ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27n14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 474 e-130
2gb|BT017270.1| Zea mays clone EL01N0312E10.c mRNA sequence 343 4e-91
3gb|AY109412.1| Zea mays CL3751_1 mRNA sequence 335 9e-89
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 274 3e-70
5gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 274 3e-70
6gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 274 3e-70
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 274 3e-70
8gb|DQ226613.1| Boechera divaricarpa isolate SLW-3-G03 mRNA sequence 70 8e-09
9ref|NM_124662.2| Arabidopsis thaliana oxidoreductase, acting on ... 56 1e-04
10gb|AY079117.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, comp... 56 1e-04
11gb|AY054251.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, comp... 56 1e-04
12emb|BX833220.1|CNS0A1UY Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
13dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.008
14gb|AC073632.4| Homo sapiens BAC clone RP11-202H24 from 2, comple... 44 0.47
15gb|AE009357.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.8
16gb|AE008255.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.8
17gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.8
18emb|AL389921.12| Human DNA sequence from clone RP11-228G5 on chr... 42 1.8
19gb|AE005962.1| Caulobacter crescentus CB15 section 288 of 359 of... 42 1.8
20gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 o... 42 1.8
21gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cance... 40 7.3
22ref|XM_464309.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
23ref|NM_001016021.2| Xenopus tropicalis hypothetical protein LOC5... 40 7.3
24gb|BC085002.1| Xenopus tropicalis cDNA clone IMAGE:7029264 40 7.3
25gb|BC084194.1| Xenopus laevis orthodenticle homolog 5, mRNA (cDN... 40 7.3
26gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 7.3
27ref|XM_370515.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 7.3
28gb|BC077545.1| Xenopus laevis OTX5b protein, mRNA (cDNA clone MG... 40 7.3
29gb|BC058629.1| Mus musculus RIKEN cDNA 4121402D02 gene, mRNA (cD... 40 7.3
30gb|AC145838.3| Microcebus murinus clone CH257-311F17, complete s... 40 7.3
31ref|NM_001032797.1| Ciona intestinalis presenilin-like protein 3... 40 7.3
32ref|XM_994112.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.3
33ref|XM_994091.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.3
34ref|XM_994132.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.3
35gb|AC140191.2| Mus musculus BAC clone RP24-375E1 from chromosome... 40 7.3
36gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome... 40 7.3
37ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface prot... 40 7.3
38gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosom... 40 7.3
39gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosom... 40 7.3
40emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chro... 40 7.3
41emb|AL356423.15| Human DNA sequence from clone RP11-295B17 on ch... 40 7.3
42gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of... 40 7.3
43emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 7.3
44emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 7.3
45emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (... 40 7.3
46emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on ch... 40 7.3
47gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, compl... 40 7.3
48ref|NM_028722.1| Mus musculus RIKEN cDNA 4121402D02 gene (412140... 40 7.3
49gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, comple... 40 7.3
50gb|AC011346.5| Homo sapiens chromosome 5 clone CTC-295J13, compl... 40 7.3
51dbj|AK053719.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 7.3
52dbj|AK014463.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.3
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
54gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, co... 40 7.3
55dbj|AB178233.2| Ciona intestinalis Ci-PSL3 mRNA for presenilin-l... 40 7.3
56dbj|AK173583.1| Ciona intestinalis cDNA, clone:cicl001g08, full ... 40 7.3
57dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
58dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
59gb|AY105501.1| Zea mays PCO142408 mRNA sequence 40 7.3
60emb|CR848167.2| Xenopus tropicalis finished cDNA, clone TGas127o03 40 7.3
61gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.3
62dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 7.3
63gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, compl... 40 7.3
64gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 7.3
65emb|AL590963.11| Mouse DNA sequence from clone RP23-395E10 on ch... 40 7.3
66dbj|AB034702.1| Xenopus laevis Xotx5 mRNA, complete cds 40 7.3 
>dbj|AK068580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157B08, full
           insert sequence
          Length = 873

 Score =  474 bits (239), Expect = e-130
 Identities = 337/370 (91%)
 Strand = Plus / Minus

