ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27n07 |
|---|---|
| Clone Library Name | barley_pub |
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 65.5 bits (158), Expect = 3e-11 Identities = 34/73 (46%), Positives = 48/73 (65%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 A+VGNLS++++E DL DFF + SIR ID T SRGF +V+FE ++L A+ ++ Sbjct: 96 AHVGNLSFDLTENDLGDFFGEG-VTSIRLVIDPLTERSRGFGYVEFETADTLSAALALSG 154 Query: 201 SXLRGRPVKIAYA 163 L GRPV+I A Sbjct: 155 EDLMGRPVRITVA 167
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 54.7 bits (130), Expect = 5e-08 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 AYVGNL +N + D+ FK I S+R DK T +GFC+V+F+ +SL++A+ + Sbjct: 43 AYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDG 102 Query: 201 SXLRGRPVKIAYA 163 + L R +++ A Sbjct: 103 ALLGDRSLRVDIA 115
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 54.7 bits (130), Expect = 5e-08 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 AYVGNL +N + D+ FK I S+R DK T +GFC+V+F+ +SL++A+ + Sbjct: 43 AYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDG 102 Query: 201 SXLRGRPVKIAYA 163 + L R +++ A Sbjct: 103 ALLGDRSLRVDIA 115
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 53.1 bits (126), Expect = 2e-07 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG LSW+ S+KDL+D+F K + +D TG SRGF + F+ S+EK + + Sbjct: 78 FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKE 137 Query: 201 SXLRGRPV 178 L GR + Sbjct: 138 HRLDGRVI 145
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 52.8 bits (125), Expect = 2e-07 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG LSW+ S+KDL+D+F K + +D TG SRGF + F+ S+EK + + Sbjct: 71 FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKE 130 Query: 201 SXLRGRPV 178 L GR + Sbjct: 131 HRLDGRVI 138
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG LSW +EK+LRD F K I SI D +TG SRGF + F E+++K ++ Sbjct: 59 FVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADE 118 Query: 201 SXLRGRPV 178 + + V Sbjct: 119 HIINSKKV 126 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L+ IS+++++ +F + I + DK+ +GFC + F+ + + + + Sbjct: 139 FVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPK 198 Query: 201 SXLRGRPVKIAYA 163 + G+ V + A Sbjct: 199 QKIAGKEVDVKRA 211
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW+ ++KDL+D+F K + +D TG SRGF V F+ ES++K + + Sbjct: 100 FIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKE 159 Query: 201 SXLRGRPV 178 L G+ + Sbjct: 160 HKLNGKVI 167
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW+ ++KDL+D+F K + +D TG SRGF V F+ ES++K + + Sbjct: 100 FIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKE 159 Query: 201 SXLRGRPV 178 L G+ + Sbjct: 160 HKLNGKVI 167
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VGNLS+N +E DL F I SIR D ++G +GF +V F +S +K V MN Sbjct: 369 FVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEMNG 428 Query: 201 SXLRGRPVKIAYA 163 + GRP ++ ++ Sbjct: 429 HFIAGRPCRLDFS 441 Score = 45.1 bits (105), Expect = 4e-05 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMN- 205 +VG LSWN+ ++ L ++F + I R +D ++G S+G+ +VDFE E+ + AV N Sbjct: 266 FVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANG 325 Query: 204 QSXLRGRPVKI 172 + GR V + Sbjct: 326 TKEIDGRMVNL 336
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW+ ++KDL+D+F K + +D TG SRGF V F+ ES++K + + Sbjct: 98 FIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKE 157 Query: 201 SXLRGRPV 178 L G+ + Sbjct: 158 HKLNGKVI 165
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSS-RIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 YV NLSW ++ + LRD F S + D+ +G SRGF + F E++ A+ MN Sbjct: 220 YVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMN 279 Query: 204 QSXLRGRPVKIAYA 163 + L GRP+++ A Sbjct: 280 EVELEGRPLRLNVA 293
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 49.7 bits (117), Expect = 2e-06 Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDS-RGFCHVDFEXXESLEKAVGMN 205 A++GNL ++++E ++DFF+ I+++R + D +GF + +FE +SL A+ +N Sbjct: 98 AFLGNLPYDVTEDSIKDFFRGLNISAVRLPREPSNPDRLKGFGYAEFEDLDSLLSALSLN 157 Query: 204 QSXLRGRPVKIAYA 163 + L R +++ A Sbjct: 158 EESLGNRRIRVDVA 171
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 49.7 bits (117), Expect = 2e-06 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L + E+ +RD+F+ I I IDK TG RGF V+F+ + ++K V Q Sbjct: 125 FVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQ 184 Query: 201 SXLRGRPVKIAYAI 160 L G+ V + A+ Sbjct: 185 HQLNGKMVDVKKAL 198
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNLSW + + L + F + ++ R D+ +G S+GF V + ++KA+ +N Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319 Query: 204 QSXLRGRPVKIAYA 163 + L GR ++++ A Sbjct: 320 GADLDGRQIRVSEA 333 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSS-RIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGNLS+N+ L F+S+ + + DK TG SRGF V +E A N Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161 Query: 204 QSXLRGRPVKI 172 GRP+++ Sbjct: 162 GYEFEGRPLRV 172
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 47.4 bits (111), Expect = 9e-06 Identities = 20/74 (27%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDS-RGFCHVDFEXXESLEKAVGMN 205 A++GNL ++++E+ +++FF+ I+++R + + +GF + +FE +SL A+ +N Sbjct: 98 AFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLN 157 Query: 204 QSXLRGRPVKIAYA 163 + L R +++ A Sbjct: 158 EESLGNRRIRVDVA 171
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 47.4 bits (111), Expect = 9e-06 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFE----XXESLEKAVG 211 V LS +E+DLR+ F + ++ + D+RTG SRGF V FE E++E+A G Sbjct: 121 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 180 Query: 210 MNQSXLRGRPVKIAYAIINRA 148 M L GR +++ Y+I RA Sbjct: 181 ME---LDGRRIRVDYSITKRA 198
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 47.4 bits (111), Expect = 9e-06 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFE----XXESLEKAVG 211 V LS +E+DLR+ F + ++ + D+RTG SRGF V FE E++E+A G Sbjct: 123 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 182 Query: 210 MNQSXLRGRPVKIAYAIINRA 148 M L GR +++ Y+I RA Sbjct: 183 ME---LDGRRIRVDYSITKRA 200
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E DLRD+FK + S +DK T RGF V+F+ + ++K Sbjct: 111 FVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRN 170 Query: 201 SXLRGRPVKIAYAI 160 +RG+ + + A+ Sbjct: 171 HQIRGKHIDVKKAL 184
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 46.6 bits (109), Expect = 1e-05 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L N E+ LR++F + + S++ DK TG RGF V+F+ ++++KA+ Q Sbjct: 126 FVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQ 185 Query: 201 SXLRGRPVKIAYAIIN 154 ++ V + +I N Sbjct: 186 HAIKYVHVDVKKSIYN 201
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 YVGN+ + + ++L F + + DK +G +GF +++F ES+ ++ +++ Sbjct: 170 YVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 229 Query: 201 SXLRGRPVKIAYAIINR 151 S RGR +K+ NR Sbjct: 230 SLFRGRQIKVIPKRTNR 246
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 YVGN+ + + ++L F + + DK +G +GF +++F ES+ ++ +++ Sbjct: 174 YVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 233 Query: 201 SXLRGRPVKIAYAIINR 151 S RGR +K+ NR Sbjct: 234 SLFRGRQIKVIPKRTNR 250
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 YVGN+ + + ++L F + + DK +G +GF +++F ES+ ++ +++ Sbjct: 174 YVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 233 Query: 201 SXLRGRPVKIAYAIINR 151 S RGR +K+ NR Sbjct: 234 SLFRGRQIKVIPKRTNR 250
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNLSW + + L F + ++ R D+ +G S+GF V ++ + ++ A+ ++ Sbjct: 207 YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 266 Query: 204 QSXLRGRPVKIAYA 163 + L GR ++++ A Sbjct: 267 GADLDGRQIRVSEA 280
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VGN++ +++ + + D FK +I I D+ TG +G+ +++FE EKA+ +N Sbjct: 67 FVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNG 126 Query: 201 SXLRGRPVKIA 169 L+G+ + ++ Sbjct: 127 GELKGKKIAVS 137
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 YVGN+ ++++ ++L+ F S + + DK TG +GF +++F + A+ +N Sbjct: 58 YVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNG 117 Query: 201 SXLRGRPVKI 172 S L RP+K+ Sbjct: 118 SMLHERPLKV 127
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNLSW + + L++ F + + + D+ +G SRGF V + + + A+ +N Sbjct: 211 YVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLN 270 Query: 204 QSXLRGRPVKIAYA 163 L GR ++++ A Sbjct: 271 GIDLDGRSIRVSAA 284
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNLSW + + L++ F + + + D+ +G SRGF V + + + A+ +N Sbjct: 210 YVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLN 269 Query: 204 QSXLRGRPVKIAYA 163 L GR ++++ A Sbjct: 270 GVDLDGRSIRVSAA 283
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNL W++ L F + ++ R D+ TG SRGF V + L +A+ ++ Sbjct: 247 YVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALD 306 Query: 204 QSXLRGRPVKIAYA 163 L GR +++ A Sbjct: 307 GQNLEGRAIRVNVA 320
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 43.9 bits (102), Expect = 9e-05 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 YVG L +++E L + F S +ASIR D T S G+ +V+F E EKA+ +N Sbjct: 83 YVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELN 142 Query: 204 QSXLRGRPVKIAYA 163 + ++GRP +I ++ Sbjct: 143 YTLIKGRPCRIMWS 156 Score = 34.3 bits (77), Expect = 0.075 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++ NL + ++ L+ +F I S + D++ G S+GF V + E KAV MN Sbjct: 367 FIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVTEMN 425 Query: 204 QSXLRGRPVKIAYA 163 Q L G+P+ +A A Sbjct: 426 QRMLAGKPLYVALA 439
