| Clone Name | rbags27m11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY442329.1| Triticum aestivum phytochelatin synthetase mRNA, complete cds Length = 1571 Score = 200 bits (101), Expect = 3e-48 Identities = 230/273 (84%) Strand = Plus / Minus Query: 243 cagtccagaacaccaagagctcgagcgtccacggtttcttcatcagagggctcgcgttag 302 |||||||||||||||| || ||||||||| |||| || |||||||||| || ||| Sbjct: 1527 cagtccagaacaccaatagtgggagcgtccatggttgttttgtcagagggcttgcactag 1468 Query: 303 gcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacacac 362 ||| |||||||||| | ||||| | |||||||| ||||| || || ||||||||||||| Sbjct: 1467 gcaaccatggatagtcatcgggagatggcatgacacagttatcaccattgaagtacacac 1408 Query: 363 gccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttctgcagaagta 422 |||| || || ||||||||||| | ||||||||| |||||| ||||||| ||| |||| Sbjct: 1407 gccggggaaacgcccatcctttttggaaggtgaaagtctccgagtccttccgcatgagta 1348 Query: 423 tttccgtctgcgcgtttccgaacggaccagcttgattgagcaggtcattgtagaacttca 482 ||| | |||||||||||| | ||| |||||||||||||||| |||||||||||||||| Sbjct: 1347 gttctgactgcgcgtttccaagcgggccagcttgattgagcaaatcattgtagaacttca 1288 Query: 483 ttccccagaacatcgcgctgtcatttatgcggc 515 ||||||||||||| ||| ||||||||||||||| Sbjct: 1287 ttccccagaacattgcggtgtcatttatgcggc 1255
>gb|AY244505.1| Hordeum vulgare subsp. vulgare phytochelatin synthetase (PCS2) gene, partial cds Length = 419 Score = 131 bits (66), Expect = 2e-27 Identities = 150/178 (84%) Strand = Plus / Minus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| ||||| || || ||||||||||||||||| || || ||||||||||||| | Sbjct: 397 ggcatgacacagttatcaccattgaagtacacacgccgaggaaacgcccatcctttctgg 338 Query: 389 aaggtgaagatctccgggtccttctgcagaagtatttccgtctgcgcgtttccgaacgga 448 |||||||| |||| | ||||||| || |||| || | |||| ||||||| | |||| Sbjct: 337 aaggtgaaagtctctgagtccttccacatgagtagctctgactgcacgtttccaagcgga 278 Query: 449 ccagcttgattgagcaggtcattgtagaacttcattccccagaacatcgcgctgtcat 506 |||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 277 ccagcttgattgagcaaatcattgtagaacttctttccccagaacattgcggtgtcat 220
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 131 bits (66), Expect = 2e-27 Identities = 150/178 (84%) Strand = Plus / Minus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| ||||| || || ||||||||||||||||| || || ||||||||||||| | Sbjct: 4451 ggcatgacacagttatcaccattgaagtacacacgccgaggaaacgcccatcctttctgg 4392 Query: 389 aaggtgaagatctccgggtccttctgcagaagtatttccgtctgcgcgtttccgaacgga 448 |||||||| |||| | ||||||| || |||| || | |||| ||||||| | |||| Sbjct: 4391 aaggtgaaagtctctgagtccttccacatgagtagctctgactgcacgtttccaagcgga 4332 Query: 449 ccagcttgattgagcaggtcattgtagaacttcattccccagaacatcgcgctgtcat 506 |||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 4331 ccagcttgattgagcaaatcattgtagaacttctttccccagaacattgcggtgtcat 4274
>dbj|AK102170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086I06, full insert sequence Length = 2117 Score = 81.8 bits (41), Expect = 2e-12 Identities = 167/209 (79%) Strand = Plus / Minus Query: 287 agagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcg 346 |||||||| || ||||||| ||||||||| || || || || |||||||| || ||||| Sbjct: 1667 agagggcttgcattaggcaaccatggatatgcatctggaggtggcatgacacaattgtca 1608 Query: 347 ccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccggg 406 || |||||||||||||| | |||||||||||||| || || |||||||| | | Sbjct: 1607 ccattgaagtacacacggtgggggaaggcccatcccttgtcaaaggtgaaagccatagaa 1548 Query: 407 tccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagcagg 466 |||||| ||||||||| ||| | |||||| ||||| | || |||||||| |||||| Sbjct: 1547 tccttccgcagaagtagttctgactgcgcatttccaagtgggccagcttgcatgagcaaa 1488 Query: 467 tcattgtagaacttcattccccagaacat 495 || ||||||||||| | |||||||||||| Sbjct: 1487 tcgttgtagaactttactccccagaacat 1459
>gb|BT017121.1| Zea mays clone EL01N0364E04.c mRNA sequence Length = 378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 296 gcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaag 355 ||||| |||||||| || |||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 68 gcgttgggcagccacgggtaggcgtccggcggcggcatcacgcagttgtctccgttgaag 9