                                                                       
Query: 168 atcttgaagagttcaagtttttatgacttcacttgcggaggagagtcaccctgcagagct 227
           |||||| |||||||| || ||||||  |||||||| |||||||| |||||||||||||| 
Sbjct: 637 atcttggagagttcacgtctttatggtttcacttgaggaggagactcaccctgcagagca 578

                                                                       
Query: 228 ggatctgacttgatggcatctagtgtcttgaagaactcctcgggtagtgcaacgggccgg 287
           ||||| || ||||  |||||||||||||||||||||||||| || |||||||| ||||| 
Sbjct: 577 ggatcagatttgacagcatctagtgtcttgaagaactcctcagggagtgcaacaggccga 518

                                                                       
Query: 288 tgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtagtca 347
           |||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||||||
Sbjct: 517 tgctgcggaacatgtttcgggataagtgtgtcatcttcaataacctcgcattcatagtca 458

                                                                       
Query: 348 tcaggaacaccccagggatcccactcgatcatcttgccgatgagcttgagctcgtcctgg 407
           |||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 457 tcaggaacaccccatgggtcccattcgatcatcttggcgatgagcttgagctcgtcctgg 398

                                                                       
Query: 408 gcctnctcgatgagctcttcaacctggccgcagccgaggcggtcctcgatgcgcttccag 467
           |||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 397 gcctcctcgatgagctcctcgacctggccgcagccgatgcggtcctcgatgcgcttccag 338

                                                                       
Query: 468 tcctcctcctcctggcagatctggaggcgatggcgggtgaaggactcgacggccttgcgg 527
           || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 337 tcgtcctcctcctggcagatctggaggcggtggcgggtgaaggactcgacggccttgcgg 278

                     
Query: 528 tagccctcgt 537
           ||||||||||
Sbjct: 277 tagccctcgt 268



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 102 atattgcaggcaaaggacacatgaaacta 130
           ||||||| ||||||| |||||||||||||
Sbjct: 708 atattgctggcaaagaacacatgaaacta 680
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>gb|BT017270.1| Zea mays clone EL01N0312E10.c mRNA sequence
          Length = 800

 Score =  343 bits (173), Expect = 4e-91
 Identities = 301/344 (87%)
 Strand = Plus / Minus

                                                                       
Query: 194 cttcacttgcggaggagagtcaccctgcagagctggatctgacttgatggcatctagtgt 253
           ||||||||| |||||||  || || || || || |||||||| |||| ||||||||||||
Sbjct: 589 cttcacttgaggaggagcatcgccttggagggcgggatctgatttgacggcatctagtgt 530

                                                                       
Query: 254 cttgaagaactcctcgggtagtgcaacgggccggtgctgcggaacatgcttgggaatagg 313
           ||||||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 529 cttgaagaactcctcaggaagagcaacgggccggtgctgaggaacatgcttaggaattgg 470

                                                                       
Query: 314 tgtgttatcttcaatcacctcgcattcgtagtcatcaggaacaccccagggatcccactc 373
            ||||  |||||||||||||| ||||||||||||||||| |||||||| |||||||| ||
Sbjct: 469 ggtgtcgtcttcaatcacctcacattcgtagtcatcagggacaccccacggatcccattc 410

                                                                       
Query: 374 gatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacctg 433
            ||||| ||| ||||||||||||||||||||| ||||| |||||||||||| || || ||
Sbjct: 409 aatcattttggcgatgagcttgagctcgtcctcggcctcctcgatgagctcctcgacttg 350

                                                                       
Query: 434 gccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctggag 493
            ||||| ||||  ||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 349 cccgcatccgattcggtcctcgatgcacatccagtcgtcctcctcctggcagatctggag 290

                                                       
Query: 494 gcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
           ||| ||   |||||||||||| ||||||||||||||||||||||
Sbjct: 289 gcggtgattggtgaaggactcaacggccttgcggtagccctcgt 246
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>gb|AY109412.1| Zea mays CL3751_1 mRNA sequence
          Length = 1279

 Score =  335 bits (169), Expect = 9e-89
 Identities = 300/344 (87%)
 Strand = Plus / Minus

                                                                       
Query: 194 cttcacttgcggaggagagtcaccctgcagagctggatctgacttgatggcatctagtgt 253
           ||||||||| |||||||  || || || ||||| ||||| || ||||  |||||||||| 
Sbjct: 580 cttcacttgaggaggagcatcgccttgaagagcaggatcagatttgacagcatctagtgc 521

