| Clone Name | rbags28b14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 956 Score = 121 bits (61), Expect = 2e-24 Identities = 89/100 (89%) Strand = Plus / Minus Query: 259 ggcgggggagcttacgggttcaccttnggcgcccacccggcgatcaggttcttnttggtc 318 |||||| | |||||||||||||| || ||||||||||||||||||||||||| |||||| Sbjct: 724 ggcgggagggcttacgggttcactttcggcgcccacccggcgatcaggttctccttggtc 665 Query: 319 ggcttggtcttgannaacgactcgtggntgaagagagcct 358 | ||||||||||| ||||||||| || |||||||||||| Sbjct: 664 gccttggtcttgacgaacgactcgcggctgaagagagcct 625 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 aggctcgctcgcattattccaa 170 |||||||||||||||||||||| Sbjct: 806 aggctcgctcgcattattccaa 785
>gb|DQ090998.1| Puccinellia tenuiflora dehydroascorbate reductase protein mRNA, partial cds Length = 202 Score = 85.7 bits (43), Expect = 9e-14 Identities = 80/94 (85%) Strand = Plus / Minus Query: 268 gcttacgggttcaccttnggcgcccacccggcgatcaggttcttnttggtcggcttggtc 327 |||||||||||||| || |||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 200 gcttacgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtc 141 Query: 328 ttgannaacgactcgtggntgaagagagccttgg 361 |||| || || || || |||| |||||||||| Sbjct: 140 ttgacgaaggattcccggctgaacagagccttgg 107
>gb|DQ093638.1| Eustoma grandiflorum dehydroascorbate reductase protein mRNA, partial cds Length = 195 Score = 75.8 bits (38), Expect = 9e-11 Identities = 75/89 (84%) Strand = Plus / Minus Query: 273 cgggttcaccttnggcgcccacccggcgatcaggttcttnttggtcggcttggtcttgan 332 ||||||||| || |||||||| |||||||||||||||| ||||| ||||||||||||| Sbjct: 195 cgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtcttgac 136 Query: 333 naacgactcgtggntgaagagagccttgg 361 || || || || |||| |||||||||| Sbjct: 135 gaaggattcccggctgaacagagccttgg 107
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ggggcatgacagtccacgcag 112 ||||||||||||||||||||| Sbjct: 2056020 ggggcatgacagtccacgcag 2056000
>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence Length = 161430 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 caggcagagcacacagcaga 149 |||||||||||||||||||| Sbjct: 111810 caggcagagcacacagcaga 111829
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctcgcattattccaaaccca 175 |||||||||||||||||||| Sbjct: 28852 ctcgcattattccaaaccca 28833 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,334,313 Number of Sequences: 3902068 Number of extensions: 1334313 Number of successful extensions: 24459 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24446 Number of HSP's gapped (non-prelim): 13 length of query: 361 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 339 effective length of database: 17,147,199,772 effective search space: 5812900722708 effective search space used: 5812900722708 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)