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQS 199 ++GNL+ N S +L+ + A+D RTG +R F +VDFE E LEKA+ + Sbjct: 313 FIGNLNPNKSVAELKVAISELFAKNDLAAVDVRTGTNRKFGYVDFESAEDLEKALELTGL 372 Query: 198 XLRGRPVKI 172 + G +K+ Sbjct: 373 KVFGNEIKL 381 Score = 36.2 bits (82), Expect = 0.020 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F+ S A R D+ TG S+GF VDF E + A M Sbjct: 577 FVKGLSEDTTEETLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 634 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 635 GEIDGNKVTLDWA 647 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -1 Query: 369 NLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ-SXL 193 NLS+NI+E +L++ F+ + + + + G S+G +++F+ EK + Q + + Sbjct: 402 NLSFNITEDELKEVFEDA----VEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEI 457 Query: 192 RGRPVKIAY 166 GR V + Y Sbjct: 458 DGRSVSLYY 466
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNL W++ L F + ++ S R D+ TG SRGF V + A+ ++ Sbjct: 152 YVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALD 211 Query: 204 QSXLRGRPVKIAYA 163 L GR V++ A Sbjct: 212 GQTLDGRAVRVNVA 225 Score = 34.7 bits (78), Expect = 0.057 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAVG-MN 205 +VGNL +++ + L F ++ + I I R D SRGF V E EKAV +N Sbjct: 58 FVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLN 117 Query: 204 QSXLRGRPVKI 172 + GR + + Sbjct: 118 GYDMDGRQLTV 128
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G L+W+ +E +LR++F K + ++ D TG SRGF + FE S+++ V Q Sbjct: 162 FIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV-KTQ 220 Query: 201 SXLRGRPVKIAYAI 160 L G+ + AI Sbjct: 221 HILDGKVIDPKRAI 234 Score = 35.8 bits (81), Expect = 0.026 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + ++ K+ +FF I + +DK TG SRGF V ++ +++++ Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKF 305 Query: 201 SXLRGRPVKIAYA 163 + R ++I A Sbjct: 306 IDFKDRKIEIKRA 318
>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110) Length = 963 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Frame = -1 Query: 378 YVGNLSWNISEKD--LRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 +V NL +++ E D LR F++ + IR R GD RG+C+V+F+ +S +A+ M Sbjct: 707 FVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSNR-GDFRGYCYVEFKEEKSALQALEM 765 Query: 207 NQSXLRGRPVKIA 169 ++ + GRP+ ++ Sbjct: 766 DRKSVEGRPMFVS 778
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNL+W + + L F + ++ + D+ +G SRGF V + E + A+ ++ Sbjct: 191 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 250 Query: 204 QSXLRGRPVKIAYA 163 L GR ++++ A Sbjct: 251 GVDLNGRAIRVSPA 264
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNL+W + + L F + ++ + D+ +G SRGF V + E + A+ ++ Sbjct: 197 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 256 Query: 204 QSXLRGRPVKIAYA 163 L GR ++++ A Sbjct: 257 GVDLNGRAIRVSPA 270
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLR----DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG 211 +VGNL++N S +L+ D F + +A +D R G +R F +VDFE E LEKA+ Sbjct: 311 FVGNLNFNKSAPELKTGISDVFAKNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALE 366 Query: 210 MNQSXLRGRPVKI 172 + + G +K+ Sbjct: 367 LTGLKVFGNEIKL 379 Score = 35.4 bits (80), Expect = 0.034 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F S A R D+ TG S+GF VDF E + A M Sbjct: 576 FVKGLSEDTTEETLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 633 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 634 GEIDGNKVTLDWA 646
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLR----DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG 211 +VGNL++N S +L+ D F + +A +D R G +R F +VDFE E LEKA+ Sbjct: 310 FVGNLNFNKSAPELKTGISDVFAKNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALE 365 Query: 210 MNQSXLRGRPVKI 172 + + G +K+ Sbjct: 366 LTGLKVFGNEIKL 378 Score = 35.4 bits (80), Expect = 0.034 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F S A R D+ TG S+GF VDF E + A M Sbjct: 575 FVKGLSEDTTEETLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 632 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 633 GEIDGNKVTLDWA 645
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGN+ W I + L F + ++ S R D+ TG SRGF V + A+ ++ Sbjct: 233 YVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLD 292 Query: 204 QSXLRGRPVKIAYA 163 L GR +++ A Sbjct: 293 GQSLDGRTIRVNVA 306 Score = 37.0 bits (84), Expect = 0.012 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKR-TGDSRGFCHVDFEXXESLEKAVGM-N 205 +VGNL +++ + L F+ + + I I R T SRGF V E EKAV M N Sbjct: 139 FVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 198 Query: 204 QSXLRGR 184 + + GR Sbjct: 199 RYDVNGR 205
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLR----DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG 211 +VGNL++N S +L+ D F + +A +D R G +R F +VDFE E LEKA+ Sbjct: 309 FVGNLNFNKSAPELKTGISDVFAKNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALE 364 Query: 210 MNQSXLRGRPVKI 172 + + G +K+ Sbjct: 365 LTGLKVFGNEIKL 377 Score = 35.4 bits (80), Expect = 0.034 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F S A R D+ TG S+GF VDF E + A M Sbjct: 574 FVKGLSEDTTEETLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 631 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 632 GEIDGNKVTLDWA 644
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++ N+S+ SE+D R F + + AID RTG S+GF +V F E +A ++ Sbjct: 313 FIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLD 372 Query: 204 QSXLRGRPVKI 172 + +GR + I Sbjct: 373 KQIFQGRLLHI 383 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = -1 Query: 351 SEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MNQSXLRGRPV 178 +E+ LR+FF K + ++ + KR G+SR F + ++ ++ E+AV N+S + + Sbjct: 14 TEEKLREFFSKQGDVTDVKL-MKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARI 72 Query: 177 KIAYA 163 ++ +A Sbjct: 73 EVEFA 77
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGN+ W+I + L F + ++ S R D+ +G SRGF V + +A+ ++ Sbjct: 194 YVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLD 253 Query: 204 QSXLRGRPVKI 172 L GR +++ Sbjct: 254 GQTLDGRTIRV 264 Score = 36.2 bits (82), Expect = 0.020 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAVGM-N 205 +VGNL ++I + L F+ + + I I R D SRGF V E +KAV + + Sbjct: 100 FVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYS 159 Query: 204 QSXLRGR 184 Q L GR Sbjct: 160 QYDLNGR 166
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQS 199 ++GNL+ N S +L+ + +D RTG +R F +VDFE E LEKA+ + Sbjct: 310 FIGNLNPNKSVAELKVAISEPFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGL 369 Query: 198 XLRGRPVKI 172 + G +K+ Sbjct: 370 KVFGNEIKL 378 Score = 36.2 bits (82), Expect = 0.020 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F+ S A R D+ TG S+GF VDF E + A M Sbjct: 574 FVKGLSEDTTEETLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 631 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 632 GEIDGNKVTLDWA 644 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -1 Query: 369 NLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ-SXL 193 NLS+NI+E +L++ F+ + + + + G S+G +++F+ EK + Q + + Sbjct: 399 NLSFNITEDELKEVFEDA----LEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEI 454 Query: 192 RGRPVKIAY 166 GR V + Y Sbjct: 455 DGRSVSLYY 463
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VG L + ++E D+ F I +I DK+TG S+GFC + +E S AV N Sbjct: 39 FVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFN 98 Query: 204 QSXLRGRPVKIAYAIINRA 148 ++GR +++ + RA Sbjct: 99 GIKIKGRTIRVDHVSNYRA 117
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQS 199 ++GNL+ N S +L+ + +D RTG +R F +VDFE E LEKA+ + Sbjct: 311 FIGNLNPNKSVNELKFAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGL 370 Query: 198 XLRGRPVKI 172 + G +K+ Sbjct: 371 KVFGNEIKL 379 Score = 36.2 bits (82), Expect = 0.020 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F+ S A R D+ TG S+GF VDF E + A M Sbjct: 571 FVKGLSEDTTEETLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMED 628 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 629 GEIDGNKVTLDWA 641 Score = 34.7 bits (78), Expect = 0.057 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -1 Query: 369 NLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ-SXL 193 NLS+NI+E +L++ F+ + + + + G S+G +++F+ EK + Q + + Sbjct: 400 NLSFNITEDELKEVFEDA----MEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEI 455 Query: 192 RGRPVKIAY 166 GR V + Y Sbjct: 456 DGRSVSLYY 464
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 ++G LSW + LRD F + + +D+ TG SRGF V+F + A+ M+ Sbjct: 38 FIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMD 97 Query: 204 QSXLRGRPVKI 172 L GR +++ Sbjct: 98 GKELNGRHIRV 108
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E +LRD+F K +I +I D+++G RGF V F+ ++++K V Sbjct: 129 FVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKY 188 Query: 201 SXLRGRPVKIAYAI 160 + G ++ A+ Sbjct: 189 HTINGHNCEVKKAL 202
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E +LRD+F K +I +I D+++G RGF V F+ ++++K V Sbjct: 129 FVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKY 188 Query: 201 SXLRGRPVKIAYAI 160 + G ++ A+ Sbjct: 189 HTINGHNCEVKKAL 202
