ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27m23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IBP3_MOUSE (P47878) Insulin-like growth factor-binding protein 3... 28 4.7
2IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3... 28 4.7
3IBP3_PIG (P16611) Insulin-like growth factor-binding protein 3 p... 28 6.1
4CATW_MOUSE (P56203) Cathepsin W precursor (EC 3.4.22.-) (Lymphop... 28 8.0

>IBP3_MOUSE (P47878) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 223 CIXRYSSQCGPKGGSPK*EERMNSXNCACCYFHSCAL 113
           C  R  SQC P   +P   E +    C CC   +CAL
Sbjct: 42  CDARAVSQCAPPPTAPACTELVREPGCGCCL--TCAL 76



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>IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 223 CIXRYSSQCGPKGGSPK*EERMNSXNCACCYFHSCAL 113
           C  R  +QC P   SP   E +    C CC   +CAL
Sbjct: 43  CDARAVAQCAPPPPSPPCAELVREPGCGCCL--TCAL 77



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>IBP3_PIG (P16611) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 293

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 223 CIXRYSSQCGPKGGSPK*EERMNSXNCACCYFHSCAL 113
           C  R  +QC P   +P   E +    C CC   +CAL
Sbjct: 43  CDARALAQCAPPPAAPPCAELVREPGCGCCL--TCAL 77



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>CATW_MOUSE (P56203) Cathepsin W precursor (EC 3.4.22.-) (Lymphopain)|
          Length = 371

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 157 NSXNCACCYFHSCALXSYNDL*LWRLNYXLYADLSIQR-EDHSNCXN 20
           N  +C CC+  + A    N   LWR+ +  + D+S+Q   D   C N
Sbjct: 144 NQGSCKCCWAMAAA---DNIQALWRIKHQQFVDVSVQELLDCERCGN 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,995,031
Number of Sequences: 219361
Number of extensions: 521668
Number of successful extensions: 1070
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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