                                                                       
Query: 254 cttgaagaactcctcgggtagtgcaacgggccggtgctgcggaacatgcttgggaatagg 313
           ||||||||||||||| || || ||||| ||||||||||| ||||||||||| ||||| ||
Sbjct: 520 cttgaagaactcctcaggaagagcaacaggccggtgctgaggaacatgcttaggaattgg 461

                                                                       
Query: 314 tgtgttatcttcaatcacctcgcattcgtagtcatcaggaacaccccagggatcccactc 373
            ||||  |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 460 ggtgtcgtcttcaatcacctcacattcgtagtcatcgggaacaccccatggatcccattc 401

                                                                       
Query: 374 gatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacctg 433
            ||||| ||  ||||||||||||||||||||| ||||| |||||||||||| || |||||
Sbjct: 400 aatcattttagcgatgagcttgagctcgtcctcggcctcctcgatgagctcctcgacctg 341

                                                                       
Query: 434 gccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctggag 493
            ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cccgcatccgattcggtcctcgatgcgcttccagtcctcctcctcctggcagatctggag 281

                                                       
Query: 494 gcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
           ||| || | ||||||||| || |||||||||||||| |||||||
Sbjct: 280 gcggtgaccggtgaaggattcaacggccttgcggtaaccctcgt 237
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  274 bits (138), Expect = 3e-70
 Identities = 158/165 (95%)
 Strand = Plus / Minus

                                                                            
Query: 373      cgatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacct 432
                ||||||||||| ||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 11154580 cgatcatcttggcgatgagcttgagctcgtcctgggcctcctcgatgagctcctcgacct 11154521

                                                                            
Query: 433      ggccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctgga 492
                |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 11154520 ggccgcagccgatgcggtcctcgatgcgcttccagtcgtcctcctcctggcagatctgga 11154461

                                                             
Query: 493      ggcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
                |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11154460 ggcggtggcgggtgaaggactcgacggccttgcggtagccctcgt 11154416



 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Minus

                                                                            
Query: 168      atcttgaagagttcaagtttttatgacttcacttgcggaggagagtcaccctgcagagct 227
                |||||| |||||||| || ||||||  |||||||| |||||||| |||||||||||||| 
Sbjct: 11156816 atcttggagagttcacgtctttatggtttcacttgaggaggagactcaccctgcagagca 11156757

                                                                            
Query: 228      ggatctgacttgatggcatctagtgtcttgaagaactcctcgggtagtgcaacgggccgg 287
                ||||| || ||||  |||||||||||||||||||||||||| || |||||||| ||||| 
Sbjct: 11156756 ggatcagatttgacagcatctagtgtcttgaagaactcctcagggagtgcaacaggccga 11156697

                                                                            
Query: 288      tgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtagtca 347
                |||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||||||
Sbjct: 11156696 tgctgcggaacatgtttcgggataagtgtgtcatcttcaataacctcgcattcatagtca 11156637

                                       
Query: 348      tcaggaacaccccagggatccca 370
                |||||||||||||| || |||||
Sbjct: 11156636 tcaggaacaccccatgggtccca 11156614



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 102      atattgcaggcaaaggacacatgaaacta 130
                ||||||| ||||||| |||||||||||||
Sbjct: 11156887 atattgctggcaaagaacacatgaaacta 11156859
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>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score =  274 bits (138), Expect = 3e-70
 Identities = 158/165 (95%)
 Strand = Plus / Minus

                                                                         
Query: 373   cgatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacct 432
             ||||||||||| ||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 67937 cgatcatcttggcgatgagcttgagctcgtcctgggcctcctcgatgagctcctcgacct 67878

                                                                         
Query: 433   ggccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctgga 492
             |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 67877 ggccgcagccgatgcggtcctcgatgcgcttccagtcgtcctcctcctggcagatctgga 67818

                                                          
Query: 493   ggcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
             |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 67817 ggcggtggcgggtgaaggactcgacggccttgcggtagccctcgt 67773



