ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1h16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 9e-74
2gb|AC090483.3|AC090483 Genomic sequence for Oryza sativa, Nippon... 190 4e-45
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 190 4e-45
5ref|NM_195850.1| Oryza sativa (japonica cultivar-group) hypothet... 168 1e-38
6gb|AC151665.26| Medicago truncatula clone mth2-7k4, complete seq... 60 1e-05
7gb|AC174354.6| Medicago truncatula clone mth2-8m12, complete seq... 60 1e-05
8gb|AC126781.22| Medicago truncatula clone mth2-12m15, complete s... 60 1e-05
9dbj|AK100636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
10dbj|AK066931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
11dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone... 56 2e-04
12dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone... 56 2e-04
13ref|NM_195843.1| Oryza sativa (japonica cultivar-group) hypothet... 44 0.59
14gb|AC161790.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
15dbj|AK072372.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
16ref|XM_580330.2| PREDICTED: Bos taurus similar to nadrin isoform... 42 2.3
17emb|AL445931.29| Human DNA sequence from clone RP11-374P20 on ch... 42 2.3
18gb|AC002323.1|AC002323 Genomic sequence from Human 9q34, complet... 42 2.3
19gb|AC000391.1|AC000391 Genomic sequence from Human 9q34, complet... 42 2.3
20gb|AF100675.2| Caenorhabditis elegans cosmid Y55H10A, complete s... 40 9.2
21gb|AY691179.1| Cirrhinus mrigala growth hormone receptor mRNA, c... 40 9.2
22gb|AY691178.1| Catla catla growth hormone receptor mRNA, complet... 40 9.2
23ref|XM_601023.2| PREDICTED: Bos taurus similar to aryl hydrocarb... 40 9.2
24ref|NM_144529.1| Mus musculus Rho GTPase activating protein 17 (... 40 9.2
25gb|BC003259.1| Mus musculus Rho GTPase activating protein 17, mR... 40 9.2
26gb|BC001241.1| Homo sapiens Rho GTPase activating protein 17, mR... 40 9.2
27ref|NM_001006634.1| Homo sapiens Rho GTPase activating protein 1... 40 9.2
28ref|NM_018054.4| Homo sapiens Rho GTPase activating protein 17 (... 40 9.2
29gb|BC085736.1| Rattus norvegicus Rho GTPase activating protein 1... 40 9.2
30gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosom... 40 9.2
31gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosom... 40 9.2
32gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complet... 40 9.2
33ref|NM_022244.2| Rattus norvegicus Rho GTPase activating protein... 40 9.2
34gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, com... 40 9.2
35emb|AL512424.14| Human DNA sequence from clone RP11-453E2 on chr... 40 9.2
36emb|AL392111.12| Human DNA sequence from clone RP11-487I5 on chr... 40 9.2
37gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, c... 40 9.2
38gb|AF173885.1| Homo sapiens MSTP110 (MST110) mRNA, complete cds 40 9.2
39gb|AF163257.1| Homo sapiens MSTP066 (MST066) mRNA, complete cds 40 9.2
40emb|AL161728.25| Human DNA sequence from clone RP11-342C23 on ch... 40 9.2
41gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome... 40 9.2
42dbj|AK094886.1| Homo sapiens cDNA FLJ37567 fis, clone BRCOC20021... 40 9.2
43emb|CR603587.1| full-length cDNA clone CS0DI022YF20 of Placenta ... 40 9.2
44emb|CR602276.1| full-length cDNA clone CS0DM012YH22 of Fetal liv... 40 9.2
45dbj|AK027567.1| Homo sapiens cDNA FLJ14661 fis, clone NT2RP20027... 40 9.2
46dbj|AK023281.1| Homo sapiens cDNA FLJ13219 fis, clone NT2RP40018... 40 9.2
47dbj|AK001170.1| Homo sapiens cDNA FLJ10308 fis, clone NT2RM2000260 40 9.2
48gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, comp... 40 9.2
49gb|AF113218.1| Homo sapiens MSTP038 mRNA, complete cds 40 9.2
50gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, com... 40 9.2
51dbj|AK149986.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.2
52dbj|AK147010.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 40 9.2
53gb|AF258580.1|AF258580 Homo sapiens PP4534 mRNA, complete cds 40 9.2
54dbj|AK152301.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.2
55dbj|AK152266.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.2
56dbj|AK036617.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 9.2
57dbj|AK036468.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 9.2
58dbj|AK046411.1| Mus musculus adult male corpora quadrigemina cDN... 40 9.2
59dbj|AK017483.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 9.2
60ref|XM_309518.2| Anopheles gambiae str. PEST ENSANGP00000012511 ... 40 9.2
61gb|BC080195.1| Homo sapiens Rho GTPase activating protein 17, mR... 40 9.2
62emb|AL833975.1|HSM805229 Homo sapiens mRNA; cDNA DKFZp564A1363 (... 40 9.2
63dbj|AB060557.1| Rattus norvegicus mRNA for Nadrin E2, complete cds 40 9.2
64dbj|AB060556.1| Rattus norvegicus mRNA for Nadrin E1, complete cds 40 9.2
65dbj|AB060554.1| Mus musculus mRNA for Nadrin2, complete cds 40 9.2
66dbj|AB060553.1| Mus musculus mRNA for Nadrin1, complete cds 40 9.2
67dbj|AB080637.1| Rattus norvegicus mRNA for Nadrin-102, complete cds 40 9.2
68dbj|AB042827.1| Rattus norvegicus mRNA for Nadrin, complete cds 40 9.2 
>dbj|AK101675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F11, full
            insert sequence
          Length = 2868