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E +LRD+F K +I +I D+++G RGF V F+ ++++K V Sbjct: 129 FVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKY 188 Query: 201 SXLRGRPVKIAYAI 160 + G ++ A+ Sbjct: 189 HTINGHNCEVKKAL 202
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 42.0 bits (97), Expect = 4e-04 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVG L+ + +K L F I I+ +D T RGF V+FE E A+ MN Sbjct: 9 YVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 68 Query: 204 QSXLRGRPVKIAYA 163 +S L GR +++ A Sbjct: 69 ESELFGRTIRVNLA 82
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 42.0 bits (97), Expect = 4e-04 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVG L+ + +K L F I I+ +D T RGF V+FE E A+ MN Sbjct: 9 YVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 68 Query: 204 QSXLRGRPVKIAYA 163 +S L GR +++ A Sbjct: 69 ESELFGRTIRVNLA 82
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VG LSW+I ++ L+ F+ + R ++ T SRG+ +VDFE EKA+ M Sbjct: 171 FVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQ 230 Query: 204 QSXLRGRPV 178 + GRP+ Sbjct: 231 GKEIDGRPI 239 Score = 37.0 bits (84), Expect = 0.012 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++GNLS+N + + F K + S+R T +GF +V F E +KA+ + Sbjct: 270 FLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQ 329 Query: 204 QSXLRGRPVKIAYA 163 + RPV++ ++ Sbjct: 330 GEYIDNRPVRLDFS 343
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E LR++F+ +I SI DK++G RGF V F+ + ++K V Sbjct: 103 FVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKY 162 Query: 201 SXLRGRPVKIAYAI 160 + G ++ A+ Sbjct: 163 HTINGHNAEVRKAL 176
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 41.2 bits (95), Expect = 6e-04 Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Frame = -1 Query: 378 YVGNLSWNISEKD--LRDFFK-SSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 +V NL ++I E + LR F+ + IR R GD RG+C+V+F +S ++A+ + Sbjct: 707 FVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSNR-GDFRGYCYVEFGEEKSAQQALEL 765 Query: 207 NQSXLRGRPVKIA 169 ++ + GRP+ ++ Sbjct: 766 DRKIVEGRPMFVS 778
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 41.2 bits (95), Expect = 6e-04 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VG L+W S + L + F S I + D+ TG SRGF V F S+ A+ MN Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 204 QSXLRGRPVKIAYA 163 L GR + + A Sbjct: 71 GKELDGRNITVNQA 84
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 41.2 bits (95), Expect = 6e-04 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFK-SSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 YVG+L +++E L + F + I SIR D T S G+ +V+F+ E+A+ MN Sbjct: 14 YVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN 73 Query: 204 QSXLRGRPVKIAYA 163 ++GRPV+I ++ Sbjct: 74 FDVIKGRPVRIMWS 87 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N +++++ L++ F K S++ D G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 + G+ + + A Sbjct: 253 GKDMNGKSMFVGRA 266
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VG+L+ N+ ++ LR+ FK S D +TG SRG+ V F + + A+ M Sbjct: 164 FVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQ 223 Query: 204 QSXLRGRPVKIAYA 163 L GRP++I +A Sbjct: 224 GQDLNGRPLRINWA 237
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 41.2 bits (95), Expect = 6e-04 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G L N++E DLR FF + ++ + D+ SRGF + FE S+E Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERY 158 Query: 201 SXLRGRPVKIAYA 163 L G+ V+I A Sbjct: 159 INLNGKQVEIKKA 171 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG LSW ++++L R F + I + +G SRGF V F ++ + Sbjct: 10 FVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGP 69 Query: 201 SXLRGRPV 178 L GR + Sbjct: 70 HTLDGRTI 77
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 40.8 bits (94), Expect = 8e-04 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++G L + ++E D+ F I +I DK+TG S+GFC + +E S AV N Sbjct: 39 FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 98 Query: 204 QSXLRGRPVKIAYAIINRA 148 ++GR +++ + RA Sbjct: 99 GIKIKGRTIRVDHVSNYRA 117
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GM 208 ++GNL I EK L D F + + + + D TG+S+G+ ++F ++ + A+ M Sbjct: 103 FIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAM 162 Query: 207 NQSXLRGRPVKIAYA 163 N L RP+ ++YA Sbjct: 163 NGQYLCNRPITVSYA 177
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 40.8 bits (94), Expect = 8e-04 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW S LRD+F K I D T SRGF V F S++K +G Sbjct: 24 FIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 83 Query: 201 SXLRGRPVKIAYAIINRA 148 L + + A RA Sbjct: 84 HELDSKTIDPKVAFPRRA 101
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 40.8 bits (94), Expect = 8e-04 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW S LRD+F K I D T SRGF V F S++K +G Sbjct: 24 FIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 83 Query: 201 SXLRGRPVKIAYAIINRA 148 L + + A RA Sbjct: 84 HELDSKTIDPKVAFPRRA 101
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + N E +LR++FK + + D RGF + FE +S+++AV M+ Sbjct: 116 FVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF 175 Query: 201 SXLRGRPVKIAYA 163 + G+ V++ A Sbjct: 176 HDIMGKKVEVKRA 188 Score = 35.4 bits (80), Expect = 0.034 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L W+ +++ LR +F + DK T SRGF V F+ + + Sbjct: 13 FVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 72 Query: 201 SXLRGRPV 178 L GR + Sbjct: 73 HTLDGRNI 80
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+GNL+ ++ + L+DFF + ++ + T S GF V F E +E A+ +N Sbjct: 187 YIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALN 246 Query: 204 QSXLRGRPVKI 172 S L G+ +++ Sbjct: 247 NSVLEGQKIRV 257
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVG+L ++SE L D F ++SIR D T S G+ +V+F E+ KA+ +N Sbjct: 40 YVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLN 99 Query: 204 QSXLRGRPVKIAYA 163 + ++GR +I ++ Sbjct: 100 YTPIKGRLCRIMWS 113 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 +V NL ++ ++ L + F + + G S+GF V F E KA+ NQ Sbjct: 324 FVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQ 383 Query: 201 SXLRGRPVKIAYA 163 + G+P+ +A A Sbjct: 384 QIVAGKPLYVAIA 396
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + N E +LR++FK + + D RGF + FE +S+++AV M+ Sbjct: 116 FVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF 175 Query: 201 SXLRGRPVKIAYA 163 + G+ V++ A Sbjct: 176 HDIMGKKVEVKRA 188 Score = 35.4 bits (80), Expect = 0.034 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L W+ +++ LR +F + DK T SRGF V F+ + + Sbjct: 13 FVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 72 Query: 201 SXLRGRPV 178 L GR + Sbjct: 73 HTLDGRNI 80
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVGNLS+++SE DL F + + ++ D+ TG RGF V+ E A+ ++ Sbjct: 4 YVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALD 63 Query: 204 QSXLRGRPVKI 172 + GR +K+ Sbjct: 64 GAEWMGRDLKV 74
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM-- 208 +VG++ +E+++R +F+ + + DKRTG +G C V + + ++A+ Sbjct: 123 FVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALH 182 Query: 207 NQSXLRG--RPVKIAYA 163 NQ L G PV++ YA Sbjct: 183 NQITLPGGTGPVQVRYA 199
>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic| region Length = 403 Score = 39.3 bits (90), Expect = 0.002 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE-SLEKAVGMN 205 +VGNLS+++++ LR F+ I IR A + +G +GF +DF+ E S + + Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKS 301 Query: 204 QSXLRGRPVKIAY 166 + GRP+++ Y Sbjct: 302 CRKIAGRPLRMEY 314 Score = 31.6 bits (70), Expect = 0.49 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 18/87 (20%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-----------------SRIASIRFAIDKRTG-DSRGFCH 253 ++GNLS++ ++ DL FF + +R++ R A ++GFC+ Sbjct: 128 WIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAAKNSNAMKNKGFCY 187 Query: 252 VDFEXXESLEKAVGMNQSXLRGRPVKI 172 + F+ E ++ + +++S L GR + I Sbjct: 188 MFFKNVEQMKAVLELSESHLNGRNMLI 214
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSS--RIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG- 211 A++ N+ +++ + L+D K + + +D G SRG V+F+ ES++KA Sbjct: 71 AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEV 129 Query: 210 MNQSXLRGRPVKI 172 +N+ L GRP+K+ Sbjct: 130 LNKHSLSGRPLKV 142
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VG L+W +++DL R F + + + D+ +G SRGF V F+ +++ A+ MN Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 204 QSXLRGRPVKI 172 L GR + + Sbjct: 69 GKELDGRVITV 79
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSS--RIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG- 211 A++ N+ +++ + L+D K + + +D G SRG V+F+ ES++KA Sbjct: 72 AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEV 130 Query: 210 MNQSXLRGRPVKI 172 +N+ L GRP+K+ Sbjct: 131 LNKHSLSGRPLKV 143
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%) Frame = -1 Query: 381 AYVGNLSWNISEKDLRDFFKSS--RIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG- 211 A++ N+ +++ + L+D K + + +D G SRG V+F+ ES++KA Sbjct: 71 AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEV 129 Query: 210 MNQSXLRGRPVKI 172 +N+ L GRP+K+ Sbjct: 130 LNKHSLSGRPLKV 142