 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Minus

                                                                         
Query: 168   atcttgaagagttcaagtttttatgacttcacttgcggaggagagtcaccctgcagagct 227
             |||||| |||||||| || ||||||  |||||||| |||||||| |||||||||||||| 
Sbjct: 70173 atcttggagagttcacgtctttatggtttcacttgaggaggagactcaccctgcagagca 70114

                                                                         
Query: 228   ggatctgacttgatggcatctagtgtcttgaagaactcctcgggtagtgcaacgggccgg 287
             ||||| || ||||  |||||||||||||||||||||||||| || |||||||| ||||| 
Sbjct: 70113 ggatcagatttgacagcatctagtgtcttgaagaactcctcagggagtgcaacaggccga 70054

                                                                         
Query: 288   tgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtagtca 347
             |||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||||||
Sbjct: 70053 tgctgcggaacatgtttcgggataagtgtgtcatcttcaataacctcgcattcatagtca 69994

                                    
Query: 348   tcaggaacaccccagggatccca 370
             |||||||||||||| || |||||
Sbjct: 69993 tcaggaacaccccatgggtccca 69971



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 102   atattgcaggcaaaggacacatgaaacta 130
             ||||||| ||||||| |||||||||||||
Sbjct: 70244 atattgctggcaaagaacacatgaaacta 70216
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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score =  274 bits (138), Expect = 3e-70
 Identities = 158/165 (95%)
 Strand = Plus / Plus

                                                                          
Query: 373    cgatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacct 432
              ||||||||||| ||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 126149 cgatcatcttggcgatgagcttgagctcgtcctgggcctcctcgatgagctcctcgacct 126208

                                                                          
Query: 433    ggccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctgga 492
              |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 126209 ggccgcagccgatgcggtcctcgatgcgcttccagtcgtcctcctcctggcagatctgga 126268

                                                           
Query: 493    ggcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
              |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126269 ggcggtggcgggtgaaggactcgacggccttgcggtagccctcgt 126313



 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                          
Query: 168    atcttgaagagttcaagtttttatgacttcacttgcggaggagagtcaccctgcagagct 227
              |||||| |||||||| || ||||||  |||||||| |||||||| |||||||||||||| 
Sbjct: 123913 atcttggagagttcacgtctttatggtttcacttgaggaggagactcaccctgcagagca 123972

                                                                          
Query: 228    ggatctgacttgatggcatctagtgtcttgaagaactcctcgggtagtgcaacgggccgg 287
              ||||| || ||||  |||||||||||||||||||||||||| || |||||||| ||||| 
Sbjct: 123973 ggatcagatttgacagcatctagtgtcttgaagaactcctcagggagtgcaacaggccga 124032

                                                                          
Query: 288    tgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtagtca 347
              |||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||||||
Sbjct: 124033 tgctgcggaacatgtttcgggataagtgtgtcatcttcaataacctcgcattcatagtca 124092

                                     
Query: 348    tcaggaacaccccagggatccca 370
              |||||||||||||| || |||||
Sbjct: 124093 tcaggaacaccccatgggtccca 124115



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 102    atattgcaggcaaaggacacatgaaacta 130
              ||||||| ||||||| |||||||||||||
Sbjct: 123842 atattgctggcaaagaacacatgaaacta 123870
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  274 bits (138), Expect = 3e-70
 Identities = 158/165 (95%)
 Strand = Plus / Minus

                                                                            
Query: 373      cgatcatcttgccgatgagcttgagctcgtcctgggcctnctcgatgagctcttcaacct 432
                ||||||||||| ||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 11151343 cgatcatcttggcgatgagcttgagctcgtcctgggcctcctcgatgagctcctcgacct 11151284

                                                                            
Query: 433      ggccgcagccgaggcggtcctcgatgcgcttccagtcctcctcctcctggcagatctgga 492
                |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 11151283 ggccgcagccgatgcggtcctcgatgcgcttccagtcgtcctcctcctggcagatctgga 11151224

                                                             
Query: 493      ggcgatggcgggtgaaggactcgacggccttgcggtagccctcgt 537
                |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11151223 ggcggtggcgggtgaaggactcgacggccttgcggtagccctcgt 11151179