 Score =  285 bits (144), Expect = 9e-74
 Identities = 323/383 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  gcttcatgcaggctaccttctttccagcagatgttgaccgtcaccccgcctcgggccctc 350
            |||||||| ||||||||||| | ||| | ||||||||  ||||| |||||||||||| | 
Sbjct: 2466 gcttcatggaggctaccttcctcccacctgatgttgatggtcacaccgcctcgggccttg 2407

                                                                        
Query: 351  agacctttgacactgccgtggggccacttgttgcggggcagagcagggagcaggtacaga 410
            |||||||| ||||  || || |||||||| |  ||||| |  |||||||||| |||||  
Sbjct: 2406 agacctttcacacaaccttgaggccacttatcacggggtaaggcagggagcaagtacaag 2347

                                                                        
Query: 411  tcactcccggtgctctgcacaagcatttcgcacaatgcagctgggaatccgaaatttgca 470
            || |||||||||||||| || ||||||||  ||| |||||| |||||||| |||||||||
Sbjct: 2346 tcgctcccggtgctctgtaccagcatttctgacagtgcagcagggaatccaaaatttgca 2287

                                                                        
Query: 471  tcaatttggaatggtggatgcgccgtgaacaaattgctgtatagacctccttccttatca 530
            ||||||||||| ||||| || || ||||||| ||||| |||||| ||||||||||| || 
Sbjct: 2286 tcaatttggaaaggtgggtgtgctgtgaacagattgcagtataggcctccttccttttcg 2227

                                                                        
Query: 531  cgctcgtgattcggatctatcaaagtgattagctgcagaatcattttgtatgcatgctca 590
              ||| || || ||||||| ||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 2226 acctcatgttttggatctaccaaagtgatcagctgaagaatcattttatatgcatgctca 2167

                                                                        
Query: 591  ctgttgtgaagatgagcccacagggccatcttccatgaagtagaccacccanggccttta 650
            ||||| |||||||| ||||| |||||||||||||| ||||| ||||||||| | |||| |
Sbjct: 2166 ctgttatgaagatgggcccaaagggccatcttccaggaagtggaccacccaggaccttca 2107

                                   
Query: 651  tcacctcttttataaagagtatt 673
            |||||||||||||| ||| ||||
Sbjct: 2106 tcacctcttttatagagactatt 2084



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 144  gtacattctcacagtggacaggtctccaagcacttcaactccgagttgaacctgtaaact 203
            ||||||||||| || |  || |||| |||||||||||  |||  | ||||||||||||||
Sbjct: 2613 gtacattctcagagagcccaagtcttcaagcacttcagatccttgctgaacctgtaaact 2554

                
Query: 204  tgac 207
            ||||
Sbjct: 2553 tgac 2550
to top
>gb|AC090483.3|AC090483 Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0050M22, from chromosome 10, complete sequence
          Length = 145417

 Score =  190 bits (96), Expect = 4e-45
 Identities = 170/195 (87%)
 Strand = Plus / Plus

                                                                         
Query: 462   aaatttgcatcaatttggaatggtggatgcgccgtgaacaaattgctgtatagacctcct 521
             |||||||||||||||||||| ||||| || || ||||||| ||||| |||||| ||||||
Sbjct: 40222 aaatttgcatcaatttggaaaggtgggtgtgctgtgaacagattgcagtataggcctcct 40281