>ref|XM_479084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1682 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 302 ggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacaca 361 |||||||||||||| || || || || ||||| || |||||||| || |||||||| ||| Sbjct: 1397 ggcagccatggatatgcatctggtggtggcatcacacagttgtcaccattgaagtataca 1338 Query: 362 cgccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttct 413 || | ||||||||||| |||||||| |||||||| ||| |||||||||| Sbjct: 1337 cgtcttgggaaggcccagcctttctcaaaggtgaaactcttggggtccttct 1286
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 302 ggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacaca 361 |||||||||||||| || || || || ||||| || |||||||| || |||||||| ||| Sbjct: 24701429 ggcagccatggatatgcatctggtggtggcatcacacagttgtcaccattgaagtataca 24701370 Query: 362 cgccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttct 413 || | ||||||||||| |||||||| |||||||| ||| |||||||||| Sbjct: 24701369 cgtcttgggaaggcccagcctttctcaaaggtgaaactcttggggtccttct 24701318
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 302 ggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacaca 361 |||||||||||||| || || || || ||||| || |||||||| || |||||||| ||| Sbjct: 57366 ggcagccatggatatgcatctggtggtggcatcacacagttgtcaccattgaagtataca 57307 Query: 362 cgccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttct 413 || | ||||||||||| |||||||| |||||||| ||| |||||||||| Sbjct: 57306 cgtcttgggaaggcccagcctttctcaaaggtgaaactcttggggtccttct 57255
>dbj|AK121884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104P13, full insert sequence Length = 1709 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 302 ggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacaca 361 |||||||||||||| || || || || ||||| || |||||||| || |||||||| ||| Sbjct: 1402 ggcagccatggatatgcatctggtggtggcatcacacagttgtcaccattgaagtataca 1343 Query: 362 cgccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttct 413 || | ||||||||||| |||||||| |||||||| ||| |||||||||| Sbjct: 1342 cgtcttgggaaggcccagcctttctcaaaggtgaaactcttggggtccttct 1291
>dbj|AK101860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070A18, full insert sequence Length = 1682 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 302 ggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaagtacaca 361 |||||||||||||| || || || || ||||| || |||||||| || |||||||| ||| Sbjct: 1397 ggcagccatggatatgcatctggtggtggcatcacacagttgtcaccattgaagtataca 1338 Query: 362 cgccgcgggaaggcccatcctttctcgaaggtgaagatctccgggtccttct 413 || | ||||||||||| |||||||| |||||||| ||| |||||||||| Sbjct: 1337 cgtcttgggaaggcccagcctttctcaaaggtgaaactcttggggtccttct 1286
>ref|NM_113910.2| Arabidopsis thaliana unknown protein AT3G29810 mRNA, complete cds Length = 1502 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 296 gcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaag 355 ||||| || ||||||||||| | ||| || || ||||| |||||||| || ||||||||| Sbjct: 1348 gcgtttggaagccatggataagagtctggaggtggcataacgcagttatcaccgttgaag 1289 Query: 356 tacacacgccgcgggaaggcccatcctttctcgaaggtgaa 396 || | |||| ||| || ||||||||||||||||| ||||| Sbjct: 1288 tatatgcgcctcggaaacgcccatcctttctcgaatgtgaa 1248 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccagaacatcgcgctgtcatttatg 511 |||||||||||||| |||||||| | ||| || ||||||||||| Sbjct: 1177 tcattgtagaacttgattccccatagcatggccgtgtcatttatg 1133
>gb|AC027033.3|AC027033 Arabidopsis thaliana chromosome 1 BAC F21N10 genomic sequence, complete sequence Length = 98017 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 296 gcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaag 355 ||||| || ||||||||||| | ||| || || ||||| |||||||| || ||||||||| Sbjct: 33691 gcgtttggaagccatggataagagtctggaggtggcataacgcagttatcaccgttgaag 33632 Query: 356 tacacacgccgcgggaaggcccatcctttctcgaaggtgaa 396 || | |||| ||| || ||||||||||||||||| ||||| Sbjct: 33631 tatatgcgcctcggaaacgcccatcctttctcgaatgtgaa 33591