 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Minus

                                                                            
Query: 168      atcttgaagagttcaagtttttatgacttcacttgcggaggagagtcaccctgcagagct 227
                |||||| |||||||| || ||||||  |||||||| |||||||| |||||||||||||| 
Sbjct: 11153579 atcttggagagttcacgtctttatggtttcacttgaggaggagactcaccctgcagagca 11153520

                                                                            
Query: 228      ggatctgacttgatggcatctagtgtcttgaagaactcctcgggtagtgcaacgggccgg 287
                ||||| || ||||  |||||||||||||||||||||||||| || |||||||| ||||| 
Sbjct: 11153519 ggatcagatttgacagcatctagtgtcttgaagaactcctcagggagtgcaacaggccga 11153460

                                                                            
Query: 288      tgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtagtca 347
                |||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||||||
Sbjct: 11153459 tgctgcggaacatgtttcgggataagtgtgtcatcttcaataacctcgcattcatagtca 11153400

                                       
Query: 348      tcaggaacaccccagggatccca 370
                |||||||||||||| || |||||
Sbjct: 11153399 tcaggaacaccccatgggtccca 11153377



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 102      atattgcaggcaaaggacacatgaaacta 130
                ||||||| ||||||| |||||||||||||
Sbjct: 11153650 atattgctggcaaagaacacatgaaacta 11153622
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>gb|DQ226613.1| Boechera divaricarpa isolate SLW-3-G03 mRNA sequence
          Length = 535

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                       
Query: 285 cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
           ||||||||||||||||| ||||| || ||||  | ||  ||||| || ||||| ||||| 
Sbjct: 137 cggtgctgcggaacatgtttgggtatcggtgcatcattctcaatgacttcgcactcgtaa 196

                                              
Query: 345 tcatcaggaacaccccagggatcccactcgatcat 379
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 197 tcatctggaacaccccaaggatcccattcgatcat 231
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>ref|NM_124662.2| Arabidopsis thaliana oxidoreductase, acting on NADH or NADPH
           AT5G52840 mRNA, complete cds
          Length = 786

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 285 cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
           |||||||| ||||||||||| ||||| || |  | ||  |||||||| || || ||||| 
Sbjct: 465 cggtgctgaggaacatgctttggaatcggcgcatcattctcaatcacttcacactcgtaa 406

                                                                   
Query: 345 tcatcaggaacaccccagggatcccactcgatcatcttgccgatgagcttgagctc 400
           ||||| || |||||||| ||||||||||| ||||| || || |||||  |||||||
Sbjct: 405 tcatctggtacaccccaaggatcccactcaatcattttcccaatgagtgtgagctc 350
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>gb|AY079117.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, complete cds
          Length = 510

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 285 cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
           |||||||| ||||||||||| ||||| || |  | ||  |||||||| || || ||||| 
Sbjct: 401 cggtgctgaggaacatgctttggaatcggcgcatcattctcaatcacttcacactcgtaa 342

                                                                   
Query: 345 tcatcaggaacaccccagggatcccactcgatcatcttgccgatgagcttgagctc 400
           ||||| || |||||||| ||||||||||| ||||| || || |||||  |||||||
Sbjct: 341 tcatctggtacaccccaaggatcccactcaatcattttcccaatgagtgtgagctc 286
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>gb|AY054251.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, complete cds
          Length = 737

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 285 cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
           |||||||| ||||||||||| ||||| || |  | ||  |||||||| || || ||||| 
Sbjct: 465 cggtgctgaggaacatgctttggaatcggcgcatcattctcaatcacttcacactcgtaa 406

                                                                   
Query: 345 tcatcaggaacaccccagggatcccactcgatcatcttgccgatgagcttgagctc 400
           ||||| || |||||||| ||||||||||| ||||| || || |||||  |||||||
Sbjct: 405 tcatctggtacaccccaaggatcccactcaatcattttcccaatgagtgtgagctc 350
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>emb|BX833220.1|CNS0A1UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL39ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 724

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 285 cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
           |||||||| ||||||||||| ||||| || |  | ||  |||||||| || || ||||| 
Sbjct: 444 cggtgctgaggaacatgctttggaatcggcgcatcattctcaatcacttcacactcgtaa 385