                                                                         
Query: 522   tccttatcacgctcgtgattcggatctatcaaagtgattagctgcagaatcattttgtat 581
             ||||| |||  ||| || || ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct: 40282 tccttttcaacctcatgttttggatctaccaaagtgatcagctgaagaatcattttatat 40341

                                                                         
Query: 582   gcatgctcactgttgtgaagatgagcccacagggccatcttccatgaagtagaccaccca 641
             |||||||||||||| |||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 40342 gcatgctcactgttatgaagatgggcccaaagggccatcttccaggaagtggaccaccca 40401

                            
Query: 642   nggcctttatcacct 656
              | |||| |||||||
Sbjct: 40402 ggaccttcatcacct 40416



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 138/169 (81%)
 Strand = Plus / Plus

                                                                         
Query: 291   gcttcatgcaggctaccttctttccagcagatgttgaccgtcaccccgcctcgggccctc 350
             |||||||| ||||||||||| | ||| | ||||||||  ||||| |||||||||||| | 
Sbjct: 39655 gcttcatggaggctaccttcctcccacctgatgttgatggtcacaccgcctcgggccttg 39714

                                                                         
Query: 351   agacctttgacactgccgtggggccacttgttgcggggcagagcagggagcaggtacaga 410
             |||||||| ||||  || || |||||||| |  ||||| |  |||||||||| |||||  
Sbjct: 39715 agacctttcacacaaccttgaggccacttatcacggggtaaggcagggagcaagtacaag 39774

                                                              
Query: 411   tcactcccggtgctctgcacaagcatttcgcacaatgcagctgggaatc 459
             || |||||||||||||| || ||||||||  ||| |||||| |||||||
Sbjct: 39775 tcgctcccggtgctctgtaccagcatttctgacagtgcagcagggaatc 39823



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 144   gtacattctcacagtggacaggtctccaagcacttcaactccgagttgaacctgtaaact 203
             ||||||||||| || |  || |||| |||||||||||  |||  | ||||||||||||||
Sbjct: 39508 gtacattctcagagagcccaagtcttcaagcacttcagatccttgctgaacctgtaaact 39567

                 
Query: 204   tgac 207
             ||||
Sbjct: 39568 tgac 39571
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  190 bits (96), Expect = 4e-45
 Identities = 170/195 (87%)
 Strand = Plus / Plus

                                                                           
Query: 462     aaatttgcatcaatttggaatggtggatgcgccgtgaacaaattgctgtatagacctcct 521
               |||||||||||||||||||| ||||| || || ||||||| ||||| |||||| ||||||
Sbjct: 9406738 aaatttgcatcaatttggaaaggtgggtgtgctgtgaacagattgcagtataggcctcct 9406797

                                                                           
Query: 522     tccttatcacgctcgtgattcggatctatcaaagtgattagctgcagaatcattttgtat 581
               ||||| |||  ||| || || ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct: 9406798 tccttttcaacctcatgttttggatctaccaaagtgatcagctgaagaatcattttatat 9406857

                                                                           
Query: 582     gcatgctcactgttgtgaagatgagcccacagggccatcttccatgaagtagaccaccca 641
               |||||||||||||| |||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 9406858 gcatgctcactgttatgaagatgggcccaaagggccatcttccaggaagtggaccaccca 9406917

                              
Query: 642     nggcctttatcacct 656
                | |||| |||||||
Sbjct: 9406918 ggaccttcatcacct 9406932



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 138/169 (81%)
 Strand = Plus / Plus

                                                                           
Query: 291     gcttcatgcaggctaccttctttccagcagatgttgaccgtcaccccgcctcgggccctc 350
               |||||||| ||||||||||| | ||| | ||||||||  ||||| |||||||||||| | 
Sbjct: 9406171 gcttcatggaggctaccttcctcccacctgatgttgatggtcacaccgcctcgggccttg 9406230

                                                                           
Query: 351     agacctttgacactgccgtggggccacttgttgcggggcagagcagggagcaggtacaga 410
               |||||||| ||||  || || |||||||| |  ||||| |  |||||||||| |||||  
Sbjct: 9406231 agacctttcacacaaccttgaggccacttatcacggggtaaggcagggagcaagtacaag 9406290