>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) Length = 981 Score = 38.5 bits (88), Expect = 0.004 Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Frame = -1 Query: 378 YVGNLSWNISEKD--LRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 +V NL +++ E D LR F++ + IR R GD RG+ +V+F+ +S +A+ M Sbjct: 725 FVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSNR-GDFRGYRYVEFKEEKSALQALEM 783 Query: 207 NQSXLRGRPVKIA 169 ++ + GRP+ ++ Sbjct: 784 DRKSVEGRPMFVS 796
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -1 Query: 366 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLR 190 L+ I +DL DFF + ++ +R D+ + S+G +V+F +S+ A+G+ L Sbjct: 173 LAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLL 232 Query: 189 GRPV 178 G P+ Sbjct: 233 GVPI 236
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMN 205 ++ N+ ++ +E+D + F + + A+D RTG S+GF +V F+ E A + ++ Sbjct: 304 FLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELD 363 Query: 204 QSXLRGRPVKIAYAIINRA*RLSSW 130 + +GR + I A + RL + Sbjct: 364 KQIFQGRLLHILPADAKKTHRLDEF 388
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 38.1 bits (87), Expect = 0.005 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ LR+ F+ S S R D+ TG S+GF VDF E + A M Sbjct: 556 FVRGLSEDTTEETLRESFEGS--ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMED 613 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 614 GEIDGNKVTLDFA 626 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ- 202 +V NL + ++E ++++ F+++ +R ++K G S+G +++F+ EKA+ Q Sbjct: 374 FVKNLPYRVTEDEMKNVFENA--LEVRLVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQG 430 Query: 201 SXLRGRPVKIAY 166 + + GR + I Y Sbjct: 431 TEVDGRAMVIDY 442
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRI-ASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+GNL+ ++E D+ F + + + D+ TG+S+GF ++ +E S AV +N Sbjct: 34 YIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLN 93 Query: 204 QSXLRGRPVKI 172 + GR +KI Sbjct: 94 GFKIGGRALKI 104
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 38.1 bits (87), Expect = 0.005 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+G LS E L+D F S + + R +K TG SRG+ V+F +S A+ MN Sbjct: 34 YIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMN 93 Query: 204 QSXLRGRPVKIAYA 163 L G + + A Sbjct: 94 GQELNGFNISVNVA 107
>NOP12_CANAL (Q5AHI7) Nucleolar protein 12| Length = 454 Score = 38.1 bits (87), Expect = 0.005 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSR---IASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 +VGNL + E+ L +F S + S+R D +T +GF V F+ S+ KA+ + Sbjct: 268 FVGNLDFEEKEETLWKYFNSKLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALLL 327 Query: 207 NQSXL------RGRPVKIAYAIIN 154 N L +GR ++I+ A N Sbjct: 328 NDKPLETGTQKKGRKLRISRAKSN 351
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 38.1 bits (87), Expect = 0.005 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E LR++F+ +I S DK++G RGF V F + ++K V Sbjct: 103 FVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKY 162 Query: 201 SXLRGRPVKIAYAI 160 + G ++ A+ Sbjct: 163 HTINGHNAEVRKAL 176 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LS+ +E+ LR+F++ ++ D + SRGF V F ++ A+ Sbjct: 12 FIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARP 71 Query: 201 SXLRGRPVKIAYAI 160 + GR V+ A+ Sbjct: 72 HTIDGRVVEPKRAV 85
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMN 205 ++ N+ + +E D R F + + A+D RTG S+GF +V F+ ++ A V ++ Sbjct: 333 FLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELD 392 Query: 204 QSXLRGRPVKIAYAIINRA*RLSSW 130 + +GR + I A ++ +L + Sbjct: 393 KQIFQGRLLHILPADAKKSHKLDEF 417
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ +++SE+ + + F + + + +D TG +G+ +F E+ AV +N Sbjct: 10 FVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLN 69 Query: 204 QSXLRGRPVKIAY 166 S L R +++ + Sbjct: 70 NSELGPRKIRVEF 82
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 37.7 bits (86), Expect = 0.007 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQS 199 V NLS++ +E LR+ F+ + SIR I + G ++GF ++F E + A+ N + Sbjct: 418 VNNLSYSATEDSLREVFEKA--TSIR--IPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNT 473 Query: 198 XLRGRPVKIAYA 163 + GR +++ ++ Sbjct: 474 EIEGRSIRLEFS 485 Score = 37.0 bits (84), Expect = 0.012 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = -1 Query: 378 YVGNLSWNISEKD-----LRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 ++GNL+ + E D LR+FF + D R G+S+ F +VDF E +EKA+ Sbjct: 235 FIGNLN-STKEFDELKDALREFFSKKNLT----IQDIRIGNSKKFGYVDFSSEEEVEKAL 289 Query: 213 GMNQSXLRGRPVKIAYAI 160 + + G VKI A+ Sbjct: 290 KLTGKKILGTEVKIEKAM 307 Score = 35.4 bits (80), Expect = 0.034 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMNQ 202 +V LS + +E+ L++ F S + R D+ TG S+GF VDF E + A M Sbjct: 505 FVRGLSEDTTEETLKEAFDGS--VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMED 562 Query: 201 SXLRGRPVKIAYA 163 + G V + +A Sbjct: 563 GEIDGNKVTLDFA 575
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSR-IASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +V L+ ++ ++L DFF+ + + + DK +G S+G +V+F +S++ A+ ++ Sbjct: 243 FVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSG 302 Query: 201 SXLRGRPV 178 L G PV Sbjct: 303 KRLLGLPV 310
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE 232 Y+G++ + E LR++F + +R + K+TG+S+G+ +V+FE E Sbjct: 44 YIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDE 93
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -1 Query: 366 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLR 190 L+ I +DL +FF + ++ +R D+ + SRG +V+F S+ A+G+ + Sbjct: 160 LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIGLTGQRVL 219 Query: 189 GRP--VKIAYAIINRA 148 G P V+ + A NRA Sbjct: 220 GVPIIVQASQAEKNRA 235
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 37.4 bits (85), Expect = 0.009 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 V L+ N S+ +R+ F K I I+ ID +T SRGFC + FE A + Sbjct: 101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSG 160 Query: 201 SXLRGRPVKIAYAIINRA 148 + GR +++ ++I RA Sbjct: 161 IEVDGRRIRVDFSITQRA 178
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 37.4 bits (85), Expect = 0.009 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFE----XXESLEKAVG 211 V L+ N +++ +R+ F K I I+ ID T SRGFC + FE + + G Sbjct: 109 VFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTG 168 Query: 210 MNQSXLRGRPVKIAYAIINRA 148 M + GR +++ Y+I RA Sbjct: 169 ME---VDGRRIRVDYSITQRA 186
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +VGN+ + +E+ L+D F + S R D+ TG +G+ +++ E+ A+ +N Sbjct: 19 FVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78 Query: 204 QSXLRGRPVKI 172 GR +++ Sbjct: 79 GREFSGRALRV 89
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L +++E DL + F + DK++G RGF V F+ ++ +KA + Sbjct: 101 FVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKF 160 Query: 201 SXLRGRPVKIAYAI 160 ++G V++ A+ Sbjct: 161 HPIQGHRVEVKKAV 174
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 37.0 bits (84), Expect = 0.012 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ ++ L+D F K S++ D+ +G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKELNGKQIYVGRA 266
>GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)| Length = 479 Score = 37.0 bits (84), Expect = 0.012 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = -1 Query: 366 LSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLRG 187 L ++ +EKD+ DFF I I F +D R G +V FE E +A+ ++ + Sbjct: 256 LPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 315 Query: 186 RPVKI 172 R ++I Sbjct: 316 RYIEI 320
>GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1)| Length = 447 Score = 37.0 bits (84), Expect = 0.012 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = -1 Query: 366 LSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLRG 187 L ++ +EKD+ DFF I I F +D R G +V FE E +A+ ++ + Sbjct: 224 LPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGN 283 Query: 186 RPVKI 172 R ++I Sbjct: 284 RYIEI 288
>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1| Length = 833 Score = 37.0 bits (84), Expect = 0.012 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA 217 ++ NL+++ +E DL+ F ++ + IDK+T + +GF ++DF + +A Sbjct: 326 FLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRA 380
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.0 bits (84), Expect = 0.012 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ ++ L+D F K S++ D+ +G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKELNGKQIYVGRA 266
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.0 bits (84), Expect = 0.012 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ ++ L+D F K S++ D+ +G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKELNGKQIYVGRA 266
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 37.0 bits (84), Expect = 0.012 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ +K LR+ F + S++ +D TG SRGF V++ E +KAV MN Sbjct: 194 YIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMN 252 Query: 204 QSXLRGRPVKIAYA 163 + GR + + A Sbjct: 253 GKEVNGRMIYVGRA 266
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 36.6 bits (83), Expect = 0.015 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++G+L ++E+ L+ FK S + +D T S G +++FE E EKA+ +N Sbjct: 94 FIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELN 153 Query: 204 QSXLRGRPVKIAYAIIN 154 + + G+ ++I ++ N Sbjct: 154 YTKVNGKEIRIMPSLRN 170
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEX-XESLEKAVGMNQ 202 ++G L+ +EK L+ F S I RT SRGF + FE ++ A MN Sbjct: 11 FIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNG 70 Query: 201 SXLRGRPVKIAYA 163 L G+ +K+ A Sbjct: 71 KSLHGKAIKVEQA 83