                                                                   
Query: 345 tcatcaggaacaccccagggatcccactcgatcatcttgccgatgagcttgagctc 400
           ||||| || |||||||| ||||||||||| ||||| || || |||||  |||||||
Sbjct: 384 tcatctggtacaccccaaggatcccactcaatcattttcccaatgagtgtgagctc 329
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>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20
          Length = 81575

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 285   cggtgctgcggaacatgcttgggaataggtgtgttatcttcaatcacctcgcattcgtag 344
             |||||||| ||||||||||| ||||| || |  | ||  |||||||| || || ||||| 
Sbjct: 19741 cggtgctgaggaacatgctttggaatcggcgcatcattctcaatcacttcacactcgtaa 19682

                                          
Query: 345   tcatcaggaacaccccagggatcccactc 373
             ||||| || |||||||| |||||||||||
Sbjct: 19681 tcatctggtacaccccaaggatcccactc 19653
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>gb|AC073632.4| Homo sapiens BAC clone RP11-202H24 from 2, complete sequence
          Length = 40132

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 173   gaagagttcaagtttttatgac 194
             ||||||||||||||||||||||
Sbjct: 11286 gaagagttcaagtttttatgac 11307
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>gb|AE009357.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 127 of
            187 of the complete sequence
          Length = 11647

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 440  gccgaggcggtcctcgatgcg 460
            |||||||||||||||||||||
Sbjct: 5606 gccgaggcggtcctcgatgcg 5626
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>gb|AE008255.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 59 of 187
             of the complete sequence
          Length = 10966

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 440   gccgaggcggtcctcgatgcg 460
             |||||||||||||||||||||
Sbjct: 10033 gccgaggcggtcctcgatgcg 10013
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 431     ctggccgcagccgaggcggtc 451
               |||||||||||||||||||||
Sbjct: 4796656 ctggccgcagccgaggcggtc 4796636
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>emb|AL389921.12| Human DNA sequence from clone RP11-228G5 on chromosome 1 Contains part
             of the gene for membrane-associated guanylate
             kinase-related 3 (MAGI-3), complete sequence
          Length = 68764

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     taatagaaaacataaacagtatttt 27
             ||||||||||||| |||||||||||
Sbjct: 65091 taatagaaaacatgaacagtatttt 65115
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>gb|AE005962.1| Caulobacter crescentus CB15 section 288 of 359 of the complete genome
          Length = 10708

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 516   acggccttgcggtagccctcg 536
             |||||||||||||||||||||
Sbjct: 10115 acggccttgcggtagccctcg 10135
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>gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 of the complete
            genome
          Length = 10944

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 512  ctcgacggccttgcggtagccctcg 536
            ||||||||||| |||||||||||||
Sbjct: 6040 ctcgacggcctggcggtagccctcg 6064
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>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221782

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    agtttttatgacttcacttg 202
              ||||||||||||||||||||
Sbjct: 154313 agtttttatgacttcacttg 154332
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>ref|XM_464309.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 cttccagtcctcctcctcct 480
           ||||||||||||||||||||
Sbjct: 172 cttccagtcctcctcctcct 153
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>ref|NM_001016021.2| Xenopus tropicalis hypothetical protein LOC548775 (LOC548775), mRNA
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 508 cagtcctcctcctcctggca 527
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>gb|BC085002.1| Xenopus tropicalis cDNA clone IMAGE:7029264
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 619 cagtcctcctcctcctggca 638
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>gb|BC084194.1| Xenopus laevis orthodenticle homolog 5, mRNA (cDNA clone MGC:79897
           IMAGE:5156432), complete cds
          Length = 2510

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 542 cagtcctcctcctcctggca 561
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 170     cttgaagagttcaagttttt 189
               ||||||||||||||||||||
Sbjct: 4247012 cttgaagagttcaagttttt 4246993
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>ref|XM_370515.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG07012.4) partial mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 cttgccgatgagcttgagct 399
           ||||||||||||||||||||
Sbjct: 627 cttgccgatgagcttgagct 608
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>gb|BC077545.1| Xenopus laevis OTX5b protein, mRNA (cDNA clone MGC:83443
           IMAGE:4740548), complete cds
          Length = 2323