>gb|AY088873.1| Arabidopsis thaliana clone 98007 mRNA, complete sequence Length = 1503 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 296 gcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaag 355 ||||| || ||||||||||| | ||| || || ||||| |||||||| || ||||||||| Sbjct: 1348 gcgtttggaagccatggataagagtctggaggtggcataacgcagttatcaccgttgaag 1289 Query: 356 tacacacgccgcgggaaggcccatcctttctcgaaggtgaa 396 || | |||| ||| || ||||||||||||||||| ||||| Sbjct: 1288 tatatgcgcctcggaaacgcccatcctttctcgaatgtgaa 1248 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccagaacatcgcgctgtcatttatg 511 |||||||||||||| |||||||| | ||| || ||||||||||| Sbjct: 1177 tcattgtagaacttgattccccatagcatggccgtgtcatttatg 1133
>dbj|AP000736.3| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E7 Length = 81580 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 296 gcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgtcgccgttgaag 355 ||||| || ||||||||||| | ||| || || ||||| |||||||| || ||||||||| Sbjct: 46800 gcgtttggaagccatggataagagtctggaggtggcataacgcagttatcaccgttgaag 46741 Query: 356 tacacacgccgcgggaaggcccatcctttctcgaaggtgaa 396 || | |||| ||| || ||||||||||||||||| ||||| Sbjct: 46740 tatatgcgcctcggaaacgcccatcctttctcgaatgtgaa 46700
>gb|BT019241.1| Zea mays clone Contig914.F mRNA sequence Length = 794 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| || || ||||| ||||||||||| || || |||||||||||||| || ||| Sbjct: 481 ggcatgacacaattatcgccattgaagtacactcggcgtgggaaggcccatcccttttcg 540 Query: 389 aaggtgaa 396 |||||||| Sbjct: 541 aaggtgaa 548
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Plus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 50646 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 50705 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 50706 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 50765 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 50766 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 50825 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 50826 aatcgttatagaacttaactccccagaacatcgc 50859
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Plus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 18577531 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 18577590 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 18577591 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 18577650 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 18577651 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 18577710 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 18577711 aatcgttatagaacttaactccccagaacatcgc 18577744
>dbj|AK067864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126A02, full insert sequence Length = 2221 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Plus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 282 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 341 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 342 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 401 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 402 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 461 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 462 aatcgttatagaacttaactccccagaacatcgc 495
>dbj|AK066508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068L12, full insert sequence Length = 1365 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Plus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 281 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 340 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 341 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 400 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 401 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 460 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 461 aatcgttatagaacttaactccccagaacatcgc 494
>dbj|AK065501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026K11, full insert sequence Length = 3797 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Plus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 1332 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 1391 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 1392 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 1451 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 1452 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 1511 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 1512 aatcgttatagaacttaactccccagaacatcgc 1545