                                                                
Query: 411     tcactcccggtgctctgcacaagcatttcgcacaatgcagctgggaatc 459
               || |||||||||||||| || ||||||||  ||| |||||| |||||||
Sbjct: 9406291 tcgctcccggtgctctgtaccagcatttctgacagtgcagcagggaatc 9406339



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                           
Query: 144     gtacattctcacagtggacaggtctccaagcacttcaactccgagttgaacctgtaaact 203
               ||||||||||| || |  || |||| |||||||||||  |||  | ||||||||||||||
Sbjct: 9406024 gtacattctcagagagcccaagtcttcaagcacttcagatccttgctgaacctgtaaact 9406083

                   
Query: 204     tgac 207
               ||||
Sbjct: 9406084 tgac 9406087
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  190 bits (96), Expect = 4e-45
 Identities = 170/195 (87%)
 Strand = Plus / Plus

                                                                           
Query: 462     aaatttgcatcaatttggaatggtggatgcgccgtgaacaaattgctgtatagacctcct 521
               |||||||||||||||||||| ||||| || || ||||||| ||||| |||||| ||||||
Sbjct: 9412777 aaatttgcatcaatttggaaaggtgggtgtgctgtgaacagattgcagtataggcctcct 9412836

                                                                           
Query: 522     tccttatcacgctcgtgattcggatctatcaaagtgattagctgcagaatcattttgtat 581
               ||||| |||  ||| || || ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct: 9412837 tccttttcaacctcatgttttggatctaccaaagtgatcagctgaagaatcattttatat 9412896

                                                                           
Query: 582     gcatgctcactgttgtgaagatgagcccacagggccatcttccatgaagtagaccaccca 641
               |||||||||||||| |||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 9412897 gcatgctcactgttatgaagatgggcccaaagggccatcttccaggaagtggaccaccca 9412956

                              
Query: 642     nggcctttatcacct 656
                | |||| |||||||
Sbjct: 9412957 ggaccttcatcacct 9412971



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 138/169 (81%)
 Strand = Plus / Plus

                                                                           
Query: 291     gcttcatgcaggctaccttctttccagcagatgttgaccgtcaccccgcctcgggccctc 350
               |||||||| ||||||||||| | ||| | ||||||||  ||||| |||||||||||| | 
Sbjct: 9412210 gcttcatggaggctaccttcctcccacctgatgttgatggtcacaccgcctcgggccttg 9412269

                                                                           
Query: 351     agacctttgacactgccgtggggccacttgttgcggggcagagcagggagcaggtacaga 410
               |||||||| ||||  || || |||||||| |  ||||| |  |||||||||| |||||  
Sbjct: 9412270 agacctttcacacaaccttgaggccacttatcacggggtaaggcagggagcaagtacaag 9412329

                                                                
Query: 411     tcactcccggtgctctgcacaagcatttcgcacaatgcagctgggaatc 459
               || |||||||||||||| || ||||||||  ||| |||||| |||||||
Sbjct: 9412330 tcgctcccggtgctctgtaccagcatttctgacagtgcagcagggaatc 9412378



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                           
Query: 144     gtacattctcacagtggacaggtctccaagcacttcaactccgagttgaacctgtaaact 203
               ||||||||||| || |  || |||| |||||||||||  |||  | ||||||||||||||
Sbjct: 9412063 gtacattctcagagagcccaagtcttcaagcacttcagatccttgctgaacctgtaaact 9412122

                   
Query: 204     tgac 207
               ||||
Sbjct: 9412123 tgac 9412126
to top
>ref|NM_195850.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0050M22.6), mRNA
          Length = 2619

 Score =  168 bits (85), Expect = 1e-38
 Identities = 223/269 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  gcttcatgcaggctaccttctttccagcagatgttgaccgtcaccccgcctcgggccctc 350
            |||||||| ||||||||||| | ||| | ||||||||  ||||| |||||||||||| | 
Sbjct: 2480 gcttcatggaggctaccttcctcccacctgatgttgatggtcacaccgcctcgggccttg 2421

                                                                        
Query: 351  agacctttgacactgccgtggggccacttgttgcggggcagagcagggagcaggtacaga 410
            |||||||| ||||  || || |||||||| |  ||||| |  |||||||||| |||||  
Sbjct: 2420 agacctttcacacaaccttgaggccacttatcacggggtaaggcagggagcaagtacaag 2361