>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) Length = 156 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNLS+ +E+ + + F KS I I +DK + GFC V++ E A+ Sbjct: 43 YVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98
>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1) (Cell proliferation-inducing gene 55 protein) Length = 156 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNLS+ +E+ + + F KS I I +DK + GFC V++ E A+ Sbjct: 43 YVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98
>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2| Length = 156 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNLS+ +E+ + + F KS I I +DK + GFC V++ E A+ Sbjct: 43 YVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAM 98
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 36.2 bits (82), Expect = 0.020 Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE 232 Y+G++ ++ E L+++F + +R + K+TG+S+G+ +V++E E Sbjct: 44 YIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDE 93
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 36.2 bits (82), Expect = 0.020 Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDF-EXXESLEKAVGMN 205 ++ N+ ++ +E D + F + + A+D RTG+S+GF +V F + E+++ + ++ Sbjct: 328 FLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELD 387 Query: 204 QSXLRGRPVKIAYA 163 + +GR + I A Sbjct: 388 KQIFQGRLLHILAA 401
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 36.2 bits (82), Expect = 0.020 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -1 Query: 366 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLR 190 L+ I +DL +FF + ++ +R D+ + S+G +V+F S+ A+G+ + Sbjct: 160 LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVL 219 Query: 189 GRP--VKIAYAIINRA 148 G P V+ + A NRA Sbjct: 220 GVPIIVQASQAEKNRA 235
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 36.2 bits (82), Expect = 0.020 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA-VGMN 205 ++ N+ + E+D R F + + A+D RTG S+GF +V F+ ++ A V ++ Sbjct: 348 FLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELD 407 Query: 204 QSXLRGRPVKI 172 + +GR + I Sbjct: 408 KQIFQGRLLHI 418
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 36.2 bits (82), Expect = 0.020 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VGNL + ++ DL++ F + +I +R + TG +GF VDF ++ KA+ + Sbjct: 231 FVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAMELGH 290 Query: 201 SXLR 190 + R Sbjct: 291 NSWR 294 Score = 34.3 bits (77), Expect = 0.075 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 20/89 (22%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-------------------KSSRIASIRFAIDK-RTGDSRGF 259 +VGNLS++ +++ L DFF + +I I + K + ++GF Sbjct: 108 WVGNLSFHTTKEILTDFFVRETSEMIKEVSEENIKPITTEQITRIHMPMSKEKRFQNKGF 167 Query: 258 CHVDFEXXESLEKAVGMNQSXLRGRPVKI 172 +VDF ++L+ A+ ++ L GR + I Sbjct: 168 AYVDFATEDALKLALQCSEKALNGRNILI 196
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 35.8 bits (81), Expect = 0.026 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 YVG L +SE L + ++ + S+ D+ T + +GF V+F E + A+ +N Sbjct: 16 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75 Query: 204 QSXLRGRPVKI 172 L G+P+K+ Sbjct: 76 MIKLYGKPIKV 86
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 35.8 bits (81), Expect = 0.026 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXES 229 ++ NL + E+D R F + + I+ +TG +GF HV FE E+ Sbjct: 304 FLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPEN 354
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 35.4 bits (80), Expect = 0.034 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ +K LR+ F + S++ +D +G SRGF V++ E +KAV MN Sbjct: 194 YIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMN 252 Query: 204 QSXLRGRPVKIAYA 163 + GR + + A Sbjct: 253 GKEVNGRMIYVGRA 266
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 35.4 bits (80), Expect = 0.034 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 YVG+L +++E L D F + + ++R D T S G+ +V+F E +A+ +N Sbjct: 48 YVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESLN 106 Query: 204 QSXLRGRPVKIAYAIINRA*RLS 136 + +R RP++I + + + RLS Sbjct: 107 YAPIRDRPIRIMLSNRDPSTRLS 129
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 35.4 bits (80), Expect = 0.034 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L W+ +++ LR +F + DK T SRGF V F+ + + Sbjct: 13 FVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 72 Query: 201 SXLRGRPV 178 L GR + Sbjct: 73 HTLDGRNI 80
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 35.4 bits (80), Expect = 0.034 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ ++ L++ F K S++ D+ +G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKELNGKQIYVGRA 266
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 35.4 bits (80), Expect = 0.034 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 Y+ N ++ ++ L++ F K S++ D+ +G S+GF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKELNGKQIYVGRA 266
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 35.4 bits (80), Expect = 0.034 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE 232 YVG+L + E L+ +F+ ++ +R + K+TG S+G+ V+FE E Sbjct: 48 YVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDE 97
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 35.0 bits (79), Expect = 0.044 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQS 199 + NLS+ SE DL+ F K G RGF V F+ KA+ GMN Sbjct: 117 IRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMK 176 Query: 198 XLRGRPVKIAYAI 160 ++GR V + +A+ Sbjct: 177 EIKGRTVAVDWAV 189
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+G++ ++ +E+ + D + + +++ D +TG S+G+ ++F ES AV +N Sbjct: 21 YLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLN 80 Query: 204 QSXLRGRPVKIAYA 163 L R +K Y+ Sbjct: 81 GYQLGSRFLKCGYS 94
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 35.0 bits (79), Expect = 0.044 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++ NLS+ ++E D+R+ F K + + +D + G S+GF + +E S A + Sbjct: 311 FLRNLSYTVTEDDVREHFAKFGILVEVHVPLDSK-GHSKGFAMIRYEKPASALAAFQTDG 369 Query: 201 SXLRGRPVKIAYAIINRA*RLSSW 130 + +GR V I A R +L + Sbjct: 370 TVFQGRIVHILPAAAKRENKLDEF 393
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 35.0 bits (79), Expect = 0.044 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 366 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 L W +E+DL+D+F + + ++ D +TG S+GF V F E+ K + Sbjct: 111 LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 34.7 bits (78), Expect = 0.057 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 ++ NL +I K L D F S I S + A+D +G S+G+ V + ES +KA+ Sbjct: 127 FIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAI 181 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YV NL+ + ++ DL++ F + + G S+GF V+FE + +AV Sbjct: 218 YVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAV 272
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 34.7 bits (78), Expect = 0.057 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIA-SIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+ N ++ ++ L+++F A S++ D G SRGF V FE E +KAV MN Sbjct: 194 YIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMN 252 Query: 204 QSXLRGRPVKIAYA 163 L G+ + + A Sbjct: 253 GKDLNGKAIFVGRA 266
>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6| Length = 545 Score = 34.7 bits (78), Expect = 0.057 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 Y+GNL+W +++DL D +S + + I+F ++ G S+GF V S K + + Sbjct: 84 YIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDL 143
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 34.7 bits (78), Expect = 0.057 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQS 199 YVGNL ++ EK++ D F + I++ +D ++G F V+FE E AV Sbjct: 12 YVGNLPGDVREKEVEDIF--HKYGRIKY-VDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68 Query: 198 -XLRGRPVKIAY 166 GR +++ + Sbjct: 69 YEFDGRRIRVEF 80
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 34.7 bits (78), Expect = 0.057 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW +++ LR++F + + D T SRGF V F ++K + ++ Sbjct: 23 FIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 82 Query: 201 SXLRGRPVKIAYAIINRA 148 L + + A RA Sbjct: 83 HELDSKTIDPKVAFPRRA 100
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 34.7 bits (78), Expect = 0.057 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW +++ LR++F + + D T SRGF V F ++K + ++ Sbjct: 23 FIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 82 Query: 201 SXLRGRPVKIAYAIINRA 148 L + + A RA Sbjct: 83 HELDSKTIDPKVAFPRRA 100
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 34.7 bits (78), Expect = 0.057 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++G LSW +++ LR++F + + D T SRGF V F ++K + ++ Sbjct: 23 FIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 82 Query: 201 SXLRGRPVKIAYAIINRA 148 L + + A RA Sbjct: 83 HELDSKTIDPKVAFPRRA 100
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 34.3 bits (77), Expect = 0.075 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 +VG + + +E DLR FF ++ R G S+G+ V FE E +K Sbjct: 36 FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 34.3 bits (77), Expect = 0.075 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 +VG + + +E DLR FF ++ R G S+G+ V FE E +K Sbjct: 36 FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 34.3 bits (77), Expect = 0.075 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YV N + + ++ L++FF+ +I S + + K G S+GF V FE E+ E AV Sbjct: 186 YVKNFTEDFDDEKLKEFFEPYGKITSYK-VMSKEDGKSKGFGFVAFETTEAAEAAV 240
