ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28b23 |
|---|---|
| Clone Library Name | barley_pub |
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 227 bits (579), Expect = 2e-59 Identities = 110/120 (91%), Positives = 116/120 (96%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 412 LTKSDF EPVNIGSDEMVSMNEMAEI+L FED++LPIHHIPGPEGVRGRNSDNTLIKEKL Sbjct: 259 LTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPEGVRGRNSDNTLIKEKL 318 Query: 411 GWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 232 GWAPTMKLKDGLRFTYFWIKEQIEKE+T+G D+A YGSSKVVSTQAPVQLGSLRAADGKE Sbjct: 319 GWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVVSTQAPVQLGSLRAADGKE 378
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 219 bits (557), Expect = 6e-57 Identities = 106/120 (88%), Positives = 113/120 (94%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 412 LTKSDF EPVNIGSDEMVSMNEMAEIVL FE+K+LPIHHIPGPEGVRGRNSDNTLIKEKL Sbjct: 252 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTLIKEKL 311 Query: 411 GWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 232 GWAPTM+LKDGLR TYFWIKEQ+EKE+ EG D++ YGSSKVV TQAPVQLGSLRAADGKE Sbjct: 312 GWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVVQTQAPVQLGSLRAADGKE 371
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 215 bits (547), Expect = 9e-56 Identities = 104/120 (86%), Positives = 111/120 (92%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 412 LTKSDF EPVNIGSDEMVSMNEMAE+VL FE+KKLPIHHIPGPEGVRGRNSDN LIKEKL Sbjct: 258 LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKL 317 Query: 411 GWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 232 GWAP M+LK+GLR TYFWIKEQIEKE+ +G DV+ YGSSKVV TQAPVQLGSLRAADGKE Sbjct: 318 GWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADGKE 377
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 3/83 (3%) Frame = -1 Query: 570 EPVNIGSDEMVSMNEMAEIV---LGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 400 E VN+GS V++ E+AE+V +GF+ K + P+G + D++ + LGW P Sbjct: 248 EHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKLAS-LGWTP 304 Query: 399 TMKLKDGLRFTYFWIKEQIEKER 331 + LKDGL TY W E + +++ Sbjct: 305 KISLKDGLSQTYEWYLENVVQKK 327
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%) Frame = -1 Query: 570 EPVNIGSDEMVSMNEMAEIV---LGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 400 E VN+GS V++ E+AE+V +GF+ K + P+G + D++ I+E +GW P Sbjct: 248 EHVNVGSGSEVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKIQE-MGWKP 304 Query: 399 TMKLKDGLRFTYFWIKEQI 343 + LK+GL TY W E + Sbjct: 305 KVPLKEGLVETYKWYVENV 323
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 45.8 bits (107), Expect = 9e-05 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Frame = -1 Query: 570 EPVNIGSDEMVSMNEMAEIV---LGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 400 E VNIGS + V++ E+AE+V +GFE K P+G + D++ + LGW P Sbjct: 234 EHVNIGSGQEVTIRELAELVKEVVGFEGKLG--WDCTKPDGTPRKLMDSSKLAS-LGWTP 290 Query: 399 TMKLKDGLRFTYFWIKEQI 343 + L+DGL TY W + + Sbjct: 291 KVSLRDGLSQTYDWYLKNV 309
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 43.5 bits (101), Expect = 5e-04 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Frame = -1 Query: 570 EPVNIGSDEMVSMNEMAEIVLGFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM 394 E VN+GS E V++ E+AE V G + + PEGV R D+ ++ KLGW P + Sbjct: 264 EHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRV 322 Query: 393 KLKDGLRFTY-FWIKEQ 346 L+DG++ Y F+++ + Sbjct: 323 ALRDGIQDLYRFYLRHE 339
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ E ++ E A+++ + I +P + + R D K Sbjct: 310 LMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLL 369 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIEKE 334 LGW P + L++GL T + ++E + Sbjct: 370 LGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.2 bits (82), Expect = 0.073 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIE 340 LGW P + L++GL + ++++E Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.2 bits (82), Expect = 0.073 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIE 340 LGW P + L++GL + ++++E Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.2 