                                                                        
Query: 411  tcactcccggtgctctgcacaagcatttcgcacaatgcagctgggaatccgaaatttgca 470
            || |||||||||||||| || ||||||||  ||| |||||| |||||||| |||||||||
Sbjct: 2360 tcgctcccggtgctctgtaccagcatttctgacagtgcagcagggaatccaaaatttgca 2301

                                                                        
Query: 471  tcaatttggaatggtggatgcgccgtgaacaaattgctgtatagacctccttccttatca 530
            ||||||||||| ||||| || || ||||||| ||||| |||||| ||||||||||| |||
Sbjct: 2300 tcaatttggaaaggtgggtgtgctgtgaacagattgcagtataggcctccttccttttca 2241

                                         
Query: 531  cgctcgtgattcggatctatcaaagtgat 559
              ||| || || ||||||| |||||||||
Sbjct: 2240 acctcatgttttggatctaccaaagtgat 2212



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 592  tgttgtgaagatgagcccacagggccatcttccatgaagtagaccacccanggcctttat 651
            |||| |||||||| ||||| |||||||||||||| ||||| ||||||||| | |||| ||
Sbjct: 2208 tgttatgaagatgggcccaaagggccatcttccaggaagtggaccacccaggaccttcat 2149

                                  
Query: 652  cacctcttttataaagagtatt 673
            ||||||||||||| ||| ||||
Sbjct: 2148 cacctcttttatagagactatt 2127
to top
>gb|AC151665.26| Medicago truncatula clone mth2-7k4, complete sequence
          Length = 135880

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 579   tatgcatgctcactgttgtgaagatgagcccaca 612
             |||||||||||||||||||||||| |||||||||
Sbjct: 18450 tatgcatgctcactgttgtgaagacgagcccaca 18483
to top
>gb|AC174354.6| Medicago truncatula clone mth2-8m12, complete sequence
          Length = 122859

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 579  tatgcatgctcactgttgtgaagatgagcccaca 612
            |||||||||||||||||||||||| |||||||||
Sbjct: 9781 tatgcatgctcactgttgtgaagacgagcccaca 9814
to top
>gb|AC126781.22| Medicago truncatula clone mth2-12m15, complete sequence
          Length = 116119

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 579  tatgcatgctcactgttgtgaagatgagcccaca 612
            |||||||||||||||||||||||| |||||||||
Sbjct: 2811 tatgcatgctcactgttgtgaagacgagcccaca 2778
to top
>dbj|AK100636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110E05, full
            insert sequence
          Length = 2744

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 446  tgcagctgggaatccgaaatttgcatcaatttggaatggtgg 487
            |||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 2221 tgcagctgtgaatccaaaatttgcatcaatttggaagggtgg 2180
to top
>dbj|AK066931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091O15, full
            insert sequence
          Length = 2984

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 446  tgcagctgggaatccgaaatttgcatcaatttggaatggtgg 487
            |||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 2261 tgcagctgtgaatccaaaatttgcatcaatttggaagggtgg 2220
to top
>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327,
             complete sequence
          Length = 105384

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 579   tatgcatgctcactgttgtgaagatgagccca 610
             ||||||||||||||||||||||| ||||||||
Sbjct: 13236 tatgcatgctcactgttgtgaaggtgagccca 13267



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 306   ccttctttccagcagatgttgaccgtcac 334
             ||||||||||||||||||||||| |||||
Sbjct: 12332 ccttctttccagcagatgttgactgtcac 12360
to top
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200,
            complete sequence
          Length = 91393

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 579  tatgcatgctcactgttgtgaagatgagccca 610
            ||||||||||||||||||||||| ||||||||
Sbjct: 7376 tatgcatgctcactgttgtgaaggtgagccca 7345



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 306  ccttctttccagcagatgttgaccgtcac 334
            ||||||||||||||||||||||| |||||
Sbjct: 8280 ccttctttccagcagatgttgactgtcac 8252
to top
>ref|NM_195843.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0015I18.2), mRNA
          Length = 639

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 446 tgcagctgggaatccgaaatttgcatcaatttggaatggtgg 487
           ||||| || |||||| |||||||||||||| ||||| |||||
Sbjct: 174 tgcagttgtgaatccaaaatttgcatcaatctggaagggtgg 133
to top
>gb|AC161790.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0011F12,
              complete sequence
          Length = 122262