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 34.3 bits (77), Expect = 0.075 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+ N ++ +K L++ F + S++ +D +G SRGF V++ E +KAV MN Sbjct: 194 YIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMN 252 Query: 204 QSXLRGRPVKIAYA 163 + GR V + A Sbjct: 253 GKEVNGRMVYVGRA 266
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 34.3 bits (77), Expect = 0.075 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 Y+GNL+W +++DL D S + I I+F ++ G S+GF + S +K + + Sbjct: 84 YIGNLTWWTTDEDLTDAVHSLGVNDILEIKFFENRANGQSKGFALICVSSESSSKKLMDL 143
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 33.9 bits (76), Expect = 0.098 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 +VG + + +E DLR FF ++ R G S+G+ + FE E +K Sbjct: 36 FVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQK 88
>NOP12_DEBHA (Q6BTS9) Nucleolar protein 12| Length = 462 Score = 33.9 bits (76), Expect = 0.098 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSR---IASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 +VGNL + E+ L +F S + S+R D +T +GF V F+ S+ K++ + Sbjct: 269 FVGNLDFEEKEETLWRYFNSKTDNDVESVRVIRDAKTNVGKGFALVQFKDTLSVNKSLLL 328 Query: 207 N---QSXLRGRPVKIAYA 163 N S + R ++I+ A Sbjct: 329 NDKPMSAEKKRKLRISKA 346
>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap| binding protein) (NCBP 20 kDa subunit) (CBP20) (Fragment) Length = 148 Score = 33.9 bits (76), Expect = 0.098 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDF 244 YVGNLS+ +E+ + + F KS + I +DK + GFC V++ Sbjct: 35 YVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEY 80
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 33.5 bits (75), Expect = 0.13 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 +V NLS+ SE+DL F + ++ + + ID T +GF V F E KA ++ Sbjct: 403 FVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVD 462 Query: 204 QSXLRGRPVKIAYAIINR 151 +GR + + + I + Sbjct: 463 GQVFQGRMLHVLPSTIKK 480
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -1 Query: 330 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL 193 F + +I S + DK TGDS + ++F+ ES+EKA Q+ L Sbjct: 264 FSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVL 309
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 33.5 bits (75), Expect = 0.13 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 366 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 L W +E+DL+++F + + ++ D +TG S+GF V F E+ K + Sbjct: 111 LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +V N++ + +DLR +F + I + +D T RGF +V FE E A+ ++ Sbjct: 13 FVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLD 72 Query: 204 QSXLRGRPVKIAYA 163 + + GR ++I +A Sbjct: 73 RKWICGRQIEIQFA 86
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 +V N++ + +DLR +F + I + +D T RGF +V FE E A+ ++ Sbjct: 13 FVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLD 72 Query: 204 QSXLRGRPVKIAYA 163 + + GR ++I +A Sbjct: 73 RKWICGRQIEIQFA 86
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 33.1 bits (74), Expect = 0.17 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA 217 V NLS + E++LRD F+ I + A DK TG ++GF V + + KA Sbjct: 206 VTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKA 259
>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)| Length = 261 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++ N++ +DLR +F + I + +D T RGF +V FE E A+ +N Sbjct: 13 FIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLN 72 Query: 204 QSXLRGRPVKIAYA 163 + + GR ++I +A Sbjct: 73 RKWVCGRQIEIQFA 86
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 33.1 bits (74), Expect = 0.17 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 V L ++++++L F++ I + R D +TG S G+ VDF ++A+ +N Sbjct: 114 VNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNG 173 Query: 201 SXLRGRPVKIAYA 163 +R + +K++YA Sbjct: 174 ITVRNKRLKVSYA 186
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 33.1 bits (74), Expect = 0.17 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 YVGNL+ + + DL +F K ++ S+ A + GF V+FE + EKA +N Sbjct: 10 YVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-----GFAFVEFEHRDDAEKACDILN 64 Query: 204 QSXLRGRPVKI 172 S L G +++ Sbjct: 65 GSELLGSQLRV 75
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 32.7 bits (73), Expect = 0.22 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+G LS+N+ EKD++ FF R+ + G+ V+FE + AV +N Sbjct: 5 YIGRLSYNVREKDIQRFFSGYGRLLEVDL--------KNGYGFVEFEDSRDADDAVYELN 56 Query: 204 QSXLRGRPVKIAYA 163 L G V + +A Sbjct: 57 GKELCGERVIVEHA 70
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 32.7 bits (73), Expect = 0.22 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++R FF +R S++ I RTG S+G+ V F ++K V + Sbjct: 43 FVGGIDVRMDETEIRSFF--ARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIV-ES 99 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 100 QINFHGKKLKLGPAI 114
>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1| (RNA-binding protein srp-5) (CeSRp75) Length = 312 Score = 32.7 bits (73), Expect = 0.22 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 Y+G L+ +SEKD+ FF+ IR + K GF V+F+ E AV +N Sbjct: 6 YIGRLTSRVSEKDIEHFFRG--YGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNG 58 Query: 201 SXLRGRPVKIAYA 163 L G V + Y+ Sbjct: 59 KELGGERVILDYS 71
>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) Length = 317 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE 232 Y+G+L +SE + ++ I+ R + KRTG+S+G+ V+FE + Sbjct: 50 YLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESED 99
>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 Y+GNL+W +++DL + S + I I+F ++ G S+GF V S +K + + Sbjct: 84 YIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDL 143
>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6| (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68-kDa subunit) (Protein HPBRII-4/7) Length = 551 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 Y+GNL+W +++DL + S + I I+F ++ G S+GF V S +K + + Sbjct: 84 YIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDL 143
>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGM 208 Y+GNL+W +++DL + S + I I+F ++ G S+GF V S +K + + Sbjct: 84 YIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDL 143
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQS 199 +VG + ++E ++R +F+ I RTG S+G+ V F ++K V +Q Sbjct: 39 FVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIV-ESQI 97 Query: 198 XLRGRPVKIAYAI 160 + G+ +K+ AI Sbjct: 98 SVHGKRLKLGPAI 110
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L+ N+SEKDL+ F+ RI +I+ K G V + + EKA+ Q Sbjct: 300 FVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCG------FVQYSEKSAAEKAINTMQ 353 Query: 201 SXLRG 187 L G Sbjct: 354 GALVG 358
>RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 564 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRG--FCHVDFEXXESLEKA-VGM 208 ++GNL ++SE +LR F+ I I + KR +G + + F+ + +A V M Sbjct: 13 FIGNLDHSVSEVELRRAFEKYGI--IEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAM 70 Query: 207 NQSXLRGRPVKIAYAIINRA*RL 139 + + P+KI Y N RL Sbjct: 71 SGRVIGRNPIKIGYGKANPTTRL 93
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 32.0 bits (71), Expect = 0.37 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 V L ++++++L F++ I + R D +TG S G+ VDF + A+ +N Sbjct: 89 VNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNG 148 Query: 201 SXLRGRPVKIAYA 163 +R + +K++YA Sbjct: 149 VTVRNKRLKVSYA 161
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA-IDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 +V NL ++++ + L++ F S+ + FA I G S+G V FE ES EKA MN Sbjct: 517 FVRNLPFDLTWQKLKEKF--SQCGHVMFAEIKMENGKSKGCGTVRFESAESAEKACRIMN 574 Query: 204 QSXLRGRPVKI 172 + GR + + Sbjct: 575 GIKISGREIDV 585
>SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12| (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (SR-related protein of 86 kDa) Length = 494 Score = 32.0 bits (71), Expect = 0.37 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKD-LRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 YVGNL+ + D L +FFK + +R A D+ T +R F V+F S+ +A+ N Sbjct: 72 YVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDE-TQPTR-FAFVEFADQNSVPRALAFN 129 Query: 204 QSXLRGRPVKIAYA 163 RP+KI ++ Sbjct: 130 GVMFGDRPLKINHS 143
>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12| (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) Length = 494 Score = 32.0 bits (71), Expect = 0.37 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKD-LRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 YVGNL+ + D L +FFK + +R A D+ T +R F V+F S+ +A+ N Sbjct: 72 YVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDE-TQPTR-FAFVEFADQNSVPRALAFN 129 Query: 204 QSXLRGRPVKIAYA 163 RP+KI ++ Sbjct: 130 GVMFGDRPLKINHS 143
>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2| Length = 218 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEX-XESLEKAVGMN 205 YVGNLS+ SE+ L + F K I I +D+ GFC + ++ E+L ++ Sbjct: 49 YVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYLS 108 Query: 204 QSXLRGRPVKI 172 ++ L R + I Sbjct: 109 KTKLDDREITI 119