bits (82), Expect = 0.073 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIE 340 LGW P + L++GL + ++++E Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.2 bits (82), Expect = 0.073 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIE 340 LGW P + L++GL + ++++E Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 36.2 bits (82), Expect = 0.073 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -1 Query: 570 EPVNIGSDEMVSMNEMAEIV---LGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 400 E VNIG+ + S+NE+ +I+ +GF + + + EG R + E LGW P Sbjct: 228 EIVNIGTGKETSVNELFDIIKHEIGFRGEAI---YDKPREGEVYRIYLDIKKAESLGWKP 284 Query: 399 TMKLKDGLRFTYFWIK 352 + LK+G++ W+K Sbjct: 285 EIDLKEGIKRVVNWMK 300
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 35.0 bits (79), Expect = 0.16 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLG-FEDKKLPIHHIPGPEGVRGRNS-DNTLIKE 418 LTK E IG+D + E+ E++L K H+ G R + D+T ++E Sbjct: 241 LTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAIDSTKLRE 300 Query: 417 KLGWAPTM-KLKDGLRFTYFWIKE-----QIEKERTE 325 +LGW P ++GL T W E + EKE E Sbjct: 301 ELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVE 337
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 34.3 bits (77), Expect = 0.28 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = -1 Query: 591 LTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEK 415 L S+ PVN+G+ + S+ + A ++ I + + + R D K Sbjct: 313 LMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLL 372 Query: 414 LGWAPTMKLKDGLRFTYFWIKEQIEKE 334 LGW P + L++GL T + ++++E + Sbjct: 373 LGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic| region Length = 636 Score = 33.1 bits (74), Expect = 0.62 Identities = 27/95 (28%), Positives = 41/95 (43%) Frame = +2 Query: 299 DPYRATSFPSVLSFSICSLIQK*VNLRPSLSFIVGAQPSFSLMRVLSELRPRTPSGPGMW 478 D Y + P+ S+SI + PS+S P S + SE T + P + Sbjct: 101 DTYSSQYDPATSSYSI---------ITPSMSIFSSTSPMSSSSSITSEWSSLTSTTPTLS 151 Query: 479 WMGSFLSSKPRTISAISFMLTISSLPMFTGSQKSD 583 + LSS ++S+ S +L SSL + S SD Sbjct: 152 SSATSLSSSWSSLSSPSSLLVSSSLSLSLSSSYSD 186
>GFRA3_MOUSE (O35118) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 397 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -1 Query: 189 PNCPPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 37 PNC + SF C A P+C S HCHP +L +C S Sbjct: 243 PNCLDLRSF----------CRADPLCRSRLMDFQTHCHPMDILGTCATEQS 283
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 30.8 bits (68), Expect = 3.1 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Frame = -1 Query: 561 NIGSD---EMVSMNEMAEIVLGFEDKK--LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPT 397 NIG+ E++ + E LG E KK LP+ P V ++D + E +G+ P Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQ----PGDVLETSADTKALYEVIGFTPE 314 Query: 396 MKLKDGLRFTYFWIKE 349 +KDG++ W ++ Sbjct: 315 TTVKDGVKNFVNWYRD 330
>GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 400 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -1 Query: 189 PNC--PPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 37 PNC PP+ LE C + P+C S HCHP +L +C S Sbjct: 237 PNCALPPVAP---NCLELRRLCFSDPLCRSRLVDFQTHCHPMDILGTCATEQS 286
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -1 Query: 564 VNIGSDEMVSMNEMAEI---VLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM 394 +N+G+ ++ E+A+ V+G++ + + P+G + D T + + LGW + Sbjct: 243 INVGTGVDCTIRELAQTIAKVVGYKGRV--VFDASKPDGTPRKLLDVTRLHQ-LGWYHEI 299 Query: 393 KLKDGLRFTYFWIKEQIEKER 331 L+ GL TY W E ++ R Sbjct: 300 SLEAGLASTYQWFLENQDRFR 320
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 561 NIGSDEMVSMNEMAEIVLGFEDKKL-PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKL 388 NIG +S E+ ++L + ++ +G R + D+T I+ +LG+AP + L Sbjct: 240 NIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDL 299 Query: 387 KDGLRFTYFW 358 DGL T W Sbjct: 300 ADGLAATVAW 309
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 Query: 190 QWHNRPGVDMHSCLLLAVSRAEGAQLHRCLCGHHL 294 Q R G D H LL + AEGA+L C HHL Sbjct: 1974 QAFEREGKDEHRKGLLTMKMAEGAKLQMCYLLHHL 2008
