYRYTESEVRRL 92
>IF1A_METKA (Q8TXZ3) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/59 (40%), Positives = 35/59 (59%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPD 217 DG R+ I GKM +VWI GD+VLV ++Q ++ADV +Y + LK G+L + Sbjct: 40 DGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
>IF1A1_METAC (Q8TSA3) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 47.4 bits (111), Expect = 8e-06 Identities = 24/57 (42%), Positives = 33/57 (57%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG R+ I G M K WI GD+V+V ++Q++KADVI KY + L+ G L Sbjct: 53 DGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKYTRPQVDWLERKGYL 109
>IF1A2_HALSA (Q9HP87) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 94 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/57 (38%), Positives = 35/57 (61%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG +R+ I G+M + WI GD+VL D+QD+KA+V +Y + +A L+ G + Sbjct: 37 DGKERMGRIPGRMKYRTWINEGDVVLAEPWDWQDEKANVEWRYSDQDADQLREEGHI 93
>IF1A_METTH (O27085) Translation initiation factor 1A (aIF-1A)| Length = 99 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQ-DDKADVILKYMNDEARLLKAYGEL 223 DG RL I GKM ++WI GD+VLV ++Q ++KAD++ +Y E+ L+ G L Sbjct: 40 DGHIRLGRIPGKMKKRIWIREGDVVLVKPWEFQSEEKADIVWRYTRTESNWLERKGYL 97
>IF1A2_METAC (Q8TR33) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 105 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG R+ I G + K+WI GD+V+V + QD KADVI KY + L+ G L Sbjct: 48 DGVVRMGRIPGSKNKKMWIREGDVVIVTPWEIQDTKADVIWKYTRPQIEWLERKGYL 104
>IF1A1_METMA (Q8PVF1) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 45.8 bits (107), Expect = 2e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG R+ I G M K WI GD+V+ ++Q++KADVI KY + L+ G L Sbjct: 53 DGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEKADVIWKYTRPQVDWLERKGYL 109
>IF1A2_METMA (Q8PUJ8) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 106 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/57 (42%), Positives = 31/57 (54%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG R+ I G + K+WI GDIV+ + QD KADVI KY + L+ G L Sbjct: 49 DGVVRMGRIPGSKNKKMWIREGDIVIATPWEIQDSKADVIWKYTRPQIEWLERKGYL 105
>IF1A_PYRAE (Q8ZXV9) Translation initiation factor 1A (aIF-1A)| Length = 114 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYG 229 DG R+ + G++ ++W+ AGD V+V L D+ +K D++ KY + LK G Sbjct: 48 DGQIRVARLPGRLRRRLWLKAGDYVIVALWDFDREKGDIVHKYEKRDVEELKRRG 102
>IF1A3_METAC (Q8TR31) Translation initiation factor 1A-3 (aIF-1A-3)| Length = 110 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGEL 223 DG R+ I G + K+W+ GD+V+ + QD KADVI KY + L+ G L Sbjct: 53 DGVVRMGRIPGSKNKKMWVREGDVVIANPWEIQDSKADVIWKYTKPQVDWLERKGYL 109
>IF1A_THEVO (Q979F7) Translation initiation factor 1A (aIF-1A)| Length = 123 Score = 44.7 bits (104), Expect = 5e-05 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG R I G+M ++WI D+V+V ++Q +KADV+ +Y +A L LP+ Sbjct: 59 DGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPEV 118 Query: 213 L 211 + Sbjct: 119 I 119
>IF1A_AERPE (P57676) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG + I GKM +VW+ GD+VL D K +V+ +Y+ DE R L LP+ Sbjct: 43 DGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKKGEVVYRYLRDEVRKLIDMNLLPEE 102 Query: 213 L 211 L Sbjct: 103 L 103
>IF1A_THEAC (Q03590) Translation initiation factor 1A (aIF-1A)| Length = 119 Score = 44.7 bits (104), Expect = 5e-05 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT 214 DG R I G+M ++WI D+V+V ++Q +KADV+ +Y +A L LP+ Sbjct: 55 DGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPEV 114 Query: 213 L 211 + Sbjct: 115 I 115
>IF1A_METJA (Q57887) Translation initiation factor 1A (aIF-1A)| Length = 102 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQ-DDKADVILKYMNDEARLLKAYGELPD 217 DG RL I G++ ++W+ GD+V+V + Q D K D+I +Y + LK G L + Sbjct: 41 DGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQKCDIIWRYTKTQVEWLKRKGYLDE 100 Query: 216 TL 211 L Sbjct: 101 LL 102