>dbj|AK062748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F11, full insert sequence Length = 706 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Minus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 426 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 367 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 366 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 307 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 306 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 247 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 246 aatcgttatagaacttaactccccagaacatcgc 213
>dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D01, full insert sequence Length = 1765 Score = 60.0 bits (30), Expect = 8e-06 Identities = 168/214 (78%) Strand = Plus / Minus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 1485 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 1426 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaagatctccg 404 | || ||||||||||| || | |||||||||||||| || || ||||||||| || | Sbjct: 1425 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaagtccttgg 1366 Query: 405 ggtccttctgcagaagtatttccgtctgcgcgtttccgaacggaccagcttgattgagca 464 ||||| ||||||| | ||| | ||| || ||||| | ||||||||||| |||||| Sbjct: 1365 aatccttacgcagaagaagttctgactgtgcatttccaagtggaccagcttgcatgagca 1306 Query: 465 ggtcattgtagaacttcattccccagaacatcgc 498 || || |||||||| | ||||||||||||||| Sbjct: 1305 aatcgttatagaacttaactccccagaacatcgc 1272
>dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D22, full insert sequence Length = 2028 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 285 tcagagggctcgcgttaggcagccatggataggcgtcgggcggcggcatgacgcagttgt 344 ||||||| || || ||||||| ||||||||| || || || || |||||||| || || | Sbjct: 1562 tcagaggacttgcattaggcaaccatggatatgcatccggaggtggcatgacacaattat 1503 Query: 345 cgccgttgaagtacacacgccgcgggaaggcccatcctttctcgaaggtgaag 397 | || ||||||||||| || | |||||||||||||| || || ||||||||| Sbjct: 1502 caccattgaagtacacgcggtgtgggaaggcccatcccttgtcaaaggtgaag 1450
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin synthetase-like protein 2, and cytochrome b5 (Cyb5) genes, complete cds; and MADS box protein AGLG1 (Aglg1) gene, partial cds Length = 23102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| ||||| || || ||||||||||| || || |||||||||||||| || ||| Sbjct: 4911 ggcatgacacagttatcaccattgaagtacacccggcgtgggaaggcccatcccttttcg 4852 Query: 389 aaggtgaa 396 || ||||| Sbjct: 4851 aatgtgaa 4844 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| || || || || ||||||||||| || || ||||||||||| || || ||| Sbjct: 11640 ggcatgacacaattatcaccattgaagtacacccggcgtgggaaggcccaccccttatcg 11581 Query: 389 aaggtgaa 396 |||||||| Sbjct: 11580 aaggtgaa 11573
>gb|BT013422.1| Lycopersicon esculentum clone 132061R, mRNA sequence Length = 1858 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 437 tttccgaacggaccagcttgattgagcaggtcattgtagaacttcattccccagaacatc 496 ||||| || ||||||||||| ||||||| || |||||||| ||||| ||||||| ||| Sbjct: 1211 tttcctaatggaccagcttgcatgagcagatcgttgtagaatttcataccccagagcata 1152 Query: 497 gcgctgtcatttat 510 || |||||||||| Sbjct: 1151 gcagtgtcatttat 1138
>ref|XM_473354.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1320 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 323 ggcggcggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcc 381 ||||| ||||||||||| | || ||||| ||||||||| | || |||||| |||||||| Sbjct: 1211 ggcggtggcatgacgcactcgtggccgtcgaagtacaccctcctcgggaacgcccatcc 1153
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 323 ggcggcggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcc 381 ||||| ||||||||||| | || ||||| ||||||||| | || |||||| |||||||| Sbjct: 75841 ggcggtggcatgacgcactcgtggccgtcgaagtacaccctcctcgggaacgcccatcc 75783