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 462    aaatttgcatcaatttggaatggtgg 487
              |||||||||||||||||||| |||||
Sbjct: 103516 aaatttgcatcaatttggaagggtgg 103541
to top
>dbj|AK072372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068F06, full
            insert sequence
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 462  aaatttgcatcaatttggaatggtgg 487
            |||||||||||||||||||| |||||
Sbjct: 1815 aaatttgcatcaatttggaagggtgg 1840
to top
>ref|XM_580330.2| PREDICTED: Bos taurus similar to nadrin isoform 1 (LOC504245), mRNA
          Length = 3848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  gctgcagaatcattttgtatg 582
            |||||||||||||||||||||
Sbjct: 3422 gctgcagaatcattttgtatg 3442
to top
>emb|AL445931.29| Human DNA sequence from clone RP11-374P20 on chromosome 9 Contains the 5'
              end of the VAV2 gene for vav 2 oncogene, a novel gene
              (FLJ35348), the 3' end of the BRD3 gene for bromodomain
              containing 3, a novel gene and five CpG islands, complete
              sequence
          Length = 175033

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 381    ttgcggggcagagcagggagc 401
              |||||||||||||||||||||
Sbjct: 168415 ttgcggggcagagcagggagc 168395
to top
>gb|AC002323.1|AC002323 Genomic sequence from Human 9q34, complete sequence
          Length = 32259

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 ttgcggggcagagcagggagc 401
           |||||||||||||||||||||
Sbjct: 693 ttgcggggcagagcagggagc 713
to top
>gb|AC000391.1|AC000391 Genomic sequence from Human 9q34, complete sequence
          Length = 26060

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 381  ttgcggggcagagcagggagc 401
            |||||||||||||||||||||
Sbjct: 8632 ttgcggggcagagcagggagc 8652
to top
>gb|AF100675.2| Caenorhabditis elegans cosmid Y55H10A, complete sequence
          Length = 24427

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 448   cagctgggaatccgaaatttgcat 471
             ||||||| ||||||||||||||||
Sbjct: 16667 cagctggaaatccgaaatttgcat 16644
to top
>gb|AY691179.1| Cirrhinus mrigala growth hormone receptor mRNA, complete cds
          Length = 2290

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 tcgcaacagattgtgcctttggac 127
           |||||||||||| |||||||||||
Sbjct: 233 tcgcaacagattttgcctttggac 256
to top
>gb|AY691178.1| Catla catla growth hormone receptor mRNA, complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 tcgcaacagattgtgcctttggac 127
           |||||||||||| |||||||||||
Sbjct: 236 tcgcaacagattttgcctttggac 259
to top
>ref|XM_601023.2| PREDICTED: Bos taurus similar to aryl hydrocarbon receptor 2
            (LOC522736), mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  ggggcagagcagggagcagg 404
            ||||||||||||||||||||
Sbjct: 1870 ggggcagagcagggagcagg 1889
to top
>ref|NM_144529.1| Mus musculus Rho GTPase activating protein 17 (Arhgap17), mRNA
          Length = 3394

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3100 gctgcagaatcattttgtat 3119
to top
>gb|BC003259.1| Mus musculus Rho GTPase activating protein 17, mRNA (cDNA clone
            MGC:6676 IMAGE:3500822), complete cds
          Length = 3146

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2856 gctgcagaatcattttgtat 2875
to top
>gb|BC001241.1| Homo sapiens Rho GTPase activating protein 17, mRNA (cDNA clone
            IMAGE:3463495), complete cds
          Length = 1319

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1035 gctgcagaatcattttgtat 1054
to top
>ref|NM_001006634.1| Homo sapiens Rho GTPase activating protein 17 (ARHGAP17), transcript
            variant 1, mRNA
          Length = 3480

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3217 gctgcagaatcattttgtat 3236
to top
>ref|NM_018054.4| Homo sapiens Rho GTPase activating protein 17 (ARHGAP17), transcript
            variant 2, mRNA
          Length = 3246

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2983 gctgcagaatcattttgtat 3002
to top
>gb|BC085736.1| Rattus norvegicus Rho GTPase activating protein 17, mRNA (cDNA clone
            MGC:93451 IMAGE:7130218), complete cds
          Length = 3341

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3114 gctgcagaatcattttgtat 3133
to top
>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence
          Length = 180794

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 584    atgctcactgttgtgaagat 603
              ||||||||||||||||||||
Sbjct: 171489 atgctcactgttgtgaagat 171470
to top
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence
          Length = 191330