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 608 cagtcctcctcctcctggca 627
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>gb|BC058629.1| Mus musculus RIKEN cDNA 4121402D02 gene, mRNA (cDNA clone MGC:64809
            IMAGE:6402215), complete cds
          Length = 2933

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2156 gatgagcttgagctcgtcct 2175
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>gb|AC145838.3| Microcebus murinus clone CH257-311F17, complete sequence
          Length = 204661

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     ttaaaaacgcattcacattc 66
              ||||||||||||||||||||
Sbjct: 168730 ttaaaaacgcattcacattc 168749
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>ref|NM_001032797.1| Ciona intestinalis presenilin-like protein 3 (PSL3), mRNA
          Length = 1696

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  caactacacactgcaacagg 154
            ||||||||||||||||||||
Sbjct: 1213 caactacacactgcaacagg 1194
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>ref|XM_994112.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 5 (4121402D02Rik), mRNA
          Length = 3193

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 1005 gatgagcttgagctcgtcct 1024
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>ref|XM_994091.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 2 (4121402D02Rik), mRNA
          Length = 4296

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2108 gatgagcttgagctcgtcct 2127
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>ref|XM_994132.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 2 (4121402D02Rik), mRNA
          Length = 4344

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2156 gatgagcttgagctcgtcct 2175
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>gb|AC140191.2| Mus musculus BAC clone RP24-375E1 from chromosome 7, complete sequence
          Length = 164310

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cattcacattcacaggaaca 75
             ||||||||||||||||||||
Sbjct: 15978 cattcacattcacaggaaca 15959
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>gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome 3, complete sequence
          Length = 247498

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tttattctgcttggcagaag 97
              ||||||||||||||||||||
Sbjct: 101334 tttattctgcttggcagaag 101315
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>ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface protease GP63
            (Tc00.1047053507559.110) partial mRNA
          Length = 1968

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 468  tcctcctcctcctggcagatctgg 491
            ||||| ||||||||||||||||||
Sbjct: 1014 tcctcttcctcctggcagatctgg 991
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>gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosome 3, complete sequence
          Length = 188751

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    tttattctgcttggcagaag 97
             ||||||||||||||||||||
Sbjct: 18465 tttattctgcttggcagaag 18446
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>gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosome 19, complete
             sequence
          Length = 189613

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   ctgcaacaggtgacaaatga 164
             ||||||||||||||||||||
Sbjct: 36283 ctgcaacaggtgacaaatga 36264
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>emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chromosome 13, complete
             sequence
          Length = 165011

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 342   tagtcatcaggaacaccccaggga 365
             ||||||| ||||||||||||||||
Sbjct: 44639 tagtcataaggaacaccccaggga 44662
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>emb|AL356423.15| Human DNA sequence from clone RP11-295B17 on chromosome 13 Contains the
              5' end of the STK24 gene for serine/threonine kinase 24, a
              novel gene, a novel pseudogene, a cytochrome c pseudogene,
              a calmodulin 2 (CALM2) pseudogene and a CpG island,
              complete sequence
          Length = 174041

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    ttccagtcctcctcctcctg 481
              ||||||||||||||||||||
Sbjct: 133721 ttccagtcctcctcctcctg 133740
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>gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of the complete genome
          Length = 21440

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 420  agctcttcaacctggccgcagccg 443
            ||||||||||||||||||| ||||
Sbjct: 8863 agctcttcaacctggccgccgccg 8840
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>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              2/8
          Length = 341553

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    cgggtgaaggactcgacggc 520
              ||||||||||||||||||||
Sbjct: 299561 cgggtgaaggactcgacggc 299580
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   agcttgagctcgtcctgggc 409
             ||||||||||||||||||||
Sbjct: 61195 agcttgagctcgtcctgggc 61176
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>emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (otx5b gene)
          Length = 1575

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 677 cagtcctcctcctcctggca 696
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>emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on chromosome 11 Contains
             part of a novel gene and a CpG island, complete sequence
          Length = 218414

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tattctgcttggcagaagca 99
             ||||||||||||||||||||
Sbjct: 82417 tattctgcttggcagaagca 82398
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>gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, complete sequence
          Length = 138073