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 323 ggcggcggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcc 381 ||||| ||||||||||| | || ||||| ||||||||| | || |||||| |||||||| Sbjct: 27008140 ggcggtggcatgacgcactcgtggccgtcgaagtacaccctcctcgggaacgcccatcc 27008082
>ref|NM_197178.1| Oryza sativa (japonica cultivar-group) putative phytochelatin synthetase (OSJNBa0017E08.5), mRNA Length = 1278 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ggcggcatgacgcagttgtcgccgttgaagtacacacg 363 |||||||| || ||||| || ||||||||||||||||| Sbjct: 1244 ggcggcatcacacagttatcaccgttgaagtacacacg 1207
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 326 ggcggcatgacgcagttgtcgccgttgaagtacacacg 363 |||||||| || ||||| || ||||||||||||||||| Sbjct: 43870 ggcggcatcacacagttatcaccgttgaagtacacacg 43907
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ggcggcatgacgcagttgtcgccgttgaagtacacacg 363 |||||||| || ||||| || ||||||||||||||||| Sbjct: 18462823 ggcggcatcacacagttatcaccgttgaagtacacacg 18462786
>dbj|AK071225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K13, full insert sequence Length = 1574 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ggcggcatgacgcagttgtcgccgttgaagtacacacg 363 |||||||| || ||||| || ||||||||||||||||| Sbjct: 1314 ggcggcatcacacagttatcaccgttgaagtacacacg 1277
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 ggcggcatgacgcagttgtcgccgttgaagtacacacg 363 |||||||| || ||||| || ||||||||||||||||| Sbjct: 18472876 ggcggcatcacacagttatcaccgttgaagtacacacg 18472839
>ref|NM_125485.2| Arabidopsis thaliana COB (COBRA) AT5G60920 (COB) mRNA, complete cds Length = 1837 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 1317 ttgtagaacttcactccccataacatcgc 1289
>ref|NM_111088.3| Arabidopsis thaliana unknown protein AT3G02210 mRNA, complete cds Length = 1684 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccaga 491 |||||||||||||| |||||||||| Sbjct: 1283 tcattgtagaactttattccccaga 1259
>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence Length = 152112 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ggaccagcttgattgagcagg 466 ||||||||||||||||||||| Sbjct: 55229 ggaccagcttgattgagcagg 55209
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccaga 491 |||||||||||||| |||||||||| Sbjct: 65279 tcattgtagaactttattccccaga 65255
>gb|AY094402.1| Arabidopsis thaliana AT5g60920/MSL3_40 mRNA, complete cds Length = 1676 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 1228 ttgtagaacttcactccccataacatcgc 1200
>gb|AF319663.1|AF319663 Arabidopsis thaliana putative glycosylphosphatidylinositol-anchored protein (COB) gene, complete cds Length = 2736 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 2352 ttgtagaacttcactccccataacatcgc 2324
>emb|BX824795.1|CNS0A4TT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1660 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccaga 491 |||||||||||||| |||||||||| Sbjct: 1283 tcattgtagaactttattccccaga 1259
>emb|BX830769.1|CNS0A0N0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1682 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 1290 ttgtagaacttcactccccataacatcgc 1262
>gb|BT005373.1| Arabidopsis thaliana At3g02210 mRNA, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccaga 491 |||||||||||||| |||||||||| Sbjct: 1109 tcattgtagaactttattccccaga 1085
>gb|AY085712.1| Arabidopsis thaliana clone 17250 mRNA, complete sequence Length = 1715 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 1318 ttgtagaacttcactccccataacatcgc 1290
>dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSL3 Length = 61634 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 22287 ttgtagaacttcactccccataacatcgc 22315
>dbj|AK118555.1| Arabidopsis thaliana At3g02210 mRNA for predicted GPI-anchored protein (by homology), complete cds, clone: RAFL19-78-D11 Length = 1575 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 tcattgtagaacttcattccccaga 491 |||||||||||||| |||||||||| Sbjct: 1174 tcattgtagaactttattccccaga 1150
>emb|AJ006787.1|ATH6787 Arabidopsis thaliana mRNA for putative phytochelatin synthetase Length = 1329 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 904 ttgtagaacttcactccccataacatcgc 876