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 32.0 bits (71), Expect = 0.37 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MNQ 202 V L ++++++L F++ I + R D +TG S G+ VDF ++A+ +N Sbjct: 131 VNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNG 190 Query: 201 SXLRGRPVKIAYA 163 +R + +K++YA Sbjct: 191 ITVRNKRLKVSYA 203
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 32.0 bits (71), Expect = 0.37 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVG-MNQ 202 V L ++++++L F++ I + R D +TG S G+ VDF ++A+ +N Sbjct: 129 VNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNG 188 Query: 201 SXLRGRPVKIAYA 163 +R + +K++YA Sbjct: 189 ITVRNKRLKVSYA 201
>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12| (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (Splicing regulatory protein 508) (SRrp508) Length = 508 Score = 32.0 bits (71), Expect = 0.37 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKD-LRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 YVGNL+ + D L +FFK + +R A D+ T +R F V+F S+ +A+ N Sbjct: 69 YVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDE-TQPTR-FAFVEFADQNSVPRALAFN 126 Query: 204 QSXLRGRPVKIAYA 163 RP+KI ++ Sbjct: 127 GVMFGDRPLKINHS 140
>RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 563 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRG--FCHVDFEXXESLEKA-VGM 208 ++GNL ++SE +LR F+ I I + KR +G + + F+ + +A V M Sbjct: 13 FIGNLDHSVSEVELRRAFEKYGI--IEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAM 70 Query: 207 NQSXLRGRPVKIAYAIINRA*RL 139 + + P+KI Y N RL Sbjct: 71 SGRVIGRNPIKIGYGKANPTTRL 93
>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)| Length = 165 Score = 31.6 bits (70), Expect = 0.49 Identities = 16/76 (21%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEX-XESLEKAVGMN 205 +V ++ E ++++ F I +I +D+RTG S+G+ V++E ++L +N Sbjct: 76 FVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALN 135 Query: 204 QSXLRGRPVKIAYAII 157 + + G+ +++ + + Sbjct: 136 GAEIMGQTIQVDWCFV 151
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 31.6 bits (70), Expect = 0.49 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG +S + +E DL F + + S + +D R G S+G+ V FE + ++ + Sbjct: 36 FVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQRLQADGE 94 Query: 201 S-XLRGRPVKIAYAI 160 LR R + IA AI Sbjct: 95 CVVLRDRKLNIAPAI 109
>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9| Length = 221 Score = 31.6 bits (70), Expect = 0.49 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL ++ EKDL D F+K RI I K F V FE E A+ Sbjct: 17 YVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAI 69
>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing| factor SRp30C) Length = 221 Score = 31.6 bits (70), Expect = 0.49 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL ++ EKDL D F+K RI I K F V FE E A+ Sbjct: 17 YVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAI 69
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 31.2 bits (69), Expect = 0.63 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 ++ NL +I K L D F + I S + D+ S+G+ V FE E+ +KA+ MN Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYAFVHFETQEAADKAIEKMN 159 Query: 204 QSXLRGRPV 178 L R V Sbjct: 160 GMLLNDRKV 168 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+ N + ++ L++ F + S++ D G S+GF V +E E KAV MN Sbjct: 194 YIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMN 252 Query: 204 QSXLRGRPVKIAYA 163 + G+ + + A Sbjct: 253 GKEISGKIIFVGRA 266
>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) Length = 273 Score = 31.2 bits (69), Expect = 0.63 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 291 IDKRTGDSRGFCHVDFEXXESLEKAV-GMNQSXLRGRPVKIAYA 163 +D +T RGF V+FE E A+ MN+S + GR +++ A Sbjct: 3 MDYQTEKHRGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVA 46
>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9| Length = 222 Score = 31.2 bits (69), Expect = 0.63 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL ++ EKDL D F+K RI I K F V FE E A+ Sbjct: 18 YVGNLPSDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAI 70
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIAS-IRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +VGNL+++ + +DL +FF S+I +R I G RG V+F + +++A+ Sbjct: 139 FVGNLTYDSTPEDLTEFF--SQIGKVVRADIITSRGHHRGMGTVEFTNSDDVDRAI 192
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 30.8 bits (68), Expect = 0.83 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 Y+ L N +++DL + +I S + +DK T +G+ VDF+ + +KAV Sbjct: 65 YIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 30.8 bits (68), Expect = 0.83 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 V L ++++++L F++ I + R D +TG S G+ VDF + A+ +N Sbjct: 106 VNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNG 165 Query: 201 SXLRGRPVKIAYA 163 +R + +K++YA Sbjct: 166 ITVRNKRLKVSYA 178
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 30.8 bits (68), Expect = 0.83 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 330 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL 193 F + +I S DKRTGDS + ++FE + E+A Q L Sbjct: 268 FSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVL 313
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 30.8 bits (68), Expect = 0.83 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L ++ ++ LR +F+ I D++TG SRG+ V + E+A Sbjct: 14 FVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN 73 Query: 201 SXLRGRPVKIAYAII 157 + GR + A + Sbjct: 74 PIIDGRKANVNLAYL 88
>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 475 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSS-RIASIRFA-----IDKRTGDSRGFCHVDFEXXESLEKA 217 YVGN+ + I+E+ + DFF + R+ + A + + + F ++F + +A Sbjct: 152 YVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQA 211 Query: 216 VGMNQSXLRGRPVKI 172 + + +G+ +KI Sbjct: 212 MAFDGIIFQGQSLKI 226
>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) Length = 475 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSS-RIASIRFA-----IDKRTGDSRGFCHVDFEXXESLEKA 217 YVGN+ + I+E+ + DFF + R+ + A + + + F ++F + +A Sbjct: 152 YVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQA 211 Query: 216 VGMNQSXLRGRPVKI 172 + + +G+ +KI Sbjct: 212 MAFDGIIFQGQSLKI 226
>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1| Length = 283 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +D+ S+G+ +V+FE E EKA+ Sbjct: 141 HIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKAL 197
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 Y+ L +++DL + +I S + +DK T +G+ VDF+ S +KAV Sbjct: 61 YIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAV 116
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Frame = -1 Query: 351 SEKDLRDFFKSSRIAS--IRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLR--GR 184 +E D+R +S + + +R +K +G SRGF V+F + + + NQ L G+ Sbjct: 141 TEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQ 200 Query: 183 PVKIAYA 163 V + Y+ Sbjct: 201 KVSMHYS 207
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +V L+ +++DL F + +I S D++TGDS + ++FE +S E+A Sbjct: 256 FVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKMD 315 Query: 201 SXL 193 S L Sbjct: 316 SVL 318
>RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif protein 5)| (Putative tumor suppressor LUCA15) (G15 protein) (NY-REN-9 antigen) Length = 815 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Frame = -1 Query: 354 ISEKDLRDF---FKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL--R 190 I+E D+R+ F+ + A +R + ++TG SRGF V+F + + NQ L + Sbjct: 109 ITESDIREMMESFEGPQPADVRL-MKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQ 167 Query: 189 GRPVKIAYA 163 G+ + + Y+ Sbjct: 168 GKHIAMHYS 176
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 43 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 99 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 100 QIHFHGKKLKLGPAI 114
>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor| 59 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF59) Length = 517 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMN 205 Y+ NL N+ E + + K + S + + G S+GFC +F+ E A+ G++ Sbjct: 313 YISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGLD 372 Query: 204 QSXLRGRPVKIAYAII 157 G + +A + Sbjct: 373 GKDTYGNKLHAQFACV 388
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA-IDKRTGDSRGFCHVDFEXXESLEKAVG-MN 205 +V NL ++++ + L++ F S+ + FA I G S+G V F+ ES EKA MN Sbjct: 526 FVRNLPFDLTWQKLKEKF--SQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMN 583 Query: 204 QSXLRGRPVKI 172 + GR + + Sbjct: 584 GIKISGREIDV 594
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXE 232 YV +L + E + +F + R + KRTG+S+G+ V+FE + Sbjct: 48 YVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESED 97
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 43 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 99 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 100 QIHFHGKKLKLGPAI 114
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 373 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 429 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 430 QIHFHGKKLKLGPAI 444 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 208 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 264 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 265 QIHFHGKKLKLGPAI 279 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 43 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 99 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 100 QIHFHGKKLKLGPAI 114
