>ENH4_HUMAN (Q96L62) HERV-H_1q41 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein HERV-Hcl.7)
           [Contains: Surface protein (SU); Transmembrane protein
           (TM)]
          Length = 402

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 34  GKRIPCILCFFSINVPCLRVDQPRPDSCMPSLPASHSHSGMLL 162
           G+ +PCI     ++ PC     PRP SC+  +P+  ++S  LL
Sbjct: 230 GRHVPCISLHPWLSSPCSSDSPPRPSSCL-LIPSPENNSERLL 271

>ENH1_HUMAN (Q9N2K0) HERV-H_2q24.3 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein HERV-H/p62) (Env
           protein HERV-H19) (HERV-H/env62) (Env protein
           HERV-Hcl.3) [Contains: Surface protein (SU);
           Transmembrane protein (TM)]
          Length = 584

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 34  GKRIPCILCFFSINVPCLRVDQPRPDSCMPSLPASHSHSGMLL 162
           G+ +PCI     ++ PC     PRP SC+  +P+  ++S  LL
Sbjct: 230 GRHLPCISLHPWLSSPCSSDSPPRPSSCL-LIPSPENNSERLL 271

>ENH1_PANTR (P61559) ERV-H1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein) (ERV-H/env62)
           [Contains: Surface protein (SU); Transmembrane protein
           (TM)]
          Length = 457

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 34  GKRIPCILCFFSINVPCLRVDQPRPDSCMPSLPASHSHSGMLL 162
           G+ +PCI     +  PC     PRP SC+  +P+  ++S  LL
Sbjct: 230 GRHLPCISLHPWLPSPCSSDCPPRPSSCL-LIPSPENNSESLL 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,239,332
Number of Sequences: 219361
Number of extensions: 473239
Number of successful extensions: 1193
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)