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    gctgcagaatcattttgtat 581
              ||||||||||||||||||||
Sbjct: 172188 gctgcagaatcattttgtat 172207
to top
>gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complete sequence
          Length = 178471

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 568  gaatcattttgtatgcatgc 587
            ||||||||||||||||||||
Sbjct: 8575 gaatcattttgtatgcatgc 8594
to top
>ref|NM_022244.2| Rattus norvegicus Rho GTPase activating protein 17 (Arhgap17), mRNA
          Length = 3144

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2879 gctgcagaatcattttgtat 2898
to top
>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence
          Length = 199717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   gctgcagaatcattttgtat 581
             ||||||||||||||||||||
Sbjct: 49284 gctgcagaatcattttgtat 49303
to top
>emb|AL512424.14| Human DNA sequence from clone RP11-453E2 on chromosome 10 Contains the 5'
              end of the SLIT1 gene for slit homolog 1 (Drosophila), a
              novel gene and a CpG island, complete sequence
          Length = 172510

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    gagcagggagcaggtacaga 410
              ||||||||||||||||||||
Sbjct: 153613 gagcagggagcaggtacaga 153632
to top
>emb|AL392111.12| Human DNA sequence from clone RP11-487I5 on chromosome 10 Contains
            the DUSP13 gene for dual specificity phosphatase 13
            (BEDP, TMDP, FLJ32450), the gene for a novel protein
            (FLJ25082), the 5' end fo the VDAC2 gene for
            voltage-dependent anion channel 2, a peptidylprolyl
            isomerase A (cyclophilin A)(PPIA)(CYPA, CYPH) pseudogene,
            a ribosomal protein S26 (RPS26) pseudogene and two CpG
            islands, complete sequence
          Length = 159365

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 512  tagacctccttccttatcac 531
            ||||||||||||||||||||
Sbjct: 3091 tagacctccttccttatcac 3072
to top
>gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, complete sequence
          Length = 105813

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   atgctcactgttgtgaagat 603
             ||||||||||||||||||||
Sbjct: 95075 atgctcactgttgtgaagat 95056
to top
>gb|AF173885.1| Homo sapiens MSTP110 (MST110) mRNA, complete cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1007 gctgcagaatcattttgtat 1026
to top
>gb|AF163257.1| Homo sapiens MSTP066 (MST066) mRNA, complete cds
          Length = 1296

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1011 gctgcagaatcattttgtat 1030
to top
>emb|AL161728.25| Human DNA sequence from clone RP11-342C23 on chromosome 9 Contains the
             FBP1 gene for Fructose-1,6-bisphosphatase 1, a novel gene,
             the FBP2 gene for Fructose-1,6-bisphosphatase 2, a  gene
             for a putative novel protein and one CpG island, complete
             sequence
          Length = 170532

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   gtgcctttggactgcagaac 135
             ||||||||||||||||||||
Sbjct: 26274 gtgcctttggactgcagaac 26255
to top
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence
          Length = 242759

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 584    atgctcactgttgtgaagat 603
              ||||||||||||||||||||
Sbjct: 183088 atgctcactgttgtgaagat 183107
to top
>dbj|AK094886.1| Homo sapiens cDNA FLJ37567 fis, clone BRCOC2002155, moderately
            similar to Rattus norvegicus mRNA for Nadrin
          Length = 2849

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2588 gctgcagaatcattttgtat 2607
to top
>emb|CR603587.1| full-length cDNA clone CS0DI022YF20 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 734

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 562 gctgcagaatcattttgtat 581
           ||||||||||||||||||||
Sbjct: 502 gctgcagaatcattttgtat 521
to top
>emb|CR602276.1| full-length cDNA clone CS0DM012YH22 of Fetal liver of Homo sapiens
           (human)
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 562 gctgcagaatcattttgtat 581
           ||||||||||||||||||||
Sbjct: 897 gctgcagaatcattttgtat 916
to top
>dbj|AK027567.1| Homo sapiens cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
            SH3-BINDING PROTEIN 3BP-1
          Length = 3219

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2960 gctgcagaatcattttgtat 2979
to top
>dbj|AK023281.1| Homo sapiens cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
            SH3-BINDING PROTEIN 3BP-1
          Length = 2918

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2659 gctgcagaatcattttgtat 2678
to top
>dbj|AK001170.1| Homo sapiens cDNA FLJ10308 fis, clone NT2RM2000260
          Length = 1465