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDF-EXXESLEKAVGMNQ 202 V L ++ +++L F++ I + R D +TG S G+ VDF ++L +N Sbjct: 82 VNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNG 141 Query: 201 SXLRGRPVKIAYA 163 +R + +K+++A Sbjct: 142 ITVRNKRIKVSFA 154
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 208 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 264 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 265 QIHFHGKKLKLGPAI 279 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFA--IDKRTGDSRGFCHVDFEXXESLEKAVGMN 205 +VG + + E ++ F R S++ I RTG S+G+ V F ++K VG + Sbjct: 43 FVGGIDARMDETEIGSCF--GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG-S 99 Query: 204 QSXLRGRPVKIAYAI 160 Q G+ +K+ AI Sbjct: 100 QIHFHGKKLKLGPAI 114
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFK------------SSRIASIRFAIDKRTGDSRGFCHVDFEXX 235 YVGN+ + ++E+++ +FF S + + + +DK F ++F Sbjct: 96 YVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDK------NFAFLEFRSI 149 Query: 234 ESLEKAVGMNQSXLRGRPVKI 172 + +A+ + L+G+ +KI Sbjct: 150 DETTQAMAFDGINLKGQSLKI 170
>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7| Length = 471 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRI---ASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 YVG+ SW +++ L +S + ++FA ++ G S+G+ V S+ K Sbjct: 85 YVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHK 140
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRI---ASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 YVG+ SW +++ L +S + ++FA ++ G S+G+ V S+ K Sbjct: 85 YVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHK 140
>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7| Length = 462 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRI---ASIRFAIDKRTGDSRGFCHVDFEXXESLEK 220 YVG+ SW +++ L +S + ++FA ++ G S+G+ V S+ K Sbjct: 85 YVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHK 140
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG L ++ ++ LR +F+ I D++TG SRG+ V + ++A Sbjct: 35 FVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPN 94 Query: 201 SXLRGRPVKIAYAII 157 + GR + A + Sbjct: 95 PIIDGRKANVNLAYL 109
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++GNL + + +L+DFF+S + +R G F V F+ E ++K + Sbjct: 343 FIGNLPHEVDKSELKDFFQSYGNVVELRI---NSGGKLPNFGFVVFDDSEPVQKVLSNRP 399 Query: 201 SXLRG 187 RG Sbjct: 400 IMFRG 404
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -1 Query: 330 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL 193 F + +I S DK++GDS + ++F+ E+ E+A Q+ L Sbjct: 266 FSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQAYFKMQNVL 311
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 Y+ L +++DL + +I S + +DK T +G+ VDF+ + +KAV Sbjct: 59 YIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV 114
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +V L+ ++DL+ F + I S DKRTGDS + ++FE + E+A Q Sbjct: 251 FVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQ 310 Query: 201 SXL 193 L Sbjct: 311 GVL 313
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 330 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL 193 F + I S DKRTGDS + ++FE + E+A Q L Sbjct: 268 FSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVL 313
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VGNL +I E +L++FF S + +R G F V F+ E +++ + Sbjct: 334 FVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKP 393 Query: 201 SXLRG 187 RG Sbjct: 394 IMFRG 398
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VGNL +I E +L++FF S + +R G F V F+ E +++ + Sbjct: 334 FVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKP 393 Query: 201 SXLRG 187 RG Sbjct: 394 IMFRG 398
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -1 Query: 330 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXL 193 F + +I S DK+TGDS + ++F+ + E+A Q+ L Sbjct: 282 FSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKMQNVL 327
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I E+++ D F K + I + R G+ V+F+ E A+ Sbjct: 10 YVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPR---PPGYAFVEFDDARDAEDAI 62
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA 217 +V ++++ +E LR +F I I +KR+G RG+ +++E + A Sbjct: 106 FVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSA 160
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 Y+ L + +++DL + +I S + +DK T +G+ VDF+ + +KAV Sbjct: 65 YIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAV 120
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = -1 Query: 375 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV-GMNQ 202 + NL + +++D+RD F S ++ S+R K +RGF V++ + A+ + Sbjct: 723 IKNLPFEATKRDIRDLFSSQGQLKSVRLP-KKFDNTTRGFGFVEYSTVREAQSAMEALKH 781 Query: 201 SXLRGRPVKIAYA 163 + L GR + + ++ Sbjct: 782 THLLGRHLVLQWS 794
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA 217 +V ++++ +E LR +F I I KR+G RG+ +++E + A Sbjct: 106 FVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
>SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing| factor SF2, P33 subunit) (Alternative splicing factor ASF-1) Length = 247 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLR-DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKA 217 +V ++++ +E LR +F I I KR+G RG+ +++E + A Sbjct: 106 FVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
>SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1| Length = 256 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1| Length = 267 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 19 YVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 71
>NCBP2_YEAST (Q08920) Nuclear cap-binding protein subunit 2| Length = 208 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHV 250 YVGNLS+ SE+ + + F K I I +D+ GFC + Sbjct: 49 YVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCGFCFI 92
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 YV + + +E L ++F K + +DK T RGF V F+ +S+++ V Sbjct: 117 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 176 Query: 201 SXLRG 187 + G Sbjct: 177 HMVNG 181
>Y891_METTH (O26977) UPF0095 protein MTH891| Length = 381 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 351 SEKDLRDFFKSSRIASIRFAIDKRTGDSRG 262 ++ DLR+F K+ RI I+ I R G S+G Sbjct: 42 NDLDLREFQKTGRIGRIKVNITSRGGKSKG 71
>SFRS1_BRARE (Q6NYA0) Splicing factor, arginine/serine-rich 1| Length = 245 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDVEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>SF1L1_BRARE (Q7SXP4) Splicing factor, arginine/serine-rich 1-like protein 1| Length = 245 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 YVGNL +I KD+ D F+K I I ++R G F V+FE E AV Sbjct: 18 YVGNLPPDIRTKDVEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAV 70
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAV 214 +V N+ +I ++ L++ F I +G S+GF V +E E+ +KAV Sbjct: 202 FVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 ++GNL + + +L+DFF++ + +R G F V F+ E ++K + Sbjct: 341 FIGNLPHEVDKSELKDFFQNFGNVVELRI---NSGGKLPNFGFVVFDDSEPVQKVLSNRP 397 Query: 201 SXLRG 187 RG Sbjct: 398 IMFRG 402
>DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protein) (zDazl)| Length = 229 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQ 202 +VG + + E ++R+FF K + ++ I R G +G+ V F ++ V Sbjct: 50 FVGGIDMKVDENEIREFFAKYGSVKEVKI-ITYRGGICKGYGFVYFSEDVDIQTIVDQPI 108 Query: 201 SXLRGRPVKIAYAII 157 S +G+ +K+ AI+ Sbjct: 109 S-FKGKKLKLGPAIM 122
>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)| (S1-1 protein) Length = 852 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -1 Query: 303 IRFAIDKRTGDSRGFCHVDFEXXESLEKAVGMNQSXLR--GRPVKIAYA 163 +R +K +G SRGF V+F + + + NQ L G+ V + Y+ Sbjct: 82 VRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS 130
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +++ S+G+ +V+FE + EKA+ Sbjct: 164 HIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +++ S+G+ +V+FE + EKA+ Sbjct: 164 HIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +++ S+G+ +V+FE + EKA+ Sbjct: 164 HIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +++ S+G+ +V+FE + EKA+ Sbjct: 164 HIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGD-SRGFCHVDFEXXESLEKAV 214 ++G L+ N+++ + + F + +I I +++ S+G+ +V+FE + EKA+ Sbjct: 164 HIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of| deformed) (52-kDa bracketing protein) (B52 protein) Length = 375 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = -1 Query: 378 YVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGD---SRGFCHVDFEXXESLEKAV-G 211 YVG L + + E+DL FFK RT D G+ V+FE + AV Sbjct: 6 YVGGLPYGVRERDLERFFKGY----------GRTRDILIKNGYGFVEFEDYRDADDAVYE 55 Query: 210 MNQSXLRGRPVKI 172 +N L G V + Sbjct: 56 LNGKELLGERVVV 68
>BTNL8_HUMAN (Q6UX41) Butyrophilin-like protein 8 precursor| Length = 500 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%) Frame = +1 Query: 61 WKQXRGQDLTTES------HQLNNAKRLAPARQPSGPVDDSIRYLHGS-SAQXRLIHPDS 219 WK +GQDL+T+S H L + + ++ +G + S+R+ H S + R+ D+ Sbjct: 167 WKGPQGQDLSTDSRTNRDMHGLFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGDT 226 Query: 220 FLK 228 F + Sbjct: 227 FFE 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,515,317 Number of Sequences: 219361 Number of extensions: 711268 Number of successful extensions: 1962 Number of sequences better than 10.0: 239 Number of HSP's better than 10.0 without gapping: 1874 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1940 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