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = +2 Query: 443 LRPRTPSGPGMWWMGSFLSSKPRTISAISFMLTISSLPMF-------TGSQKSDFV 589 + P+ P G WW+G ++ ++A+ F SLP + S+KS F+ Sbjct: 263 ITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSSEKSKFI 318
>ALCR_EMENI (P21228) Regulatory protein alcR| Length = 821 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 167 PSLRKHLRIAQPALPTPCVIQQILVLLFIVTPIN--YYHRVNRI 42 P H +I+QPA PC +Q L TP+ Y RV ++ Sbjct: 566 PDHESHTQISQPAARWPCTYEQAAAALSSATPVKVLLYRRVTQL 609
>PANC_NEIMA (P57035) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 278 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 366 YFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 232 Y W+ + +E R + +VAR G K+V A +LG+ R D E Sbjct: 231 YGWVVDYVEIRRVDTLEVARAGDKKLV-VLAAARLGTTRLIDNLE 274
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -1 Query: 495 KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYF------W----IKEQ 346 K +P+ I P G RG+N+D I +K G A + G R W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 345 IEKERTEGKDVA 310 ++ + +G+DV+ Sbjct: 89 LDSWKLDGRDVS 100
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = -1 Query: 501 EDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRF------TYFWIKEQIE 340 E+K LP IP G+RG + ++ I+EK K+K+ ++ TY W ++ Sbjct: 152 ENKPLPPVPIPNLVGIRGGDPEDNDIREK-----REKIKEMMKHAWDNYRTYGWGHNELR 206 Query: 339 KERTEGKDVARYGSSKVVST 280 +G +GSS++ +T Sbjct: 207 PIARKGHSPNIFGSSQMGAT 226
>GALE_MOUSE (Q8R059) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 29.3 bits (64), Expect = 8.9 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -1 Query: 573 CEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPT 397 C N+G+ S+ +M + + KK+P + EG V ++ +L E+LGW Sbjct: 263 CRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAA 322 Query: 396 MKLKDGLRFTYFWIKE 349 + L + W K+ Sbjct: 323 LGLDRMCEDLWRWQKQ 338
>EMR1_MOUSE (Q61549) EGF-like module-containing mucin-like hormone| receptor-like 1 precursor (Cell surface glycoprotein EMR1) (EMR1 hormone receptor) (Cell surface glycoprotein F4/80) Length = 931 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 Query: 112 THGVGRAGCAILKCFRNEGSDRWAIGQWHNRPGVDMHSCLLLAV 243 T+ +GRA C+ L+ F + W +G N D+ CL + + Sbjct: 99 TNILGRAKCSCLRGFSSSTGKDWILGSLDNFLCADVDECLTIGI 142
>ARLY_PROMA (Q7VEK0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 462 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = -1 Query: 405 APTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQL 262 A T+ L++GL F+ +KE +E + + DVA Y SK + + Q+ Sbjct: 341 AMTILLEEGLEFSLERLKETVEADFSNATDVADYLVSKNIPFREAYQI 388
>NOLK_AZOCA (P33217) Nodulation protein nolK| Length = 312 Score = 29.3 bits (64), Expect = 8.9 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 564 VNIGSD-EMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKL 388 V +G D ++ + V+G+ + ++ + P G+R + D T + LGW P L Sbjct: 237 VGVGKDLSVLEYYSLVARVIGWSGEF--VYDLNRPVGMRSKLMDITHLTA-LGWVPERSL 293 Query: 387 KDGLRFTY 364 + G+R TY Sbjct: 294 EGGIRSTY 301
>Y1298_PHOLL (Q7N760) UPF0247 protein plu1298| Length = 156 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 16/85 (18%) Frame = -1 Query: 516 IVLGFED------KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYF-- 361 I GF D K +P I P G RG+N+D I EK G + G R Sbjct: 16 IQAGFTDYLRRFPKDMPFDLIEIPAGKRGKNADIKRILEKEGEQMLAAVSKGSRIVTLDI 75 Query: 360 ----W----IKEQIEKERTEGKDVA 310 W + +Q+E + +G+DV+ Sbjct: 76 PGSRWETPQLAQQLEHWKRDGRDVS 100
>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Blood-brain barrier-specific anion transporter 1) (BBB-specific anion transporter type 1) Length = 716 Score = 29.3 bits (64), Expect = 8.9 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = +2 Query: 443 LRPRTPSGPGMWWMGSFLSSKPRTISAISFMLTISSLPMF-------TGSQKSDFV 589 + P+ P G WW+G ++ ++A+ F +LP + S+KS F+ Sbjct: 266 ITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLPRSQSREDSGSSSEKSKFI 321 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,361,868 Number of Sequences: 219361 Number of extensions: 1756619 Number of successful extensions: 5661 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5654 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