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    atttattctgcttggcagaagcag 100
             |||||||||||||||||| |||||
Sbjct: 99968 atttattctgcttggcagtagcag 99945
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>ref|NM_028722.1| Mus musculus RIKEN cDNA 4121402D02 gene (4121402D02Rik), mRNA
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2409 gatgagcttgagctcgtcct 2428
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>gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, complete sequence
          Length = 177300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   ggaacaccccagggatccca 370
             ||||||||||||||||||||
Sbjct: 97215 ggaacaccccagggatccca 97196
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>gb|AC011346.5| Homo sapiens chromosome 5 clone CTC-295J13, complete sequence
          Length = 110077

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   caaatgatgcatcttgaaga 177
             ||||||||||||||||||||
Sbjct: 58289 caaatgatgcatcttgaaga 58270
to top
>dbj|AK053719.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130302B09 product:hypothetical protein,
            full insert sequence
          Length = 2839

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2079 gatgagcttgagctcgtcct 2098
to top
>dbj|AK014463.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4121402D02 product:hypothetical
            Proline-rich region containing protein, full insert
            sequence
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gatgagcttgagctcgtcct 405
            ||||||||||||||||||||
Sbjct: 2409 gatgagcttgagctcgtcct 2428
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 461     cttccagtcctcctcctcct 480
               ||||||||||||||||||||
Sbjct: 4024858 cttccagtcctcctcctcct 4024839
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>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   acaggtgacaaatgatgcat 169
             ||||||||||||||||||||
Sbjct: 24709 acaggtgacaaatgatgcat 24690
to top
>dbj|AB178233.2| Ciona intestinalis Ci-PSL3 mRNA for presenilin-like protein 3,
            complete cds
          Length = 1696

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  caactacacactgcaacagg 154
            ||||||||||||||||||||
Sbjct: 1213 caactacacactgcaacagg 1194
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>dbj|AK173583.1| Ciona intestinalis cDNA, clone:cicl001g08, full insert sequence
          Length = 1660

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  caactacacactgcaacagg 154
            ||||||||||||||||||||
Sbjct: 1213 caactacacactgcaacagg 1194
to top
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A21
          Length = 170051

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   cttccagtcctcctcctcct 480
             ||||||||||||||||||||
Sbjct: 71524 cttccagtcctcctcctcct 71505
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>dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M07, full
           insert sequence
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 cttccagtcctcctcctcct 480
           ||||||||||||||||||||
Sbjct: 172 cttccagtcctcctcctcct 153
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>gb|AY105501.1| Zea mays PCO142408 mRNA sequence
          Length = 1374

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 cttccagtcctcctcctcct 480
           ||||||||||||||||||||
Sbjct: 153 cttccagtcctcctcctcct 134
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>emb|CR848167.2| Xenopus tropicalis finished cDNA, clone TGas127o03
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 508 cagtcctcctcctcctggca 527
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 424     cttcaacctggccgcagccgaggc 447
               |||||||||||||| |||||||||
Sbjct: 3290465 cttcaacctggccgaagccgaggc 3290488
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>dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB262G12, complete
             sequence
          Length = 126698

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   acaggtgacaaatgatgcat 169
             ||||||||||||||||||||
Sbjct: 44990 acaggtgacaaatgatgcat 44971
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>gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, complete sequence
          Length = 205150

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  ctgcaacaggtgacaaatga 164
            ||||||||||||||||||||
Sbjct: 6582 ctgcaacaggtgacaaatga 6601
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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     ttaaaaacgcattcacattc 66
              ||||||||||||||||||||
Sbjct: 327857 ttaaaaacgcattcacattc 327876
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>emb|AL590963.11| Mouse DNA sequence from clone RP23-395E10 on chromosome 11, complete
             sequence
          Length = 196724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   gatgagcttgagctcgtcct 405
             ||||||||||||||||||||
Sbjct: 52902 gatgagcttgagctcgtcct 52883
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>dbj|AB034702.1| Xenopus laevis Xotx5 mRNA, complete cds
          Length = 1310

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 cagtcctcctcctcctggca 484
           ||||||||||||||||||||
Sbjct: 553 cagtcctcctcctcctggca 572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,473,528
Number of Sequences: 3902068
Number of extensions: 5473528
Number of successful extensions: 123531
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123167
Number of HSP's gapped (non-prelim): 358
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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