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1213 gctgcagaatcattttgtat 1232
to top
>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence
          Length = 159519

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    tagacctccttccttatcac 531
              ||||||||||||||||||||
Sbjct: 158604 tagacctccttccttatcac 158585
to top
>gb|AF113218.1| Homo sapiens MSTP038 mRNA, complete cds
          Length = 735

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 562 gctgcagaatcattttgtat 581
           ||||||||||||||||||||
Sbjct: 456 gctgcagaatcattttgtat 475
to top
>gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, complete sequence
          Length = 219013

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   gctgcagaatcattttgtat 581
             ||||||||||||||||||||
Sbjct: 18021 gctgcagaatcattttgtat 18040
to top
>dbj|AK149986.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530113F12 product:Rho GTPase activating
            protein 17, full insert sequence
          Length = 3039

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2889 gctgcagaatcattttgtat 2908
to top
>dbj|AK147010.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920087G14 product:Rho GTPase activating
            protein 17, full insert sequence
          Length = 3332

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3073 gctgcagaatcattttgtat 3092
to top
>gb|AF258580.1|AF258580 Homo sapiens PP4534 mRNA, complete cds
          Length = 1683

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1353 gctgcagaatcattttgtat 1372
to top
>dbj|AK152301.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830059F06 product:Nadrin1 homolog [Mus
            musculus], full insert sequence
          Length = 3373

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3114 gctgcagaatcattttgtat 3133
to top
>dbj|AK152266.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830057M17 product:Rho GTPase activating
            protein 17, full insert sequence
          Length = 3112

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2853 gctgcagaatcattttgtat 2872
to top
>dbj|AK036617.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830141P14 product:NADRIN homolog [Rattus
            norvegicus], full insert sequence
          Length = 3169

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2852 gctgcagaatcattttgtat 2871
to top
>dbj|AK036468.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830113J03 product:NADRIN homolog [Rattus
            norvegicus], full insert sequence
          Length = 3169

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2852 gctgcagaatcattttgtat 2871
to top
>dbj|AK046411.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230380O05 product:NADRIN homolog
            [Rattus norvegicus], full insert sequence
          Length = 3313

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3059 gctgcagaatcattttgtat 3078
to top
>dbj|AK017483.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730403H17 product:Rho GTPase
            activating protein 17, full insert sequence
          Length = 1526

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1267 gctgcagaatcattttgtat 1286
to top
>ref|XM_309518.2| Anopheles gambiae str. PEST ENSANGP00000012511
           (ENSANGG00000010022), partial mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 acattctcacagtggacagg 165
           ||||||||||||||||||||
Sbjct: 125 acattctcacagtggacagg 144
to top
>gb|BC080195.1| Homo sapiens Rho GTPase activating protein 17, mRNA (cDNA clone
            MGC:87805 IMAGE:6172310), complete cds
          Length = 3472

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3194 gctgcagaatcattttgtat 3213
to top
>emb|AL833975.1|HSM805229 Homo sapiens mRNA; cDNA DKFZp564A1363 (from clone DKFZp564A1363)
          Length = 2232

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 1959 gctgcagaatcattttgtat 1978
to top
>dbj|AB060557.1| Rattus norvegicus mRNA for Nadrin E2, complete cds
          Length = 3376

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3111 gctgcagaatcattttgtat 3130
to top
>dbj|AB060556.1| Rattus norvegicus mRNA for Nadrin E1, complete cds
          Length = 3424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3159 gctgcagaatcattttgtat 3178
to top
>dbj|AB060554.1| Mus musculus mRNA for Nadrin2, complete cds
          Length = 3177

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2866 gctgcagaatcattttgtat 2885
to top
>dbj|AB060553.1| Mus musculus mRNA for Nadrin1, complete cds
          Length = 3411

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 3100 gctgcagaatcattttgtat 3119
to top
>dbj|AB080637.1| Rattus norvegicus mRNA for Nadrin-102, complete cds
          Length = 3190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2925 gctgcagaatcattttgtat 2944
to top
>dbj|AB042827.1| Rattus norvegicus mRNA for Nadrin, complete cds
          Length = 3142

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gctgcagaatcattttgtat 581
            ||||||||||||||||||||
Sbjct: 2877 gctgcagaatcattttgtat 2896


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,027,511
Number of Sequences: 3902068
Number of extensions: 5027511
Number of successful extensions: 85341
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85171
Number of HSP's gapped (non-prelim): 169
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top