>gb|BT001119.1| Arabidopsis thaliana At5g60920/MSL3_40 mRNA, complete cds Length = 1371 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 ttgtagaacttcattccccagaacatcgc 498 ||||||||||||| |||||| |||||||| Sbjct: 1121 ttgtagaacttcactccccataacatcgc 1093
>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence Length = 218949 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ggaccagcttgattgagcagg 466 ||||||||||||||||||||| Sbjct: 40801 ggaccagcttgattgagcagg 40821
>gb|AC183801.3| Pan troglodytes BAC clone CH251-162F3 from chromosome 19, complete sequence Length = 193838 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tacatttttggccctattta 82 |||||||||||||||||||| Sbjct: 21194 tacatttttggccctattta 21213
>gb|AC116570.3| Mus musculus BAC clone RP23-93O1 from chromosome 1, complete sequence Length = 213410 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tgattgagcaggtcattgta 474 |||||||||||||||||||| Sbjct: 165032 tgattgagcaggtcattgta 165013
>emb|AL356858.19| Human DNA sequence from clone RP11-357K9 on chromosome Xp11.4-21.2 Contains the PRRG1 gene for proline-rich Gla (G-carboxyglutamic acid) polypetide 1, a ferritin heavy polypeptide-like 17 (FTHL17) pseudogene and a CpG island, complete sequence Length = 128968 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ttttggccctatttaactta 87 |||||||||||||||||||| Sbjct: 106637 ttttggccctatttaactta 106618
>gb|AC005392.2| Homo sapiens chromosome 19 clone CTC-490G23, complete sequence Length = 243197 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tacatttttggccctattta 82 |||||||||||||||||||| Sbjct: 17160 tacatttttggccctattta 17141
>gb|AC024077.2| Homo sapiens chromosome 19 clone LLNL-F_204C10, complete sequence Length = 42649 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tacatttttggccctattta 82 |||||||||||||||||||| Sbjct: 31875 tacatttttggccctattta 31894
>emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in linkage group 14, complete sequence Length = 95848 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 ttgattgagcaggtcattgtagaa 477 |||||||||||||||||| ||||| Sbjct: 17081 ttgattgagcaggtcattatagaa 17058
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ccagaagctcgccgacatcg 206 |||||||||||||||||||| Sbjct: 266400 ccagaagctcgccgacatcg 266419
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagcagggtggccagcgc 243 |||||||||||||||||||| Sbjct: 3527642 gccagcagggtggccagcgc 3527623
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagcagggtggccagcgc 243 |||||||||||||||||||| Sbjct: 3308555 gccagcagggtggccagcgc 3308574
>gb|AC133462.18| Mus musculus chromosome 1, clone RP24-441D8, complete sequence Length = 140132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 tgattgagcaggtcattgta 474 |||||||||||||||||||| Sbjct: 86524 tgattgagcaggtcattgta 86543
>gb|AF160475.1|AF160475 Zea mays phytochelatin synthetase-like protein (CISEZmG) mRNA, complete cds Length = 1407 Score = 40.1 bits (20), Expect = 7.0 Identities = 56/68 (82%) Strand = Plus / Minus Query: 329 ggcatgacgcagttgtcgccgttgaagtacacacgccgcgggaaggcccatcctttctcg 388 |||||||| || || || || |||||||| || || || |||||||||||||| || ||| Sbjct: 988 ggcatgacacaattatcaccattgaagtaaactcggcgtgggaaggcccatcccttttcg 929 Query: 389 aaggtgaa 396 || ||||| Sbjct: 928 aaagtgaa 921
>gb|M12381.1|MUSMHH2DP Mouse MHC class I H2D-P gene, complete cds Length = 4968 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcttggcggccactacattt 69 |||||||||||||||||||| Sbjct: 2086 gcttggcggccactacattt 2105
>emb|AJ320452.1|TAN320452 Tylophora anomala 18S rRNA gene (partial), 5.8S rRNA gene, 26S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Meve 916b (K, MSUN) Length = 662 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gccgcgggaaggcccatcct 382 |||||||||||||||||||| Sbjct: 187 gccgcgggaaggcccatcct 168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,355,956 Number of Sequences: 3902068 Number of extensions: 4355956 Number of successful extensions: 80358 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79721 Number of HSP's gapped (non-prelim): 635 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)