>IF1A_PYRHO (O59280) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDK-ADVILKYMNDEARLLKAYGEL 223 DG R C I GK+ +VWI GD+V+V Q DK D++ +Y + L G++ Sbjct: 45 DGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKRGDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRFU (Q8U0K5) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDK-ADVILKYMNDEARLLKAYGEL 223 DG R C I G++ +VWI GD+V+V Q DK D++ +Y + L G++ Sbjct: 45 DGKVRRCRIPGRLRRRVWIKVGDLVIVEPWPVQSDKRGDIVYRYTQTQVEWLLRKGKI 102
>IF1A_PYRAB (Q9V138) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDK-ADVILKYMNDEARLLKAYGEL 223 DG R C I GK+ +VWI GD+V+V Q DK D++ +Y + L G++ Sbjct: 45 DGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKRGDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRKO (Q5JH78) Translation initiation factor 1A (aIF-1A)| Length = 117 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQ-DDKADVILKYMNDEARLLKAYGEL 223 DG R C I GK+ ++W+ GD+V+V Q D++ D++ +Y + L G++ Sbjct: 48 DGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPVQSDERGDIVYRYTRTQVDWLLRKGKI 105
>IF1A_METMP (Q6LZM1) Translation initiation factor 1A (aIF-1A)| Length = 104 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 393 DGTKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQ-DDKADVILKYMNDEARLLKAYGEL 223 DG R+ I GK+ K+W+ D+V+V + Q D+K DVI +Y + L G L Sbjct: 43 DGKLRMGRIPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYTKGQVDWLNRKGYL 100
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 32.7 bits (73), Expect = 0.21 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%) Frame = -3 Query: 115 SFFFSSPR---LASPLYFLFYSVLIACARPSLSVCIGRWAV 2 SFFF+ PR LASPL FLF+S I A P + +G +A+ Sbjct: 406 SFFFAIPRVIFLASPLAFLFFSQNIIAASP---LAVGVYAI 443
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = -3 Query: 115 SFFFSSPR---LASPLYFLFYSVLIACARP 35 SFFF+ PR LASPL FLF+ I A P Sbjct: 406 SFFFAIPRVIFLASPLAFLFFGQNIIAASP 435
>TYSY_SHEON (Q8EH94) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = -1 Query: 387 TKRLCHIRGKMHXKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYG 229 T + CH+R +H +W GD + LR D+K + ++ ++ L YG Sbjct: 46 TTKKCHMRSIIHELLWFLKGDTNIAYLR---DNKVSIWDEWADENGDLGPVYG 95
>IF1_MYCH2 (Q601J2) Translation initiation factor IF-1| Length = 75 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = -1 Query: 393 DGTKRLCHIRGKM---HXKVWIAAGDIVLVGLRDYQDDKADVILKY 265 +G K CHI GKM H K+ I GD+V V + Y K ++ ++ Sbjct: 31 NGIKLNCHIAGKMKIHHIKIII--GDMVKVEISPYDLSKGRIVYRF 74
>BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 756 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -3 Query: 115 SFFFSSPR---LASPLYFLFYSVLIACARP 35 SFFF+ PR LASPL FLF I A P Sbjct: 408 SFFFAIPRVIFLASPLAFLFAGQNIIAAAP 437
>CHLD_SYNP7 (O07345) Magnesium-chelatase subunit chlD (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 677 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -1 Query: 282 DVILKYMNDEARLLKAYGELPDTLR 208 D L+Y ND A++L+AY E ++LR Sbjct: 225 DQALRYANDPAKVLEAYAEETESLR 249
>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi| complex-associated protein of 170 kDa) (GCP170) Length = 1498 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 25 QTRTDARTLLEQNRTESIEARRGEARRRK 111 + + + +TLL+QN+ ++ RRG A+ RK Sbjct: 1355 ELKNNMKTLLQQNQQLKLDLRRGAAKTRK 1383
>RIMM_BARHE (Q6G1R8) Probable 16S rRNA-processing protein rimM| Length = 180 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 288 KADVILKYMNDEARLLKAYGELPD 217 K DV+LK ++ E + LK YG L D Sbjct: 24 KGDVLLKILSSEPQRLKTYGTLYD 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.128 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,751,189 Number of Sequences: 219361 Number of extensions: 466053 Number of successful extensions: 1086 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 1073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1084 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
